Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N07
         (821 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    41   0.001
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    41   0.001
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    37   0.015
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    36   0.035
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    33   0.19 
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    31   0.75 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U97008-11|AAK72054.1|  224|Caenorhabditis elegans Hypothetical p...    28   9.3  

>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +3

Query: 561 CGLDANVGNKIVGGTATAIDQYPWLIVIE-YVS----DNRIKLLCGGSLISGRYVLTAGH 725
           CG   NV +KI  G    ID+ PW + I  Y +    D      C G+L S R++LTA H
Sbjct: 33  CG--KNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATH 90

Query: 726 CIA 734
           C A
Sbjct: 91  CAA 93


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +3

Query: 585 NKIVGGTATAIDQYPWLI-VIEYVSDNRIKLLCGGSLISGRYVLTAGHCIA 734
           ++++GG+ ++   +PW + ++  +  +R    CGGSLI   +VLTA HC A
Sbjct: 56  HRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFA 102


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 588 KIVGGTATAIDQYPWLIVIE-YVSDNRIKLLCGGSLISGRYVLTAGHCIAG 737
           K+  G   +  + PW +    Y  D +    C G+++S R++L A HC AG
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 35.9 bits (79), Expect = 0.035
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 597 GGTATAIDQYPWLIVIEYVS-DNRIKLLCGGSLISGRYVLTAGHC 728
           G T       PW + I   +     +++CGG+LI+ ++VLTA HC
Sbjct: 34  GNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = +3

Query: 588 KIVGGTATAIDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHC 728
           +I+GG +   D   W+  +    DN   +LCG ++I   +++TA HC
Sbjct: 37  RIIGGNSID-DGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC 82


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +3

Query: 588 KIVGGTATAIDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHC 728
           ++VGG  T    +PW   +   +       CG S++   +++TA HC
Sbjct: 26  RVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC 70


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 615 IDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHCIAGAVLQIGKPTNI 770
           I  +PW +       NR+    GGS+IS  +++TA H   G +  IG   N+
Sbjct: 25  IKNFPWAVSFTVDGVNRL----GGSIISPYHIITAAH---GFITTIGSRGNL 69


>Z82071-1|CAB04917.1|  209|Caenorhabditis elegans Hypothetical
           protein W05B5.1 protein.
          Length = 209

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 327 PDGKPGKCINIYSCE-HLTQMLRPP-TSKENMLYVQNSRCK 443
           P  +PG   N  + + H TQ   PP T+ E+ LY+QN   K
Sbjct: 115 PPSRPGSAQNTPTKQQHFTQAATPPPTNHESPLYLQNGLSK 155


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +3

Query: 591 IVGGTATAIDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHCI 731
           I G +A + D      VI    D    + CGG LI+   V+T+ HC+
Sbjct: 18  INGFSANSFDTLSLASVITRFPDGTTNV-CGGVLIAPSIVITSAHCV 63


>Z19158-1|CAA79574.1|  788|Caenorhabditis elegans Hypothetical
           protein T23G5.1 protein.
          Length = 788

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +2

Query: 359 ILLRTPHSNVEASDLEGKHVIRT----KLQV*KCRSIQCMLWPSAFSHTPPSSGQLQGDC 526
           +L+R P ++ EA DL  K +  T     L+   C   +     S +  +P S GQLQ D 
Sbjct: 519 MLMRYPFTSAEARDLN-KRIFETIYYAALEA-SCELAELNGPYSTYEGSPVSKGQLQFDM 576

Query: 527 FGIT 538
           +G+T
Sbjct: 577 WGVT 580


>U97008-11|AAK72054.1|  224|Caenorhabditis elegans Hypothetical
           protein C03G6.5 protein.
          Length = 224

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +3

Query: 93  LLFTTIAAAYLYIANGQSACTASSGGQG-TCVDIYKCEPLLALVRKPD 233
           L F  I    L +ANG S  TAS+ G   T  D Y    L+ LVR  D
Sbjct: 34  LKFALIGTVLLGVANGASVATASAKGSNCTVQDGYAA--LMCLVRLSD 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,409,212
Number of Sequences: 27780
Number of extensions: 472496
Number of successful extensions: 1186
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)