Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N06
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118981-1|AAM50841.1|  283|Drosophila melanogaster LP01932p pro...   107   8e-24
AE014134-2858|AAF53622.2|  283|Drosophila melanogaster CG5131-PA...   107   8e-24

>AY118981-1|AAM50841.1|  283|Drosophila melanogaster LP01932p
           protein.
          Length = 283

 Score =  107 bits (258), Expect = 8e-24
 Identities = 50/76 (65%), Positives = 60/76 (78%)
 Frame = +2

Query: 116 DASWTKIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGRRIRRNS 295
           DAS   +K+AH++CVK+KAL SVLAVR I K +AV  +E+VFPKCY DLEPIGRRIRRNS
Sbjct: 206 DASPFNVKEAHQNCVKSKALASVLAVRNISKADAVAAVERVFPKCYADLEPIGRRIRRNS 265

Query: 296 DDMFRAFREAKYYGYD 343
            D  +A+ EA  YGYD
Sbjct: 266 TDQQKAYMEAPMYGYD 281



 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 16  NELDFKNMEHLACTEIRAANLTHCSFASAWSQG 114
           N++DF+N++HLACTEIRAANL HCSF SA  QG
Sbjct: 173 NDMDFRNVDHLACTEIRAANLAHCSFLSAMFQG 205


>AE014134-2858|AAF53622.2|  283|Drosophila melanogaster CG5131-PA
           protein.
          Length = 283

 Score =  107 bits (258), Expect = 8e-24
 Identities = 50/76 (65%), Positives = 60/76 (78%)
 Frame = +2

Query: 116 DASWTKIKKAHEDCVKTKALYSVLAVRQIDKLEAVDIIEKVFPKCYQDLEPIGRRIRRNS 295
           DAS   +K+AH++CVK+KAL SVLAVR I K +AV  +E+VFPKCY DLEPIGRRIRRNS
Sbjct: 206 DASPFNVKEAHQNCVKSKALASVLAVRNISKADAVAAVERVFPKCYADLEPIGRRIRRNS 265

Query: 296 DDMFRAFREAKYYGYD 343
            D  +A+ EA  YGYD
Sbjct: 266 TDQQKAYMEAPMYGYD 281



 Score = 59.3 bits (137), Expect = 4e-09
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = +1

Query: 16  NELDFKNMEHLACTEIRAANLTHCSFASAWSQG 114
           N++DF+N++HLACTEIRAANL HCSF SA  QG
Sbjct: 173 NDMDFRNVDHLACTEIRAANLAHCSFLSAMFQG 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,665,477
Number of Sequences: 53049
Number of extensions: 362283
Number of successful extensions: 658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)