Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_O04
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa ... 184 6e-47
U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical pr... 138 5e-33
U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical pr... 126 3e-29
Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical p... 86 4e-17
M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical pr... 62 7e-10
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 38 0.010
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 38 0.010
U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 29 4.4
U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical p... 29 4.4
AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical... 29 4.4
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 29 4.4
>U41105-4|AAA82397.2| 407|Caenorhabditis elegans 3-ketoacyl-coa
thiolase protein 1 protein.
Length = 407
Score = 184 bits (449), Expect = 6e-47
Identities = 89/176 (50%), Positives = 111/176 (63%)
Frame = +3
Query: 123 STKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGN 302
S +S I A RTP+ + AA+ER + I+EV++G
Sbjct: 16 SAALSNKHAFIVGAARTPIGSFRSSLSSVTAPELASVAIKAALERGAVKPSSIQEVFLGQ 75
Query: 303 VCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGM 482
VC AN GQAPARQA + AGL S TTVNKVC+SG+K+I+LAAQ +QTG QD + GGM
Sbjct: 76 VCQANAGQAPARQAALGAGLDLSVAVTTVNKVCSSGLKAIILAAQQIQTGHQDFAIGGGM 135
Query: 483 ESMSNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNYKLLDK 650
ESMS VPFY++RGE YGG Q++DGIV DGLTD Y+K HMGNC E T+K + K
Sbjct: 136 ESMSQVPFYVQRGEIPYGGFQVIDGIVKDGLTDAYDKVHMGNCGEKTSKEMGITRK 191
Score = 106 bits (254), Expect = 2e-23
Identities = 53/91 (58%), Positives = 69/91 (75%)
Frame = +2
Query: 617 KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKR 796
K SK++ ITR+DQDEYA+NSYK+SA A+E E+VPV V K+G ++ +DEE+ +
Sbjct: 181 KTSKEMGITRKDQDEYAINSYKKSAKAWENGNIGPEVVPVNVKSKKGVTIV-DKDEEFTK 239
Query: 797 VNFEKFTKLSTVXQKENGTVTAGNASTLNDG 889
VNF+KFT L TV QK+ GT+TA NASTLNDG
Sbjct: 240 VNFDKFTSLRTVFQKD-GTITAANASTLNDG 269
>U41105-5|AAA82398.1| 390|Caenorhabditis elegans Hypothetical
protein T02G5.7 protein.
Length = 390
Score = 138 bits (334), Expect = 5e-33
Identities = 75/168 (44%), Positives = 97/168 (57%)
Frame = +3
Query: 132 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 311
+S +V I S RTP+ AAIER+G+ E+I+EV G V
Sbjct: 1 MSDKKVFILSGARTPIGAYRGSFANFGAVELGTVAAKAAIERSGVAPEKIEEVIGGCVLP 60
Query: 312 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 491
A LGQ RQ + AGLP +T TVNKVC+S MK+++ AA ++ G D IL G E+M
Sbjct: 61 AGLGQNVTRQISLSAGLPVTTQAVTVNKVCSSSMKALVTAAVEIKAGYYDTILVVGTENM 120
Query: 492 SNVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKNY 635
S VPFY+ RGE +GG+Q+ DGI DGL D+ K MG CAE T K+Y
Sbjct: 121 SQVPFYVPRGEIPFGGIQMTDGISKDGLEDIKEKGPMGLCAEKTVKDY 168
Score = 78.6 bits (185), Expect = 6e-15
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Frame = +2
Query: 617 KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKR 796
K K ITR++QD YA+ SYK+++ A+ ++ F +E+VPV V R + V+ EDEEYK+
Sbjct: 163 KTVKDYGITREEQDAYAIESYKKASNAWSSEKFSEEVVPVSVKTSR-SEVVITEDEEYKK 221
Query: 797 VNFEKFTKLSTVXQKE-NGTVTAGNASTLNDG 889
+ K + L V ++ GT+T NAS+LNDG
Sbjct: 222 LIESKVSSLKPVFVRDGTGTITPANASSLNDG 253
>U41105-8|AAA82403.1| 460|Caenorhabditis elegans Hypothetical
protein T02G5.4 protein.
Length = 460
Score = 126 bits (303), Expect = 3e-29
Identities = 80/201 (39%), Positives = 108/201 (53%), Gaps = 2/201 (0%)
Frame = +3
Query: 36 EIVVTVSNRNIVLLDFNVLLQIFTAMAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXX 215
EI+ ++ LD + + + T AA S K + I A RTP+
Sbjct: 69 EIMSRYFKAKMLSLDGHAIGRGITTSAALSNK----DAFIVGAARTPIGSFRSSLSSVTA 124
Query: 216 XXXXXXXVNAAIERAGIPKEEIKE--VYIGNVCSANLGQAPARQAVIFAGLPKSTICTTV 389
+ AA+ER + I+E V++G VC AN GQA ARQA + AGL S TTV
Sbjct: 125 PELASVAIKAALERGAVKPSSIQEANVFLGQVCHANAGQASARQAALGAGLDLSVAVTTV 184
Query: 390 NKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVDGIVFD 569
NK +SGMK+I+LAAQ +QTG QD+ + GGMESMS VPF+L R E S Q V+ V D
Sbjct: 185 NKGWSSGMKAIILAAQQIQTGHQDLAIGGGMESMSQVPFFLARVEQSSNKYQ-VEQTVQD 243
Query: 570 GLTDVYNKFHMGNCAENTAKN 632
G++D ++K + E T N
Sbjct: 244 GISDFFDKQELCINGERTNGN 264
>Z81546-11|CAB04455.2| 394|Caenorhabditis elegans Hypothetical
protein F53A2.7 protein.
Length = 394
Score = 85.8 bits (203), Expect = 4e-17
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
Frame = +3
Query: 243 AAIERAGIPKEEIKEVYIGNV-CSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKS 419
AA++ A + + + V GNV S+ G +R + +G+P++ TVN++C SG ++
Sbjct: 38 AALKHANVGADAVDHVIFGNVVASSRDGIYLSRHIGLKSGVPQNVGALTVNRLCGSGFQA 97
Query: 420 IMLAAQGLQTGAQDIILAGGMESMSNVPFYLK--RGETSYGGMQLVDGIVFDGLTDVYNK 593
++ AAQ ++ G +I+LAGG E+MS VPF ++ R T+ G + +++D L+D Y K
Sbjct: 98 VVNAAQAIKLGESNIVLAGGTENMSMVPFAVRDIRFGTALGKKYEFEDMLWDSLSDPYAK 157
Query: 594 FHMGNCAENTAKNYKL 641
MG AE YK+
Sbjct: 158 LAMGQTAEKLGAQYKV 173
Score = 56.0 bits (129), Expect = 3e-08
Identities = 33/100 (33%), Positives = 54/100 (54%)
Frame = +2
Query: 590 QISHGKLC*KHSKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVI 769
+++ G+ K + ++TRQ+ DE+A+ S A EA + +E+V + + ++G
Sbjct: 157 KLAMGQTAEKLGAQYKVTRQEADEFALRSQTLWKKAQEAGVYKNEIVGITIKGRKGEE-S 215
Query: 770 FAEDEEYKRVNFEKFTKLSTVXQKENGTVTAGNASTLNDG 889
F DE + E KL V QK+ G V AGNAS ++DG
Sbjct: 216 FEIDEHPRATTAESLAKLKPVFQKD-GLVNAGNASGISDG 254
>M77697-2|AAA27897.2| 448|Caenorhabditis elegans Hypothetical
protein B0303.3 protein.
Length = 448
Score = 61.7 bits (143), Expect = 7e-10
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Frame = +3
Query: 105 TAMAAFST-KVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEI 281
TA AA + K ++ +V+ AVRTP + A +E+ +P E++
Sbjct: 11 TARAASAVAKKNMPNIVLVDAVRTPFVVSGTVFKDLMAVDLQKEAIKALVEKTKLPYEQL 70
Query: 282 KEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQD 461
+ G V AR+A + AG+P TV C S ++ L TG +
Sbjct: 71 DHIICGTVIQECKTSNIAREAALLAGVPDKIPAHTVTLACISSNVAMTTGMGMLATGNAN 130
Query: 462 IILAGGMESMSNVPFYLKR 518
I+AGG+E +S+VP R
Sbjct: 131 AIIAGGVELLSDVPIRYNR 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 31/84 (36%), Positives = 47/84 (55%)
Frame = +2
Query: 638 ITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFT 817
++R++QDE+A+ S+ ++ A + F D +VPV + K+ P ED + EK +
Sbjct: 208 VSRREQDEFAIRSHTLASEAAKNGKFTD-VVPVFLDGKK--PKTIKEDNGIRVSTLEKLS 264
Query: 818 KLSTVXQKENGTVTAGNASTLNDG 889
L K +GTVTA NAS L DG
Sbjct: 265 SLKPAFVKPHGTVTAANASYLTDG 288
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 237 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 416
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 417 SIMLAAQGLQTGAQDIILAGGMESMS 494
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 237 VNAAIERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMK 416
V A++ + +I++ +G + A V G+P VN CASG
Sbjct: 37 VTTALDDCKMKYSDIQQATVGYLFGGTCCGQRALYEVGLTGIP----IFNVNNACASGSS 92
Query: 417 SIMLAAQGLQTGAQDIILAGGMESMS 494
+ L Q +++G D++L G E M+
Sbjct: 93 GLFLGKQIIESGNSDVVLCAGFERMA 118
>U56965-9|AAB52662.2| 265|Caenorhabditis elegans Hypothetical
protein C15H9.2 protein.
Length = 265
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +2
Query: 305 LFCKFG-PSTCK-TSCNICRFAKKYHMYNCKQ--SMCLWH----EIYNVGSTRSTNWSPR 460
L C +G PS + T NI + H ++CK C ++ YN+ ST+ W+ R
Sbjct: 182 LNCIYGYPSVFRITRGNIVELLELSHFFDCKNVTMFCEYNLCNDTCYNIRSTQKMEWAIR 241
Query: 461 YN 466
YN
Sbjct: 242 YN 243
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 704 AKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVXQKENGTVT 859
A AFV + VP+ Q RG +FA+ ++ + F+K +S NG+V+
Sbjct: 169 AAAFVSGMTAVPI-QIRGR-TLFAQYSTHRELKFDKNKAISDTESVANGSVS 218
>U41534-11|AAM22028.1| 686|Caenorhabditis elegans Hypothetical
protein C16A3.1b protein.
Length = 686
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/63 (28%), Positives = 28/63 (44%)
Frame = +2
Query: 644 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKL 823
R++ A +R AA A A P P P K PV+F+++ + + TK
Sbjct: 15 REEAIRRAAAYREREMAAANATASTSSAAP-PAPPKPVIPVMFSQNRQPMKPTMNNSTKQ 73
Query: 824 STV 832
ST+
Sbjct: 74 STI 76
>AF000261-10|AAB52930.1| 639|Caenorhabditis elegans Hypothetical
protein F19B10.10 protein.
Length = 639
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 341 SCNICRFAKKYHMYNCKQSMCLWHEI 418
+C++ R A KY+ Y +QS LW I
Sbjct: 15 ACSLRRMANKYYPYTMRQSFPLWTSI 40
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 623 SKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKR-GAPVIFAEDEEYKRV 799
SKK ++T+++ D A +++E + + + P+PV P++ +E E R
Sbjct: 2030 SKKPELTQEEIDHIAWIQSIAEQSSFEQASTIPDRPPLPVRLPTVDEPIVSSEQHEEDRS 2089
Query: 800 NFEKFTKLSTVXQK 841
F + ST+ +
Sbjct: 2090 KQSSFEQASTIPDR 2103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,234,281
Number of Sequences: 27780
Number of extensions: 408853
Number of successful extensions: 1251
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -