BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N15
(857 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 129 4e-32
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 129 4e-32
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 35 8e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 27 0.22
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 8.3
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 22 8.3
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 22 8.3
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 129 bits (311), Expect = 4e-32
Identities = 67/197 (34%), Positives = 100/197 (50%)
Frame = +1
Query: 232 VVFRHGDRTPDQEELALFPSSTQGNKDLFYPYGLKALTNMGKRRACSVGKYLRKNYDGFL 411
V+FRHGDR PD++ ++P D FYP LTN GK R +G++LR+ Y FL
Sbjct: 7 VIFRHGDRIPDEKN-EMYPKDPYLYYD-FYPLERGELTNSGKMREYQLGQFLRERYGDFL 64
Query: 412 SRLYLPDEIVIRTTDYDRTKMTALTAMAGLYPPEPEQRWNPTLNWQPVPYNTPPRDEDDL 591
+Y + + ++ YDRTKM+ +A LYPP Q+WN LNWQP+ R ED++
Sbjct: 65 GDIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNI 124
Query: 592 LYYYNCPRYIALRDETASLPEIQDLLAPYKDLFQYLEQHTKTNITTSEDVFYLDNLFQTL 771
+C + D P + + Y L + LE+ T NITT D +Y+ +
Sbjct: 125 FLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAE 184
Query: 772 XNVGVETPKWAQEVMPQ 822
+ G+ P W + P+
Sbjct: 185 QSYGLTLPSWTNNIFPR 201
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 129 bits (311), Expect = 4e-32
Identities = 67/197 (34%), Positives = 100/197 (50%)
Frame = +1
Query: 232 VVFRHGDRTPDQEELALFPSSTQGNKDLFYPYGLKALTNMGKRRACSVGKYLRKNYDGFL 411
V+FRHGDR PD++ ++P D FYP LTN GK R +G++LR+ Y FL
Sbjct: 22 VIFRHGDRIPDEKN-EMYPKDPYLYYD-FYPLERGELTNSGKMREYQLGQFLRERYGDFL 79
Query: 412 SRLYLPDEIVIRTTDYDRTKMTALTAMAGLYPPEPEQRWNPTLNWQPVPYNTPPRDEDDL 591
+Y + + ++ YDRTKM+ +A LYPP Q+WN LNWQP+ R ED++
Sbjct: 80 GDIYTEESVSALSSFYDRTKMSLQLVLAALYPPNKLQQWNEDLNWQPIATKYLRRYEDNI 139
Query: 592 LYYYNCPRYIALRDETASLPEIQDLLAPYKDLFQYLEQHTKTNITTSEDVFYLDNLFQTL 771
+C + D P + + Y L + LE+ T NITT D +Y+ +
Sbjct: 140 FLPEDCLLFTIELDRVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAE 199
Query: 772 XNVGVETPKWAQEVMPQ 822
+ G+ P W + P+
Sbjct: 200 QSYGLTLPSWTNNIFPR 216
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 35.1 bits (77), Expect = 8e-04
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 613 RYIALRDETASLPEIQDLLAPYKDLFQYLEQHTKTNITTSEDVFYLDNLFQTLXNVGVET 792
R+ D+ P + + Y L + LE+ T NITT D +Y+ + + G+
Sbjct: 35 RFTIELDKVLESPRGKYEFSKYDKLKKKLEEWTGKNITTPWDYYYIYHTLVAEQSYGLTL 94
Query: 793 PKWAQEVMPQ 822
P W + P+
Sbjct: 95 PSWTNNIFPK 104
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 27.1 bits (57), Expect = 0.22
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +2
Query: 533 PH*TGNPSHITLHRAMKMTYYITTTALVILH*EMKQLVCRKSKIYWRRTKTSFNI*NSTR 712
PH + NP +I L+ + + L L +M+++ YW T TSF + N
Sbjct: 306 PHNSTNPPNILLYYRDSLALSVFALILTALLRKMQEMSIEVP--YWISTTTSFVLNNRAG 363
Query: 713 KLILL 727
+ ++L
Sbjct: 364 RFLIL 368
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.8 bits (44), Expect = 8.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = -2
Query: 538 MWGSIVAPALVGTIRPSQLKLSF*CDHNP*CG*QSRLVGITSKGIHHS 395
++ +V+ L G + P+ + + H P G SR + K IH S
Sbjct: 96 VYAVVVSHPLTGDLSPAAVSYTSGFYHIPVIGISSRDSAFSDKNIHVS 143
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 487 AMAGLYPPEPEQRWNPTLN 543
A+ Y PE + WN TL+
Sbjct: 141 ALGKQYTPEVAEAWNKTLD 159
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.8 bits (44), Expect = 8.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +1
Query: 487 AMAGLYPPEPEQRWNPTLN 543
A+ Y PE + WN TL+
Sbjct: 141 ALGKQYTPEVAEAWNKTLD 159
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,464
Number of Sequences: 438
Number of extensions: 5995
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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