Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_O01
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p pro...    29   5.4  
AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA...    29   5.4  
AE013599-2970|AAF57503.1|  158|Drosophila melanogaster CG13869-P...    29   7.2  

>AY084209-1|AAL89947.1|  866|Drosophila melanogaster SD08058p
           protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 39  NLRERRAVPTNINFSEIKHASAYRCNVKCERKIL*IKYEKSE 164
           N +  R+V + +NF  +K+  A    V C R+ + +KY+K E
Sbjct: 432 NEQRARSVDSLLNFETVKYYGAEHYEVDCYREAI-LKYQKEE 472


>AE014297-2098|AAF55241.1|  866|Drosophila melanogaster CG4225-PA
           protein.
          Length = 866

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 39  NLRERRAVPTNINFSEIKHASAYRCNVKCERKIL*IKYEKSE 164
           N +  R+V + +NF  +K+  A    V C R+ + +KY+K E
Sbjct: 432 NEQRARSVDSLLNFETVKYYGAEHYEVDCYREAI-LKYQKEE 472


>AE013599-2970|AAF57503.1|  158|Drosophila melanogaster CG13869-PA
           protein.
          Length = 158

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 172 EARSLFSYLIHRILRSHFTLQ-RYADA 95
           E   L++ L+HR+LR H TL  RY DA
Sbjct: 94  EHSGLYAQLLHRLLRPHQTLDVRYLDA 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,959,937
Number of Sequences: 53049
Number of extensions: 512470
Number of successful extensions: 923
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)