Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O07
         (826 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme...    36   1.2  
UniRef50_A0BYS8 Cluster: Chromosome undetermined scaffold_138, w...    36   1.6  
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ...    35   2.2  
UniRef50_Q98QA5 Cluster: Putative uncharacterized protein MYPU_4...    34   3.8  
UniRef50_Q22S74 Cluster: Putative uncharacterized protein; n=1; ...    34   5.0  
UniRef50_Q8ID46 Cluster: Putative uncharacterized protein MAL13P...    33   6.6  
UniRef50_Q9G8N5 Cluster: Ribosomal protein S4; n=1; Naegleria gr...    33   8.7  
UniRef50_Q7R0Q0 Cluster: GLP_79_38727_30874; n=1; Giardia lambli...    33   8.7  

>UniRef50_Q09F58 Cluster: Heme maturase; n=4; Alveolata|Rep: Heme
           maturase - Tetrahymena paravorax
          Length = 514

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = -2

Query: 810 FFMNTNFLRINSDLIYKSSNILFVLSISQLSFFF--IVMVKRFIFWLFSFDLLAFNARVN 637
           FF+N N + IN    YK   ++F+  I  + FFF        +IF L +   L+ N  + 
Sbjct: 5   FFLNFNLININLSNYYKLIYLIFLQFIFSIEFFFKYNYFDSYYIFILNNITNLSTNYLI- 63

Query: 636 *FVLIVIMVYRNY 598
             + I+I+ Y+NY
Sbjct: 64  -IIFILILNYKNY 75


>UniRef50_A0BYS8 Cluster: Chromosome undetermined scaffold_138, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_138, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 1306

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +1

Query: 403  YLCKETESLLYYFLTKISVIYEFKIFIL*TDRIHVHSSFA----VLKLIILKFLLGHFNA 570
            YLCK+ ++ LYY L K    ++ +I  +   +I +   F     +L++++L         
Sbjct: 1034 YLCKD-DANLYYLLGKSK--FQEQITFIQPKKISLQDYFQFDAYILQILVLSQYFNQLKM 1090

Query: 571  KGAISLFSMIISVHHNND*NKLINSRIESQKIKRKQPKNKSLHHYN 708
               ++ F++II + +  + N+   S ++ Q++ +  P    LH YN
Sbjct: 1091 MCFMNAFTIIIQLEYRINSNEFSLSTLKFQQLWKYSPSLFDLHQYN 1136


>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1834

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 22/55 (40%), Positives = 31/55 (56%)
 Frame = -2

Query: 801 NTNFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFIFWLFSFDLLAFNARVN 637
           N NF  I + L+YK  N+LF L+IS  SF  I     + F L+SF +L    ++N
Sbjct: 811 NNNFFHILNFLMYKKKNVLFYLTIS--SFLKI----NYEFVLYSFPILTEQNKIN 859


>UniRef50_Q98QA5 Cluster: Putative uncharacterized protein
           MYPU_4610; n=1; Mycoplasma pulmonis|Rep: Putative
           uncharacterized protein MYPU_4610 - Mycoplasma pulmonis
          Length = 423

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
 Frame = -2

Query: 819 KKYFFMNTNFLRINSDLIYKSSNI--LFVLSISQLSFFF-IVMVKRFIFWLFSFDLLAFN 649
           KKY  +NTNF      L +   N   +F++ I+ L F F +  +K+ I++  S  +  F+
Sbjct: 20  KKYSTLNTNFYLFFPILFFLFFNYSKIFLVIITILFFVFSLKKIKKLIYFSISLSICFFS 79

Query: 648 ARVN*FVL--IVIMVYRNYHAKQRYR 577
             +N   L    + V  NY   Q+Y+
Sbjct: 80  IGINRLYLNKTNLQVEANYAISQKYK 105


>UniRef50_Q22S74 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 499

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 17/72 (23%), Positives = 37/72 (51%)
 Frame = -2

Query: 813 YFFMNTNFLRINSDLIYKSSNILFVLSISQLSFFFIVMVKRFIFWLFSFDLLAFNARVN* 634
           +F+ N+  + +     Y  ++ILF + I    + F+V    + F  +SF  + + A  + 
Sbjct: 237 FFYKNSVLIELGPSFFYFQNSILFAIKI----YSFVVFNAFYAFKGYSFKAVEYTALGSS 292

Query: 633 FVLIVIMVYRNY 598
            + I+I +Y++Y
Sbjct: 293 ILSIIIFIYQSY 304


>UniRef50_Q8ID46 Cluster: Putative uncharacterized protein
            MAL13P1.333; n=3; Plasmodium|Rep: Putative
            uncharacterized protein MAL13P1.333 - Plasmodium
            falciparum (isolate 3D7)
          Length = 3482

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = +2

Query: 389  YKIFNIFVRRRKAYFIIF*LKFQS---FMNLKFLFYKLIEFMF 508
            Y IFNIF   +K Y   F   F +    +N KFL+ K+++  F
Sbjct: 2937 YNIFNIFCNNKKGYLFFFHNMFNNINLMINNKFLYNKMVDVFF 2979


>UniRef50_Q9G8N5 Cluster: Ribosomal protein S4; n=1; Naegleria
           gruberi|Rep: Ribosomal protein S4 - Naegleria gruberi
          Length = 482

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
 Frame = +2

Query: 677 NQKINRFTITIKKKLNCE-----MLKTKRIFELLYIRSELILRKFVFIKKYF 817
           N+K  RF I IKKKLN +     +++  R  + L+I+S+  L K  F+  +F
Sbjct: 127 NKKFKRFFILIKKKLNKKFFFFYLVQMFRKIKFLFIKSDAFLNKKTFLFDFF 178


>UniRef50_Q7R0Q0 Cluster: GLP_79_38727_30874; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_79_38727_30874 - Giardia lamblia
           ATCC 50803
          Length = 2617

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = +1

Query: 340 FLRMSGDTSSLTYHIPL*--NL*YLCKETESLLYYFLTKISVIYEF-KIFIL*TDRIHVH 510
           FL M G   SL  HI L   N  Y     + L++YFLT I +IY F   F+L  + I   
Sbjct: 89  FLVM-GFVLSLALHISLTKGNTNYQAARAKRLVFYFLTSIRLIYAFGSSFLLFYNAIQKR 147

Query: 511 SSFAVLKLIILKFLLGHFNAKGAISLF 591
            +     LI+    + +F     +SLF
Sbjct: 148 FTLFFCHLIVAILSIFYFTIFNYMSLF 174


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,945,231
Number of Sequences: 1657284
Number of extensions: 12910034
Number of successful extensions: 28988
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28955
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71324098314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)