Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O15
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   3.4  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   4.5  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.0  

>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
 Frame = +3

Query: 87  HCVLQ-ER*ILGVYL*TYSE*-S*KTPAMPEALSRHHRNRNTDKMPFNHYI 233
           HCV + +R  + V L  Y +  + +TPA+  A++   R+R+ D+  +NH I
Sbjct: 50  HCVRRLKRNKIRVILGDYDQFVASETPAIMRAVTAIIRHRSFDQNSYNHDI 100


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 177 LSRHHRNRNTDKMPFNHYIIFS*SLKCI 260
           L+ HHRN +T +M     +IF   L CI
Sbjct: 331 LNYHHRNADTHEMSDWVRVIFLYWLPCI 358


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 101 LQDTVPAMAALFPPQSGCESELGFGHYEA 15
           L  + PA A   PP S  ES   +GH  A
Sbjct: 295 LAGSSPAAAPPSPPTSAGESNHYYGHIRA 323


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,842
Number of Sequences: 2352
Number of extensions: 6053
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)