Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N22
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.        29   4.8  
CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.        29   6.3  
BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,...    29   6.3  

>BC131722-1|AAI31723.1|  102|Homo sapiens THAP9 protein protein.
          Length = 102

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
 Frame = +1

Query: 97  IGVHQFPKDKKIGRLWLKAI*R--EKSSR---------LCRKHFVESDYEN 216
           +  HQFP D      W++A+ R   +S +         LC KHF ESD+E+
Sbjct: 23  LSFHQFPTDTIQRSKWIRAVNRVDPRSKKIWIPGPGAILCSKHFQESDFES 73


>CR533485-1|CAG38516.1|  228|Homo sapiens DKFZP564I0422 protein.
          Length = 228

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +1

Query: 97  IGVHQFPKDKKIGRLWLKAI*RE-----KSSRLCRKHFVESDYE 213
           I  H+FP D K  + W++ + R+     K + LC KHF  S ++
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD 63


>BC008358-1|AAH08358.1|  228|Homo sapiens THAP domain containing,
           apoptosis associated protein 2 protein.
          Length = 228

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = +1

Query: 97  IGVHQFPKDKKIGRLWLKAI*RE-----KSSRLCRKHFVESDYE 213
           I  H+FP D K  + W++ + R+     K + LC KHF  S ++
Sbjct: 20  ISFHRFPLDPKRRKEWVRLVRRKNFVPGKHTFLCSKHFEASCFD 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,078,326
Number of Sequences: 237096
Number of extensions: 864597
Number of successful extensions: 1268
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)