Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N18
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    43   4e-06
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    42   7e-06
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    42   7e-06
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    30   0.024
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   3.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   6.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 42.7 bits (96), Expect = 4e-06
 Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 2/150 (1%)
 Frame = +1

Query: 340  ELHHANILPYLASFVHGRELYVVSPLMSFGSCRDILDRYFPEGISELACAIVLRDVLQAL 519
            +  H N++           + +++  M  GS    L R        L    +LR +   +
Sbjct: 690  QFEHPNVIFLQGVVTKSNPVMIITEFMENGSLDTFL-RANDGKFQVLQLVGMLRGIASGM 748

Query: 520  QYLHKQLYIHRSVRASHVLIGANGVARLS--GLRTAASMMVRGQRQRKLHLLPPPDHDNA 693
            QYL +  Y+HR + A +VL+ A  V +++  GL         G    +   +P       
Sbjct: 749  QYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIP------- 801

Query: 694  NLMWLSPEVLEQNLKGYDERSDIYSFGVLC 783
             + W +PE +    + +   SD++S G++C
Sbjct: 802  -VRWTAPEAIA--FRKFTSASDVWSMGIVC 828


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 41.9 bits (94), Expect = 7e-06
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
 Frame = +1

Query: 466 GISELACAIVLRDVLQALQYLHKQLYIHRSVRASHVLIGANGVARLSGLRTAAS-MMVRG 642
           G+S L    +  DVL+ ++YLH Q  +HR V+  +VL+     A+L+      + +M+ G
Sbjct: 693 GLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLG 752

Query: 643 QRQRKLHLLPPPDHDNANLMWLSPEVLEQNLKGYDERSDIYSFGVL 780
                  ++  P H       ++PE+L  +   YD   D+Y+FG+L
Sbjct: 753 S------IVGTPVH-------MAPELLSGH---YDSSVDVYAFGIL 782


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 41.9 bits (94), Expect = 7e-06
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
 Frame = +1

Query: 466  GISELACAIVLRDVLQALQYLHKQLYIHRSVRASHVLIGANGVARLSGLRTAAS-MMVRG 642
            G+S L    +  DVL+ ++YLH Q  +HR V+  +VL+     A+L+      + +M+ G
Sbjct: 731  GLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLG 790

Query: 643  QRQRKLHLLPPPDHDNANLMWLSPEVLEQNLKGYDERSDIYSFGVL 780
                   ++  P H       ++PE+L  +   YD   D+Y+FG+L
Sbjct: 791  S------IVGTPVH-------MAPELLSGH---YDSSVDVYAFGIL 820


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 30.3 bits (65), Expect = 0.024
 Identities = 23/92 (25%), Positives = 45/92 (48%)
 Frame = +1

Query: 505 VLQALQYLHKQLYIHRSVRASHVLIGANGVARLSGLRTAASMMVRGQRQRKLHLLPPPDH 684
           V++A  YLH +  I+R ++  ++L+ + G  +L     A  +      ++       P++
Sbjct: 475 VVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL---DHGRKTWTFCGTPEY 531

Query: 685 DNANLMWLSPEVLEQNLKGYDERSDIYSFGVL 780
                  ++PEV+    KG+D  +D +S GVL
Sbjct: 532 -------VAPEVILN--KGHDISADYWSLGVL 554


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 529 HKQLYIHRSVRASHVLIGANGVARLSGLRTAASMMVRGQ 645
           H  LY H+        I A  V+R+S   +   +++RGQ
Sbjct: 12  HGGLYYHQRCSRDWFRISAGCVSRISNRISRNRVLLRGQ 50


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 520 QYLHKQLYIHRSVRASHVLI 579
           +YL+KQL +H   RA+  ++
Sbjct: 329 EYLYKQLELHTEDRAAESIL 348


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 654  PLSLAAHHHAGRGPEPRQSGHAVR 583
            P + +AH  +G    PRQ+G   R
Sbjct: 1766 PTNASAHSRSGSQSMPRQNGRYSR 1789


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,403
Number of Sequences: 438
Number of extensions: 5938
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)