Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N07
         (821 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    48   1e-07
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    24   2.0  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   3.4  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   3.4  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 48.0 bits (109), Expect = 1e-07
 Identities = 22/49 (44%), Positives = 34/49 (69%)
 Frame = +3

Query: 585 NKIVGGTATAIDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHCI 731
           ++IVGGT T I+++P +  I+   +    ++CG ++IS RYVLTA HCI
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTYEPG--MICGATIISKRYVLTAAHCI 205



 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 75  KIKCLRLLFTTIAAAYLYIANGQSACTASSGG 170
           +++C +     +  A    A G+ AC   SGG
Sbjct: 320 QVECYKYYGNIMVNAMCAYAKGKDACQMDSGG 351


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 23/77 (29%), Positives = 35/77 (45%)
 Frame = +3

Query: 591 IVGGTATAIDQYPWLIVIEYVSDNRIKLLCGGSLISGRYVLTAGHCIAGAVLQIGKPTNI 770
           IV     AID++  L V++    N I+L+C   L++  + L     +     QI  P NI
Sbjct: 125 IVSAYKIAIDKFDRLWVLDSGLINNIQLMCSPKLLA--FDLNTSKLLK----QIEIPHNI 178

Query: 771 XLGEYDTANSGPDCVVV 821
            +    T   GP  +VV
Sbjct: 179 AVNA-STGMGGPVSLVV 194


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 HPPLQRAAAGRLFRHYYPTQRTL 558
           +PPL   A   LFRH+   Q  L
Sbjct: 139 YPPLVSGALHLLFRHFSQRQEVL 161


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 490 HPPLQRAAAGRLFRHYYPTQRTL 558
           +PPL   A   LFRH+   Q  L
Sbjct: 107 YPPLVSGALHLLFRHFSQRQEVL 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,886
Number of Sequences: 438
Number of extensions: 5654
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)