Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N09
(848 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34) 144 8e-35
SB_15238| Best HMM Match : PPTA (HMM E-Value=2.9e-38) 53 3e-07
SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_41971| Best HMM Match : CAT_RBD (HMM E-Value=2) 30 2.1
SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024) 30 2.1
SB_29447| Best HMM Match : VWA (HMM E-Value=0.36) 30 2.1
SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051) 30 2.1
SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19) 30 2.1
SB_49272| Best HMM Match : CAT_RBD (HMM E-Value=2) 30 2.1
SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_47214| Best HMM Match : CAT_RBD (HMM E-Value=1.5) 30 2.7
SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
>SB_51889| Best HMM Match : PPTA (HMM E-Value=6.3e-34)
Length = 428
Score = 144 bits (349), Expect = 8e-35
Identities = 68/155 (43%), Positives = 87/155 (56%)
Frame = +3
Query: 369 HGRVKVRTSXXXXXXXXXXXXXXXXIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 548
HGR+KVRTS +F QKI KR++ D+E L+LT +L NPD
Sbjct: 1 HGRIKVRTSEEQAAAKRKEREKKMKLFSDLDQKINKKREKREFDEEALDLTEQILGVNPD 60
Query: 549 IYTLWNIRREILQLFKKSNDNIEEMSQVYNAELHLTEYCLKINPKSYCAWHQREWVLLTR 728
+ TLWN RREI +++ E++ V EL + CLK+NPKSY W R+WV
Sbjct: 61 VSTLWNFRREIFLKWREDGGFTEKLVNVSRKELAFLQGCLKVNPKSYGVWFHRQWVNEFI 120
Query: 729 DDPDWQKELELCNTYLKLDERNFHTWDYRRFVVSQ 833
PDW +EL LCN +L DERNFH WDYRR V +
Sbjct: 121 PAPDWTQELLLCNMFLSFDERNFHCWDYRRIVTKK 155
>SB_15238| Best HMM Match : PPTA (HMM E-Value=2.9e-38)
Length = 183
Score = 52.8 bits (121), Expect = 3e-07
Identities = 37/110 (33%), Positives = 53/110 (48%)
Frame = +3
Query: 501 KELLELTGNVLSSNPDIYTLWNIRREILQLFKKSNDNIEEMSQVYNAELHLTEYCLKINP 680
+E LE V+ P Y +W RR ++ D + + SQ EL T+ L+ +
Sbjct: 73 QEELEYVSRVIEDQPKNYQVWYHRRMLV-------DWLGDGSQ----ELEFTQSILRPDA 121
Query: 681 KSYCAWHQREWVLLTRDDPDWQKELELCNTYLKLDERNFHTWDYRRFVVS 830
K+Y AW R+WV+ R W ELE + L D RN W+ R FV+S
Sbjct: 122 KNYHAWQHRQWVI--RAFNLWDNELEYVDKLLAEDLRNNSAWNQRYFVLS 169
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 612 IEEMSQVYNAELHLTEYCLKINPKSYCAWHQREWVLLTRDDPDWQKELELCNTYLKLDER 791
+ +S+ EL ++ PK+Y W+ R +L D +ELE + L+ D +
Sbjct: 65 LRALSKDLQEELEYVSRVIEDQPKNYQVWYHRR--MLVDWLGDGSQELEFTQSILRPDAK 122
Query: 792 NFHTWDYRRFVV 827
N+H W +R++V+
Sbjct: 123 NYHAWQHRQWVI 134
>SB_45447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 708 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 746
>SB_41971| Best HMM Match : CAT_RBD (HMM E-Value=2)
Length = 295
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 251 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 289
>SB_31815| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0024)
Length = 1163
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 156 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 194
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 953 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 991
>SB_29447| Best HMM Match : VWA (HMM E-Value=0.36)
Length = 329
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 232
>SB_9903| Best HMM Match : Lipase_GDSL (HMM E-Value=0.0051)
Length = 891
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 781 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 819
>SB_9411| Best HMM Match : Exo_endo_phos (HMM E-Value=0.19)
Length = 891
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 750 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 788
>SB_49272| Best HMM Match : CAT_RBD (HMM E-Value=2)
Length = 318
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 232
>SB_46747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 135 KECKNEKENLRSLGKLLSKQPDQRKLGAVLKEKKKSFKK 173
>SB_32319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 5 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKKKSFKK 43
>SB_47214| Best HMM Match : CAT_RBD (HMM E-Value=1.5)
Length = 238
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 483 KECTLDKELLELTGNVLSSNPDIYTLWNIRREILQLFKK 599
KEC +KE L G +LS PD L + +E + FKK
Sbjct: 194 KECKNEKENLRSLGKLLSKQPDQRELGAVLKEKEKSFKK 232
>SB_54765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 513 ELTGNVLSSNPDIYTLWNIRREILQLFKKSNDNIEEMSQVYNAELHLTE 659
E T +V S+N + Y+ ++ +LFKKS + + +++V A+ + E
Sbjct: 267 EKTLDVSSNNSEKYSSMKSMKQARELFKKSKNQAKGLTEVKGAQPEIAE 315
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,674,837
Number of Sequences: 59808
Number of extensions: 439117
Number of successful extensions: 867
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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