Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O24
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   2.9  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.8  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   8.7  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   8.7  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   8.7  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   8.7  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 242 IYSNCCRGIQQPHLCR 195
           I  NC R + +PH+CR
Sbjct: 28  IKCNCKRHVIKPHICR 43


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 204 LV*NVIACRVKTIVDYS*KKSSKNNLETETCSILCINLI 88
           L+ NVI    + I D      S NNL  E    + +NLI
Sbjct: 327 LIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLI 365


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -1

Query: 204 LV*NVIACRVKTIVDYS*KKSSKNNLETETCSILCINLI 88
           L+ NVI    + I D      S NNL  E    + +NLI
Sbjct: 342 LIENVIPSNEELICDKRFVDESANNLSIEELDFVKLNLI 380


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 783 FPLKPYLTIVLLHILNFLVYSLYNKLPLSTPHSI*ETLS 667
           FPL    TI+   I   ++  +Y ++ L   +S  +TL+
Sbjct: 210 FPLYELSTIIFFLIPMLIILVVYTRMGLKIRNSTKDTLN 248


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 693 PHSI*ETLSYLFVSFVLSQRPCTSHQTFHDNTV 595
           P ++ +   YLF  +  + RP +SHQ  ++ T+
Sbjct: 41  PTTLLKLKRYLFCEYDPNVRPISSHQIANNVTM 73


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 492 FHFLDAPKEALQCFEEPANDGFFDQQVSYQILLD 593
           F FL   K      E P N G +DQ ++ + L D
Sbjct: 202 FGFLYLNKHFTNSEEAPGNMGLWDQALALRWLRD 235


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 492 FHFLDAPKEALQCFEEPANDGFFDQQVSYQILLD 593
           F FL   K      E P N G +DQ ++ + L D
Sbjct: 202 FGFLYLNKHFTNSEEAPGNMGLWDQALALRWLRD 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,283
Number of Sequences: 438
Number of extensions: 5851
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)