Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N15
         (857 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    29   6.3  
04_04_1378 + 33105564-33105634,33105786-33106253,33106558-331065...    29   6.3  
03_05_0741 + 27287414-27287479,27287887-27287946,27288949-272891...    29   6.3  
10_06_0175 - 11490280-11491000,11491869-11491947,11493613-114938...    28   8.3  
01_06_0909 - 32903520-32903828,32903899-32903973,32904068-329042...    28   8.3  

>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 505 PPEPEQRWNPTLNWQPVPYNT-PPRDEDDLLYYYN 606
           PPE   R +PT +W P P  +   R  +DL  YYN
Sbjct: 480 PPEFCVRGSPTPDWPPPPTESDEERFREDLEQYYN 514


>04_04_1378 +
           33105564-33105634,33105786-33106253,33106558-33106583,
           33106741-33106771,33106890-33106977,33107094-33107338,
           33107339-33107383,33107530-33107621,33107718-33107920,
           33108215-33108496
          Length = 516

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +1

Query: 472 MTALTAMAGLYPPEPEQRWNPT--LNWQPVPYNTPP 573
           +T    MAG +PP+ +Q W     ++W   P+  PP
Sbjct: 438 LTIGAGMAGHWPPQQQQGWGNAGGMSWPHPPHPPPP 473


>03_05_0741 +
           27287414-27287479,27287887-27287946,27288949-27289112,
           27289158-27289241,27290115-27290178,27291181-27291334,
           27291605-27291675,27292138-27292242,27292734-27292826,
           27293672-27293746,27294114-27294199,27294293-27294499,
           27294585-27294684,27294765-27294835,27294960-27295041,
           27295920-27296078,27296480-27296533,27296775-27296817,
           27297630-27297712,27298569-27298631,27298720-27298794,
           27299620-27299745,27300267-27300499,27300611-27300655,
           27300953-27301019,27302095-27302166,27302276-27302520,
           27302598-27302655,27302743-27302910,27303224-27303298,
           27303412-27303669
          Length = 1101

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 205 QDTDLLLTFVVFRHGDRTPDQE 270
           Q  +L    VV RHGDRTP Q+
Sbjct: 397 QSEELRSVIVVIRHGDRTPKQK 418


>10_06_0175 -
           11490280-11491000,11491869-11491947,11493613-11493811,
           11494003-11494044
          Length = 346

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 496 GLYPPEPEQRWNPTLNWQPVPYNTPP 573
           G  PP+P   W+P LN   +PY  PP
Sbjct: 126 GDQPPQPSLGWSPNLN---LPYPLPP 148


>01_06_0909 -
           32903520-32903828,32903899-32903973,32904068-32904235,
           32904508-32904565,32904638-32904879,32905145-32905216,
           32905865-32905943,32906734-32907062,32907137-32907256,
           32907355-32907429,32908260-32908342,32908942-32908984,
           32909271-32909429,32910203-32910281,32910685-32910755,
           32910847-32910946,32911023-32911229,32911348-32911442,
           32912362-32912436,32912621-32912713,32913078-32913182,
           32913851-32913921,32914943-32915096,32916035-32916098,
           32916717-32916800,32917543-32917589,32918352-32918411,
           32918521-32918592
          Length = 1062

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 199 SLQDTDLLLTFVVFRHGDRTPDQE 270
           S Q  +L     V RHGDRTP Q+
Sbjct: 361 SRQSEELRCVIAVIRHGDRTPKQK 384


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,382,034
Number of Sequences: 37544
Number of extensions: 516366
Number of successful extensions: 1129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)