Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N07
         (821 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138...    29   3.4  
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879...    29   3.4  
04_04_0004 - 22089250-22089582,22090050-22090325,22090626-220912...    29   4.5  
03_02_0331 - 7527010-7529352                                           29   4.5  
07_03_0517 + 19000050-19000427,19000539-19000766,19001142-190012...    29   5.9  

>11_01_0172 -
           1383568-1384440,1385336-1385401,1385470-1385505,
           1385604-1385743,1386978-1387134,1387245-1387418,
           1387540-1387790,1390296-1390446
          Length = 615

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
 Frame = -2

Query: 697 LISEPPHNNLILLSLTYSMTISHGYWSIAVAVPPTILFPTLASR-PQQESAGLGSNAETV 521
           L+    HN+++ LS++Y+M+++   W++ VA         L  R     + G GS++  +
Sbjct: 297 LLRNQLHNHMLDLSISYAMSVTQLQWNVKVARAKAEHAMQLKQRLGSALNNGAGSSSSPL 356

Query: 520 ALQLP 506
            + LP
Sbjct: 357 MVTLP 361


>03_05_0223 -
           22087076-22087340,22087448-22087726,22087808-22087950,
           22088029-22088133,22088272-22088465,22088561-22088753,
           22088893-22089202,22089335-22089558,22089862-22089990,
           22090019-22090078,22090426-22090617,22091463-22091522,
           22091606-22091688,22092473-22092611,22092949-22093083,
           22093187-22093462
          Length = 928

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 187 ISTNASHCWPSLESLIVLNRIWKL 258
           I  +   CWPSL++L++L R+W L
Sbjct: 597 IKVSGKSCWPSLKTLLLL-RLWSL 619


>04_04_0004 -
           22089250-22089582,22090050-22090325,22090626-22091282,
           22091367-22091603
          Length = 500

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 479 RWATAYTVLICTFTPGVLYV 420
           RWA  Y +   T TPGVLYV
Sbjct: 130 RWAADYLLRAATATPGVLYV 149


>03_02_0331 - 7527010-7529352
          Length = 780

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -1

Query: 530 RNSRPAAARWRGGCD 486
           RN  P  +RWRGGCD
Sbjct: 158 RNLPPVPSRWRGGCD 172


>07_03_0517 +
           19000050-19000427,19000539-19000766,19001142-19001221,
           19001222-19001441,19001571-19001713,19002023-19002160,
           19002295-19002376
          Length = 422

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 163 LEAVHADCPFAMYK*AAAIVVNNKRRHFI 77
           L A+  D P  +   AAAIVVN +RR+ +
Sbjct: 231 LNAIQTDAPHLLRYLAAAIVVNRRRRNML 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,825,102
Number of Sequences: 37544
Number of extensions: 578460
Number of successful extensions: 1419
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)