Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_N05
         (825 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.73 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.73 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.73 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    24   1.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    24   1.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.7  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    24   1.7  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          24   1.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    24   1.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   6.8  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   9.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.0  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 624 PCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIF 737
           P  S G   FPN+   +   RT RK  + + +MN+ ++
Sbjct: 275 PFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 312


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 624 PCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIF 737
           P  S G   FPN+   +   RT RK  + + +MN+ ++
Sbjct: 223 PFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 260


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 624 PCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIF 737
           P  S G   FPN+   +   RT RK  + + +MN+ ++
Sbjct: 406 PFASRGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNMY 443


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 478 ASPVGHPPIESHSACKKGPAARCMAP--STPPPAFSLELAAFTIASISSLVMS 326
           +SP G  P  S S+    PAAR M P  S          AAF  A+  S+V S
Sbjct: 38  SSPSGSSPQHSSSSASTSPAAR-MYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = -3

Query: 478 ASPVGHPPIESHSACKKGPAARCMAP--STPPPAFSLELAAFTIASISSLVMS 326
           +SP G  P  S S+    PAAR M P  S          AAF  A+  S+V S
Sbjct: 38  SSPSGSSPQHSSSSASTSPAAR-MYPYVSAAHHHHQAAAAAFGAAASGSMVPS 89


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 433 KKGPAARCMAPSTPPPAFSL 374
           KKG    C+AP   PPA+ +
Sbjct: 22  KKGRFWECLAPIPQPPAYPI 41


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 27  AKYILAQIRCFSVATMVNSTKWEIE---KNRILKLSLEEKRKIYKSSDFIDLENVDPWSK 197
           +KY L + R   +A  +N T+ +I+   +NR +K   EEK K+       +  ++ P S 
Sbjct: 107 SKY-LCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQST 165

Query: 198 YLNKS 212
             N S
Sbjct: 166 SSNNS 170


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +3

Query: 27  AKYILAQIRCFSVATMVNSTKWEIE---KNRILKLSLEEKRKIYKSSDFIDLENVDPWSK 197
           +KY L + R   +A  +N T+ +I+   +NR +K   EEK K+       +  ++ P S 
Sbjct: 127 SKY-LCRPRRIQMAQNLNLTERQIKIWFQNRRMKFKKEEKNKVVTPKTSPNEASMSPQST 185

Query: 198 YLNKS 212
             N S
Sbjct: 186 SSNNS 190


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 433 KKGPAARCMAPSTPPPAFSL 374
           KKG    C+AP   PPA+ +
Sbjct: 22  KKGRFWECLAPIPQPPAYPI 41


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 147 YKSSDFIDLENVDPWSKY 200
           ++++DF+   N  PWS Y
Sbjct: 307 WQNTDFVVCFNAKPWSNY 324


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 690 LYVALCVLRDDSENRKFQWIYTEKRSILFGI 598
           LY+A  V+     N      +  KRS LFGI
Sbjct: 326 LYMAAQVIEKSVANFTAAGFFDVKRSTLFGI 356


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +2

Query: 518 HPHCWAP 538
           +PHCW P
Sbjct: 489 NPHCWVP 495


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/39 (28%), Positives = 17/39 (43%)
 Frame = +3

Query: 462 CPTGDAKVTGGYNLPAKYIIHTVGPQDGSAEKLESCYEK 578
           CP    K T    L     +HT  P D + E++++   K
Sbjct: 197 CPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVK 235


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 249 LKEFEKIKINTEKNKSISERVSIFKGDITKLE 344
           L+EF++I +   K KSI  +    K  + K+E
Sbjct: 220 LREFDQIVVILSKVKSILNKKCCEKCGLKKIE 251


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,938
Number of Sequences: 336
Number of extensions: 4139
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)