Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O09
         (510 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29117-16|CAE17732.1|  100|Caenorhabditis elegans Hypothetical p...    39   0.002
Z22176-15|CAE18056.1|  100|Caenorhabditis elegans Hypothetical p...    39   0.002
AF067220-2|AAC16978.1|  588|Caenorhabditis elegans Hypothetical ...    29   1.5  
U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical ...    28   3.4  
AF043701-5|ABP57822.1|  166|Caenorhabditis elegans Hypothetical ...    27   6.0  

>Z29117-16|CAE17732.1|  100|Caenorhabditis elegans Hypothetical
           protein ZK1098.11 protein.
          Length = 100

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 GEDAVISY-EKKGKGITLIHTNVPQAFQGKGVGKLLAQYAFDHALENRLNVICKCHFLAK 378
           G  A + Y E   + +   HT  P+  QGKGV K+L +    +A +N+  V   C ++AK
Sbjct: 21  GSKAYLEYAELPNRVLDFQHTVTPEDQQGKGVAKILVKEGLKYAADNKYLVQPTCWYVAK 80

Query: 379 FYE 387
           + +
Sbjct: 81  YLD 83


>Z22176-15|CAE18056.1|  100|Caenorhabditis elegans Hypothetical
           protein ZK1098.11 protein.
          Length = 100

 Score = 38.7 bits (86), Expect = 0.002
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 202 GEDAVISY-EKKGKGITLIHTNVPQAFQGKGVGKLLAQYAFDHALENRLNVICKCHFLAK 378
           G  A + Y E   + +   HT  P+  QGKGV K+L +    +A +N+  V   C ++AK
Sbjct: 21  GSKAYLEYAELPNRVLDFQHTVTPEDQQGKGVAKILVKEGLKYAADNKYLVQPTCWYVAK 80

Query: 379 FYE 387
           + +
Sbjct: 81  YLD 83


>AF067220-2|AAC16978.1|  588|Caenorhabditis elegans Hypothetical
           protein C33E10.5 protein.
          Length = 588

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 151 ELPWRKRELLLTFQT*ETIFKPTESEFFTNSSVL 50
           E+PWR  E LL   T E + K  E   FTN  ++
Sbjct: 183 EMPWRSFESLLYATTPELLVKLVECSSFTNDQLI 216


>U00033-1|AAC48292.3|  731|Caenorhabditis elegans Hypothetical
           protein F37C12.7 protein.
          Length = 731

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 19/64 (29%), Positives = 31/64 (48%)
 Frame = +1

Query: 106 MSGMLTRARAFSTEALKVVNNVAKQQFAVSIKGEDAVISYEKKGKGITLIHTNVPQAFQG 285
           +SG+LTR +    E+  V +++A   +     G+          KG+ L+H NV  A  G
Sbjct: 269 LSGLLTRNQEQVKESTAVKSDIALIMYTSGTTGQP---------KGVILLHQNVVAALLG 319

Query: 286 KGVG 297
           +G G
Sbjct: 320 QGDG 323


>AL023816-1|CAA19430.2|  250|Caenorhabditis elegans Hypothetical
           protein T05G11.2 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 506 YHSIFPVNNNXYYIYAKPNPWLNYSNSSFTFSTLYLLMLSS*NLAKK 366
           Y    PVN N   IY++    + Y+ SSF   T  L+M  S NL  K
Sbjct: 32  YFKRIPVNPNMILIYSRFGIDVIYTYSSFMVVTYILIMTLSTNLRIK 78


>AF043701-5|ABP57822.1|  166|Caenorhabditis elegans Hypothetical
           protein K12C11.7 protein.
          Length = 166

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 300 FPNSFSLKSLRHICMDQGYPLAFFLIADHSIFSFY 196
           F  +F   SL  + M   YPL F L+A H+I  F+
Sbjct: 114 FLQNFVDYSLMLVAMTYNYPLFFSLLAGHAIGYFF 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,975,802
Number of Sequences: 27780
Number of extensions: 212070
Number of successful extensions: 436
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)