Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N22
         (421 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17N87 Cluster: Putative uncharacterized protein; n=1; ...    35   0.77 
UniRef50_Q1RPX6 Cluster: Zinc finger protein; n=1; Ciona intesti...    34   1.3  
UniRef50_Q16XH9 Cluster: Putative uncharacterized protein; n=1; ...    33   2.4  
UniRef50_Q54HQ3 Cluster: Putative uncharacterized protein; n=1; ...    32   4.1  
UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1; ...    32   5.4  
UniRef50_Q5AKA4 Cluster: Putative uncharacterized protein; n=2; ...    32   5.4  
UniRef50_Q4Y7M8 Cluster: Putative uncharacterized protein; n=2; ...    31   7.2  
UniRef50_Q7Q704 Cluster: ENSANGP00000017828; n=1; Anopheles gamb...    31   9.5  

>UniRef50_Q17N87 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 199

 Score = 34.7 bits (76), Expect = 0.77
 Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
 Frame = +1

Query: 97  IGVHQFPKDKKIGRLWLK-----AI*REKSSRLCRKHFVESDYENISKYTGVKH*HK--- 252
           + +H+FPKDK+  + W++      +    ++ LC +HF   D+EN+      K   K   
Sbjct: 23  VSLHRFPKDKETRKRWVQFCNEPDLTNPDAAVLCSRHFDRYDFENVYMEGARKILRKGVV 82

Query: 253 -YLKKPVSEETKSRE 294
             +++PVSE+  + E
Sbjct: 83  PTIREPVSEDQPNGE 97


>UniRef50_Q1RPX6 Cluster: Zinc finger protein; n=1; Ciona
           intestinalis|Rep: Zinc finger protein - Ciona
           intestinalis (Transparent sea squirt)
          Length = 1085

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 10/49 (20%)
 Frame = +1

Query: 103 VHQFPKDKKIGRLWLKAI----------*REKSSRLCRKHFVESDYENI 219
           +H+FP+DK+  +LWLK I           R K+  +C KHF   D+  +
Sbjct: 28  LHRFPQDKEFAKLWLKNINNPTLTVNSWNRVKTLYICSKHFTPKDFMKV 76


>UniRef50_Q16XH9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 636

 Score = 33.1 bits (72), Expect = 2.4
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
 Frame = +1

Query: 109 QFPKDKKIGRLWLKAI*R------EKSSRLCRKHFVESDYENISKYTGVK 240
           +FP D  I   W+ A+ R      +K+S +C  HF + D+E +SK   +K
Sbjct: 29  KFPDDPSIREQWVAAVARPDGWQPKKTSCICMNHFRKDDFEKLSKPAKLK 78


>UniRef50_Q54HQ3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 92

 Score = 32.3 bits (70), Expect = 4.1
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -3

Query: 293 SLLFVSSETGFFRYLC*CLTPVYLLMFS*SDSTKCLRHNLELFSRQMAFNHSLPIFLSF 117
           ++ F  + T FF +LC C    +LL FS S  +      L   S    F+HSL  F +F
Sbjct: 33  AVFFFFAITYFFEFLCSCKGSNWLLFFSKSLQSSSFTFFLHQPSSFFLFSHSLLCFFNF 91


>UniRef50_Q16ZG3 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 437

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +1

Query: 166 KSSRLCRKHFVESDYENISKYT-GVKH*HKYLKKPVSEETKSR 291
           KSSR+C  HF  SD+ N + ++ G+K        P S+E K+R
Sbjct: 64  KSSRICSDHFQPSDFNNPNLFSQGLKKGSVPTLYPASKEPKNR 106


>UniRef50_Q5AKA4 Cluster: Putative uncharacterized protein; n=2;
           Candida albicans|Rep: Putative uncharacterized protein -
           Candida albicans (Yeast)
          Length = 346

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +2

Query: 89  AQKLEYINSRRTRKLEDCG*RPFDAKKVRGYVVNTLWNLTMKTL--VNTQVSNININI*R 262
           + +L YIN+  T        +PFD+KK     + +++      +  +NT+  NI   I +
Sbjct: 46  SSRLNYINNNNTITKNTYSQKPFDSKKPFDIKIPSVFKYEANKIHKINTRNENIKQEINK 105

Query: 263 NQFLKKQKVEKL 298
            +   K+K EKL
Sbjct: 106 EEQELKEKYEKL 117


>UniRef50_Q4Y7M8 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 2337

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 193 FVESDYENISKYTGVKH-*HKYLKKPVSEETKSREVTYVI 309
           F +  YE++ KY   KH  + YLKK ++++TK+   TY+I
Sbjct: 447 FQKDSYEHMEKYQDAKHLVYHYLKKKIAKKTKNS--TYLI 484


>UniRef50_Q7Q704 Cluster: ENSANGP00000017828; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000017828 - Anopheles gambiae
           str. PEST
          Length = 162

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +1

Query: 94  EIGVHQFPKDKKIGRLWLKAI*REKS------SRLCRKHFVESDYE 213
           +IG H FP D    + W+K   RE S        +C  HF ++DY+
Sbjct: 24  DIGFHTFPSDPVQRQRWVKFCQREPSWQPKSCDSMCSVHFKDTDYQ 69


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,761,963
Number of Sequences: 1657284
Number of extensions: 6042802
Number of successful extensions: 14657
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14646
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)