Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O12
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 221 7e-58
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 160 1e-39
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 121 6e-28
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 101 6e-22
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 64 2e-10
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.009
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.009
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.1
Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical p... 28 9.5
AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical... 28 9.5
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 221 bits (539), Expect = 7e-58
Identities = 108/212 (50%), Positives = 137/212 (64%)
Frame = +2
Query: 104 STKVSLNEVVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 283
S +S I A TP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 284 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 463
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 464 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQXE 643
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K++ IT +DQ E
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRKDQDE 195
Query: 644 YAVNSHKTSAAAYEAKAXVDELVPVPVPQKRG 739
YA+NS+K SA A+E E+VPV V K+G
Sbjct: 196 YAINSYKKSAKAWENGNIGPEVVPVNVKSKKG 227
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +3
Query: 732 KEGLPVIFAEDEEYKRVNFEKFTKLSTVFQKE 827
K+G+ ++ +DEE+ +VNF+KFT L TVFQK+
Sbjct: 225 KKGVTIV-DKDEEFTKVNFDKFTSLRTVFQKD 255
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 160 bits (388), Expect = 1e-39
Identities = 87/208 (41%), Positives = 119/208 (57%)
Frame = +2
Query: 113 VSLNEVVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 292
+S +V I S TP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 293 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 472
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 473 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITXQDQXEYAV 652
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K IT ++Q YA+
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDYGITREEQDAYAI 180
Query: 653 NSHKTSAAAYEAKAXVDELVPVPVPQKR 736
S+K ++ A+ ++ +E+VPV V R
Sbjct: 181 ESYKKASNAWSSEKFSEEVVPVSVKTSR 208
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 121 bits (292), Expect = 6e-28
Identities = 74/175 (42%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Frame = +2
Query: 56 LDFNVLLQIFTAMAAFSTKVSLNEVVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIE 235
LD + + + T AA S K + I A TP+ + AA+E
Sbjct: 82 LDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALE 137
Query: 236 RAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 409
R + I+E V++G VC AN GQA ARQA + AGL S TTVNK +SGMK+I+L
Sbjct: 138 RGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTVNKGWSSGMKAIIL 197
Query: 410 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNK 574
AAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V DG++D ++K
Sbjct: 198 AAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQDGISDFFDK 251
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 101 bits (242), Expect = 6e-22
Identities = 56/175 (32%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Frame = +2
Query: 224 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 400
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 401 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 574
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 575 FHMGNCAENTAKKLQITXQDQXEYAVNSHKTSAAAYEAKAXVDELVPVPVPQKRG 739
MG AE + ++T Q+ E+A+ S A EA +E+V + + ++G
Sbjct: 158 LAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKG 212
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 63.7 bits (148), Expect = 2e-10
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 19/236 (8%)
Frame = +2
Query: 86 TAMAAFST-KVSLNEVVIASAVXTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 262
TA AA + K ++ +V+ AV TP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 263 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 442
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 443 IILAGGMESMSNVPF-YLKRGETSYGGM--------------QLVDGIV---FDGLTDVY 568
I+AGG+E +S+VP Y + + GM Q+V ++ + +
Sbjct: 131 AIIAGGVELLSDVPIRYNRNARKAMLGMNKAKDVPSKLKIGGQIVKNLLSPELPAVAEFS 190
Query: 569 NKFHMGNCAENTAKKLQITXQDQXEYAVNSHKTSAAAYEAKAXVDELVPVPVPQKR 736
MG+ + A ++ ++Q E+A+ SH T A+ ++VPV + K+
Sbjct: 191 TGETMGHSGDRLAAAFNVSRREQDEFAIRSH-TLASEAAKNGKFTDVVPVFLDGKK 245
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 218 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 397
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 398 SIMLAAQGLQTGAQDIILAGGMESMS 475
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +2
Query: 218 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 397
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 398 SIMLAAQGLQTGAQDIILAGGMESMS 475
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 286 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 441
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 442 YN 447
YN
Sbjct: 242 YN 243
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 322 SCNICRFAKKYHMYNCKQSMCLWHEI 399
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>Z99102-1|CAB11776.1| 523|Caenorhabditis elegans Hypothetical
protein B0331.2 protein.
Length = 523
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 405 IIDFMPEAHTLFTVVHMVLFGKPANITACLAGA 307
I F E T FTV+ V FG P + T C GA
Sbjct: 443 ISGFCIEVGTAFTVLICVKFGIPISSTHCTVGA 475
>Z81545-10|CAB04448.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 630 CXVICNFFAVFS 595
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
>AL031627-25|CAA20971.1| 170|Caenorhabditis elegans Hypothetical
protein F49H6.13 protein.
Length = 170
Score = 27.9 bits (59), Expect = 9.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 630 CXVICNFFAVFS 595
C ++CNFFAVFS
Sbjct: 15 CAIVCNFFAVFS 26
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,550,689
Number of Sequences: 27780
Number of extensions: 386711
Number of successful extensions: 1153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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