Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N18
         (855 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    29   0.047
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   3.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   3.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   4.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 29.1 bits (62), Expect = 0.047
 Identities = 26/105 (24%), Positives = 45/105 (42%)
 Frame = +1

Query: 493 VLRDVLQALQYLHKQLYIHRSVRASHVLIGANGVARLSGLRTAASMMVRGQRQRKLHLLP 672
           + R V   +++L K   +HR + A +VL+  N   ++S    +     R   Q  ++   
Sbjct: 597 IARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKVSDFGLS-----RDVYQDNVYC-- 649

Query: 673 PPDHDNANLMWLSPEVLEQNLKGYDERSDIYSFGVLCLRTGQRGG 807
                   + W++ E L    + Y   SD++SFGVL       GG
Sbjct: 650 KNGGGKLPVRWMALESLTH--QRYTTYSDVWSFGVLLWEIVTLGG 692


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 282 EIPFYCYLCVIRFVQ 238
           E P+ C LC++RF Q
Sbjct: 103 EKPYECKLCLLRFSQ 117


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 282 EIPFYCYLCVIRFVQ 238
           E P+ C LC++RF Q
Sbjct: 359 EKPYECKLCLLRFSQ 373


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 740 PLRFCSKTSGLSHMRLALSW 681
           PL +CS TS  S + + L+W
Sbjct: 145 PLTYCSWTSRRSKVMVYLAW 164


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 827 WGLRRTGPPRWPVRRQSTPNE 765
           W L  + PP + +  Q TP++
Sbjct: 324 WSLTSSPPPPYQISAQPTPSQ 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,369
Number of Sequences: 336
Number of extensions: 4476
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)