Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O14
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical p... 188 5e-48
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine re... 31 1.5
AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine re... 31 1.5
AF025457-10|AAB70972.1| 148|Caenorhabditis elegans Hypothetical... 30 2.6
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 29 5.9
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 29 5.9
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 29 5.9
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 29 5.9
U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical pr... 28 7.8
U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical pr... 28 7.8
>Z46787-13|CAA86748.1| 281|Caenorhabditis elegans Hypothetical
protein C16C10.10 protein.
Length = 281
Score = 188 bits (458), Expect = 5e-48
Identities = 94/218 (43%), Positives = 132/218 (60%), Gaps = 1/218 (0%)
Frame = +1
Query: 169 VSGRALHFVFKVADRTLTAKFYREILGMKVLRHEEFSEGCEAACNGPYANRWSKTMVGYG 348
++ RALH+VFKVA+R T F+ +L MKVLRHEEF +GCEA CNGPY RWSKTM+GYG
Sbjct: 1 MTARALHYVFKVANRAKTIDFFTNVLNMKVLRHEEFEKGCEATCNGPYNGRWSKTMIGYG 60
Query: 349 PEDTHFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTNNWPIKEHNGLKYVEAPGG 528
ED HFV+E+TYNY + YE GND+ I + S + ++ + N K G V+ P G
Sbjct: 61 SEDEHFVLEITYNYPIHKYELGNDYRAIVIDSDQLFEKVEKINHR-KSGCGRLAVKDPDG 119
Query: 529 YKFYIVDKPQPVDKDP-IVKVSLASSNLAKSIAYWNGLLTLKLYEKTDKTALLGYSDDQA 705
++F K D+ P +++V + +L KS YWN L + + E+ + Y D Q
Sbjct: 120 HEF----KIGKADQSPKVLRVQVNVGDLEKSKKYWNETLGMPIVEEKSSRIRMSYGDGQC 175
Query: 706 KLELVDIGGPINRARAYGRIAFSCPFDEQPVIDKKIQT 819
+LE+V I+R +GRIAFS P D+ + KI++
Sbjct: 176 ELEIVKSQDKIDRKTGFGRIAFSYPEDKLESLQDKIKS 213
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 361 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 474
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 361 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 474
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +1
Query: 361 HFVVELTYNYGVTHYEQGNDFLGITVQSSESLKRAQTN 474
H +++L +N H + GND++ +SSE ++A N
Sbjct: 1414 HKIIDLHFNIPKDHEDYGNDYVPFGTESSEESQKADGN 1451
>AC024779-2|AAK68485.1| 299|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform a protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -3
Query: 321 SVCIRSIASCLTSFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 154
++ IR + S SF +L ++++ HS F F SP+C F E+ T ++ F
Sbjct: 7 ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 63
Query: 153 QL*AYDFSSELSDLC 109
L AYD S+ S LC
Sbjct: 64 LLIAYDIST-YSHLC 77
>AC024779-1|AAP86615.1| 304|Caenorhabditis elegans Serpentine
receptor, class x protein50, isoform b protein.
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = -3
Query: 321 SVCIRSIASCLTSFTKLFMAENL----HSEDFPIKFCC*SPICDFKYEMKSTTANHFAI* 154
++ IR + S SF +L ++++ HS F F SP+C F E+ T ++ F
Sbjct: 18 ALLIRRLPSLKNSFGRLTASQSIGDAIHSTVFAFIF---SPMCFFSVEIMKTYSSAFGHI 74
Query: 153 QL*AYDFSSELSDLC 109
L AYD S+ S LC
Sbjct: 75 LLIAYDIST-YSHLC 88
>AF025457-10|AAB70972.1| 148|Caenorhabditis elegans Hypothetical
protein C08E3.11 protein.
Length = 148
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 783 EWTRECYAPVCPCAVYW 733
EW +ECY P+ C V W
Sbjct: 81 EWKKECYEPLLGCCVCW 97
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 793 AARRMDTRMLCARMPLRGLLVHQYQQVPI 707
AA+ +D R +PL+GLL HQ + +P+
Sbjct: 166 AAKLVDRRTSIFGVPLKGLLEHQNRHIPL 194
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 793 AARRMDTRMLCARMPLRGLLVHQYQQVPI 707
AA+ +D R +PL+GLL HQ + +P+
Sbjct: 395 AAKLVDRRTSIFGVPLKGLLEHQNRHIPL 423
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 793 AARRMDTRMLCARMPLRGLLVHQYQQVPI 707
AA+ +D R +PL+GLL HQ + +P+
Sbjct: 166 AAKLVDRRTSIFGVPLKGLLEHQNRHIPL 194
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 793 AARRMDTRMLCARMPLRGLLVHQYQQVPI 707
AA+ +D R +PL+GLL HQ + +P+
Sbjct: 395 AAKLVDRRTSIFGVPLKGLLEHQNRHIPL 423
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 270 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 166
++ LHS+D P K +CD KY+ + ANH
Sbjct: 180 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 216
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 270 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 166
++ LHS+D P K +CD KY+ + ANH
Sbjct: 137 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 173
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -3
Query: 270 FMAENLHSEDFPIKFCC*SPICDFKYEMKS--TTANH 166
++ LHS+D P K +CD KY+ + ANH
Sbjct: 224 YLHSGLHSDDIPFKCSLCGSLCDGKYDFAAHLVYANH 260
>U40938-2|AAQ65206.1| 463|Caenorhabditis elegans Hypothetical
protein D1009.3b protein.
Length = 463
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 381
+LR E E C+ C+ +AN W + V +G + + +++T
Sbjct: 307 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 349
>U40938-1|AAA81695.2| 465|Caenorhabditis elegans Hypothetical
protein D1009.3a protein.
Length = 465
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 256 VLRHEEFSEGCEAACNGPYANRW-SKTMVGYGPEDTHFVVELT 381
+LR E E C+ C+ +AN W + V +G + + +++T
Sbjct: 309 ILRIEIQGETCDLTCSKRFANTWVGEWKVNFGKKQDGYKIQIT 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,475,595
Number of Sequences: 27780
Number of extensions: 393674
Number of successful extensions: 997
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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