Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N06
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    22   3.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.5  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.5  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.8  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 445 HPDMFIKLIKKYAL 486
           HPD++  L+KKY++
Sbjct: 86  HPDVWNALVKKYSV 99


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = +2

Query: 155 CVKT--KALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGRRIR 286
           C KT  + +YS++++  +      DII    P  Y   E I +++R
Sbjct: 22  CYKTIKQHIYSLISLSYLPGPPVNDIISGNIPPLYTSAENIFKQLR 67


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 101 LGLRXDASWTKIKKAHED 154
           LGL   ASW K KK  ++
Sbjct: 412 LGLHFHASWLKSKKEFKE 429



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 58  EIRAANLTHCSFASAWSQG 114
           EI   +LTH    + WSQG
Sbjct: 244 EIAVFSLTHKEDPNYWSQG 262


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 101 LGLRXDASWTKIKKAHED 154
           LGL   ASW K KK  ++
Sbjct: 419 LGLHFHASWLKSKKEFKE 436



 Score = 21.0 bits (42), Expect = 7.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 58  EIRAANLTHCSFASAWSQG 114
           EI   +LTH    + WSQG
Sbjct: 251 EIAVFSLTHKEDPNYWSQG 269


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 122 SWTKIKKAHEDCVKTK 169
           +WT++ K  E C K K
Sbjct: 93  TWTRLLKNLESCAKIK 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,651
Number of Sequences: 336
Number of extensions: 2089
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)