Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O15
         (426 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    39   2e-05
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   2.9  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   5.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   5.0  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    20   8.7  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    20   8.7  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   8.7  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 39.1 bits (87), Expect = 2e-05
 Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
 Frame = +1

Query: 52  PDWGGKRAAIAGTVSCRND-ESLASIYKLIQNEAEKLLLCQK 174
           P+WG KRA    +  C+   +++  IYK+IQNEA+KL+ C+K
Sbjct: 25  PNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQKLVDCEK 65


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 11/48 (22%), Positives = 20/48 (41%)
 Frame = +1

Query: 31  KPNSLSHPDWGGKRAAIAGTVSCRNDESLASIYKLIQNEAEKLLLCQK 174
           KP +   P+ G +   +        D S  S+Y    ++  KL+  Q+
Sbjct: 426 KPQTTKTPESGNESDGVCTKEGIVRDPSDCSVYYTCVSDGSKLVSIQR 473


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 118 PRIHRSCRTQC 86
           P++H  CR++C
Sbjct: 79  PQLHNLCRSEC 89


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 51  SRLGWKEGCHRRHCVLQER 107
           SR G +    + HC+LQE+
Sbjct: 76  SRYGRRSNWFKIHCLLQEQ 94


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 118 PRIHRSCRTQCRR 80
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 118 PRIHRSCRTQCRR 80
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 156 TPAMPEALSRH 188
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,258
Number of Sequences: 336
Number of extensions: 1493
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)