Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N06
(592 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VJD0 Cluster: CG5131-PA; n=7; Endopterygota|Rep: CG51... 107 1e-22
UniRef50_Q9Y6H3 Cluster: XRCC6-binding protein 1; n=24; Eukaryot... 50 4e-05
UniRef50_UPI0000584C5E Cluster: PREDICTED: similar to Kub3-prov ... 46 9e-04
UniRef50_Q55CA5 Cluster: Putative uncharacterized protein; n=1; ... 36 0.54
UniRef50_Q6C253 Cluster: Yarrowia lipolytica chromosome F of str... 36 0.71
UniRef50_Q1MTR0 Cluster: Mitochondrial inner membrane peptidase ... 35 1.2
UniRef50_Q4P5B3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q9SRP6 Cluster: T21P5.16 protein; n=4; Magnoliophyta|Re... 34 2.9
UniRef50_Q5KGJ3 Cluster: Putative uncharacterized protein; n=2; ... 33 3.8
UniRef50_P53722 Cluster: Metalloprotease ATP23; n=9; Saccharomyc... 33 3.8
UniRef50_Q01JV5 Cluster: H0525D09.10 protein; n=4; Oryza sativa|... 33 5.0
UniRef50_O29723 Cluster: Translation initiation factor 2 subunit... 33 5.0
UniRef50_Q4QGV4 Cluster: TatD related deoxyribonuclease, putativ... 33 6.6
UniRef50_A2QKG2 Cluster: Similarity: the A. niger protein also s... 33 6.6
UniRef50_A4S8T1 Cluster: Predicted protein; n=1; Ostreococcus lu... 32 8.7
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 32 8.7
>UniRef50_Q9VJD0 Cluster: CG5131-PA; n=7; Endopterygota|Rep:
CG5131-PA - Drosophila melanogaster (Fruit fly)
Length = 283
Score = 107 bits (258), Expect = 1e-22
Identities = 50/76 (65%), Positives = 60/76 (78%)
Frame = +2
Query: 116 DASWTKIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGRRIRRNS 295
DAS +K+AH++CVK+KAL SVLAVR I K +AV +E+VFPKCY DLEPIGRRIRRNS
Sbjct: 206 DASPFNVKEAHQNCVKSKALASVLAVRNISKADAVAAVERVFPKCYADLEPIGRRIRRNS 265
Query: 296 DDMFRAFREAKYYGYD 343
D +A+ EA YGYD
Sbjct: 266 TDQQKAYMEAPMYGYD 281
Score = 59.3 bits (137), Expect = 7e-08
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +1
Query: 16 NELDFKNMEHLACTEIRAANLTHCSFASAWSQG 114
N++DF+N++HLACTEIRAANL HCSF SA QG
Sbjct: 173 NDMDFRNVDHLACTEIRAANLAHCSFLSAMFQG 205
>UniRef50_Q9Y6H3 Cluster: XRCC6-binding protein 1; n=24;
Eukaryota|Rep: XRCC6-binding protein 1 - Homo sapiens
(Human)
Length = 288
Score = 50.0 bits (114), Expect = 4e-05
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 134 IKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGR 277
+K+ H+ CV+ +A S+LAVR I K A +++VF C+ D EP GR
Sbjct: 216 LKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFGR 263
Score = 33.1 bits (72), Expect = 5.0
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 28 FKNMEHLACTEIRAANLT-HCSFAS 99
F N+ HLAC+E+RAANL+ CS +
Sbjct: 183 FTNIRHLACSEVRAANLSGDCSLVN 207
>UniRef50_UPI0000584C5E Cluster: PREDICTED: similar to Kub3-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Kub3-prov protein -
Strongylocentrotus purpuratus
Length = 198
Score = 45.6 bits (103), Expect = 9e-04
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 122 SWT-KIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGRRIRRNSD 298
SW + K H+ CV+ +A+ S+LAVR + + EA ++ V+ C++D P RR +D
Sbjct: 119 SWNFRFKNHHQTCVRRRAIGSILAVRNVSREEAEKAVDGVWETCFKDYAPFTTIPRRLAD 178
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/30 (46%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = +1
Query: 13 RNELDFKNMEHLACTEIRAANLT-HCSFAS 99
R ++D+ ++ H+AC+EIRA++L+ CSF S
Sbjct: 85 RAKVDWTDIRHVACSEIRASSLSGDCSFLS 114
>UniRef50_Q55CA5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 242
Score = 36.3 bits (80), Expect = 0.54
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +1
Query: 13 RNELDFKNMEHLACTEIRAANLT 81
+N+L+ N EHLACTEIRAANL+
Sbjct: 154 KNKLNPFNCEHLACTEIRAANLS 176
>UniRef50_Q6C253 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=2;
Saccharomycetales|Rep: Yarrowia lipolytica chromosome F
of strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 250
Score = 35.9 bits (79), Expect = 0.71
Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 131 KIKKAHEDCVKTKALYSVLAVRQI-DKLEAVDIIEKVFPKCYQDLEP 268
++ + H++C K +A+ SV+A D+ +A ++ +V+ C+ D P
Sbjct: 198 RLTRGHQECAKRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRP 244
>UniRef50_Q1MTR0 Cluster: Mitochondrial inner membrane peptidase
Atp23; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
inner membrane peptidase Atp23 - Schizosaccharomyces
pombe (Fission yeast)
Length = 185
Score = 35.1 bits (77), Expect = 1.2
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 137 KKAHEDCVKTKALYSVLAVRQI-DKLEAVDIIEKVFPKCYQDLEP 268
+K H++CVK +A SV K +A I+E+VF C+ D P
Sbjct: 136 RKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRP 180
>UniRef50_Q4P5B3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 217
Score = 34.7 bits (76), Expect = 1.6
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 22 LDFKNMEHLACTEIRAANLT-HCSFASAWSQ 111
+D+ N+ H AC+EIRAA+L+ C F W +
Sbjct: 131 VDWSNLRHHACSEIRAASLSGDCGFVREWQR 161
>UniRef50_Q9SRP6 Cluster: T21P5.16 protein; n=4; Magnoliophyta|Rep:
T21P5.16 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 194
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 131 KIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGR 277
K++ ++C+K + L S+ ++ A D +E V+ CY D +P R
Sbjct: 144 KLRGHEQECIKRRVLKSLRGNPYCSEVAAKDAMEAVWDTCYNDTKPFDR 192
>UniRef50_Q5KGJ3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 227
Score = 33.5 bits (73), Expect = 3.8
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 13 RNELDFKNMEHLACTEIRAANLT-HCSFASAWSQG 114
R ++D+ N+ H AC+EIRAANL+ C F +G
Sbjct: 139 RFKVDWGNLRHHACSEIRAANLSGDCRFTREVKRG 173
>UniRef50_P53722 Cluster: Metalloprotease ATP23; n=9;
Saccharomycetales|Rep: Metalloprotease ATP23 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 227
Score = 33.5 bits (73), Expect = 3.8
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 134 IKKAHEDCVKTKALYSVLAVRQIDKLE-AVDIIEKVFPKCYQDLEP 268
+ + H+DCV+ +A+ SV E A I+++V+ C+ D P
Sbjct: 176 VARGHQDCVRRRAIISVSGNPNCQSKEHAAKIVDEVWDSCFADTRP 221
>UniRef50_Q01JV5 Cluster: H0525D09.10 protein; n=4; Oryza
sativa|Rep: H0525D09.10 protein - Oryza sativa (Rice)
Length = 205
Score = 33.1 bits (72), Expect = 5.0
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 131 KIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGR 277
K++ ++CVK +AL S+ A D +E V+ CY D P R
Sbjct: 155 KMRGHEQECVKRRALMSLRNNPHCSGTAAKDAVEAVWSICYNDTRPFDR 203
>UniRef50_O29723 Cluster: Translation initiation factor 2 subunit
alpha; n=1; Archaeoglobus fulgidus|Rep: Translation
initiation factor 2 subunit alpha - Archaeoglobus
fulgidus
Length = 267
Score = 33.1 bits (72), Expect = 5.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 251 YQDLEPIGRRIRRNSDDMFRAFREAKYYGYD 343
+++LE IG+++ + D ++ AF EA + GY+
Sbjct: 123 FKELEKIGKKLMKEYDSVYSAFEEAAFEGYE 153
>UniRef50_Q4QGV4 Cluster: TatD related deoxyribonuclease, putative;
n=5; Trypanosomatidae|Rep: TatD related
deoxyribonuclease, putative - Leishmania major
Length = 363
Score = 32.7 bits (71), Expect = 6.6
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +2
Query: 89 PLRVLGLRXDASWTKIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQD 259
PL L L DA W ++K H +KAL + A R + D I FP C +D
Sbjct: 257 PLDRLMLETDAPWCELKGTHA----SKALLTAAAKRASSQQSVSDTILATFPTCRKD 309
>UniRef50_A2QKG2 Cluster: Similarity: the A. niger protein also
shows similarity to human KUB3; n=7; Pezizomycotina|Rep:
Similarity: the A. niger protein also shows similarity
to human KUB3 - Aspergillus niger
Length = 237
Score = 32.7 bits (71), Expect = 6.6
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 131 KIKKAHEDCVKTKALYSVLAVRQI-DKLEAVDIIEKVFPKCYQDLEP 268
K + H++CV+ +A+ SV A D+ A ++ +V+ C++D P
Sbjct: 185 KFTQQHQECVRRRAILSVRARPGCKDEAHAEKVVNEVWDSCFRDTRP 231
>UniRef50_A4S8T1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 168
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 134 IKKAHEDCVKTKALYSV-LAVRQIDKLEAVDIIEKVFPKCYQDLEP 268
+KK H+ CV+ +A SV + A ++++VF +C++D P
Sbjct: 118 LKKHHQKCVRRRAELSVAMNPNCTSDAHAKQVVDEVFERCFKDTAP 163
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 101 LGLRXDASWTKIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPK 247
L R DA W K+KK ++D K K + + K + V++++ P+
Sbjct: 14 LAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPKFVELVQNSIPE 62
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 465,608,295
Number of Sequences: 1657284
Number of extensions: 7849583
Number of successful extensions: 17599
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17594
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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