Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N22
         (421 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    26   0.20 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   0.61 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   0.61 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   3.2  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 25.8 bits (54), Expect = 0.20
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 323 NSFSKIT*VTSLLFVSSETGFFRY 252
           N++ +   VT  +FV+SE G+F Y
Sbjct: 59  NAYVRFKLVTDCIFVTSEPGYFLY 82


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 200 STKCLRHNLELFSRQMAFNHSLPIFLSFGN 111
           +T+ L  N+  FSR+   N SL   L+F N
Sbjct: 481 NTRMLNDNVFAFSRETEDNGSLYAILNFSN 510


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 200 STKCLRHNLELFSRQMAFNHSLPIFLSFGN 111
           +T+ L  N+  FSR+   N SL   L+F N
Sbjct: 481 NTRMLNDNVFAFSRETEDNGSLYAILNFSN 510


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 178 TSNFFRVKWPLTTV 137
           TSN+   +WP T+V
Sbjct: 773 TSNYSTTRWPATSV 786


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,690
Number of Sequences: 438
Number of extensions: 2148
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)