Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N05
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical pr... 165 3e-41
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 35 0.062
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 33 0.33
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class ho... 29 3.1
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 29 4.0
U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical pr... 29 5.3
AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical ... 29 5.3
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 7.1
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 28 9.3
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.3
>Z73102-4|CAA97408.1| 203|Caenorhabditis elegans Hypothetical
protein B0035.3 protein.
Length = 203
Score = 165 bits (401), Expect = 3e-41
Identities = 93/179 (51%), Positives = 110/179 (61%), Gaps = 8/179 (4%)
Frame = +3
Query: 258 FEKIKINTEKNKSISERVSIFKGDITKLEIDAIVNAANSRLKAGGGVDGAIHRAAG-PFL 434
FEK K+ K++ R+S++ GDITKL +DAIVNAANSRL GGGVDGAIHRAAG L
Sbjct: 13 FEKFKVA----KNVLGRISVWDGDITKLSVDAIVNAANSRLAGGGGVDGAIHRAAGRKQL 68
Query: 435 QAECDSIGGCPTGDAKVTGGYNL-PAKYIIHTVGPQ------DGSAEKLESCYEKCLSFQ 593
Q EC GC GDA +T G N+ K IIHTVGPQ D E L +CY L
Sbjct: 69 QEECQQYNGCAVGDAVITSGCNINHIKKIIHTVGPQVYGNVTDERRENLVACYRTSLDIA 128
Query: 594 QEYQIKSIAFPCISTGIYGFPNRLAAHIALRTARKFLETNTEMNRIIFCTFLPIDVEIY 770
E +KSIAF CISTG+YG+PN AA ++LE N + RI+ TFL ID E Y
Sbjct: 129 IENGMKSIAFCCISTGVYGYPNDDAAKTVTNFLTEYLEKNDTIERIVLVTFLDIDNEHY 187
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 35.1 bits (77), Expect = 0.062
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 81 STKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEF 260
+TK+++ LS EEKRKIY + +D + ++ K+ + KK T +D+ F
Sbjct: 57 TTKFQLLNKAYQILSDEEKRKIYDETGSVD-DEAGELNEDALKAWRMIFKKVTKEDIDSF 115
Query: 261 EK-IKINTEKNKSISERVSIFKGDITKLEIDAI 356
K + + E+ + F GDI K+ AI
Sbjct: 116 MKTYQGSREQKDELVVHYEKFNGDIAKIREYAI 148
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 32.7 bits (71), Expect = 0.33
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Frame = +3
Query: 192 SKYLNKSQGIDSKKSTTDDLKEFEKIKINTE----KNKSIS--ERVSIFK-----GDITK 338
+ Y+N + +K + TD LK+FEKI +++ + IS +++ FK GD+ K
Sbjct: 433 TSYINSVK--KTKHAETDALKDFEKIGLHSRVIGTATRGISNMQKLVDFKDLADIGDLVK 490
Query: 339 LEIDAIVNAAN----SRLKAGGGVDGAIHRAAG 425
E++ + + N + LKA G++G + A+G
Sbjct: 491 SEVEKVKDQLNDENVANLKALAGIEGQLKTASG 523
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.57
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Frame = +3
Query: 63 VATMVNSTKWEIEKNRILKLSLEE-KRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKST 239
V T+ +S WEIE+N +L+ + K K++K + +D V S + +
Sbjct: 288 VDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASEVAKRSLSSEVDESKKLMELM 347
Query: 240 TDDLKEFEK-IKINTEKNKSISERVSIFKGDI 332
+DL + E I N + K+I E + K I
Sbjct: 348 VEDLLQAESAINYNQCQKKAIFEDIDRLKDAI 379
>Z81537-2|CAB04373.1| 682|Caenorhabditis elegans Hypothetical
protein F41D3.2 protein.
Length = 682
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +3
Query: 39 LAQIRCFSVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDF--IDLENVDPWSKYL 203
+ ++R +V T+ + +++ K +ILKLS K KIY + F ID +V+ +K+L
Sbjct: 529 IGELRPPNVTTLEQDSVYQVMKQQILKLSENVKYKIYIMNAFPRIDQPSVEMIAKWL 585
>Z79757-1|CAB60999.1| 299|Caenorhabditis elegans Hypothetical
protein F55B12.1 protein.
Length = 299
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 195 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 287
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>AF026056-1|AAB81844.1| 298|Caenorhabditis elegans NK-2 class
homeodomain protein protein.
Length = 298
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 195 KYLNKSQGIDSKKSTTDDLKEFEKIKINTEK 287
K N+ GID +KS+ DD + K+K N K
Sbjct: 15 KEKNEETGIDEEKSSEDDCSKRSKVKSNPSK 45
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 60 SVATMVNSTKWEIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNK 209
S ATM+N +E +++ E+ RK +SS IDL+ + +K L K
Sbjct: 8338 SRATMLNDAIAHLENQKVVVARSEKDRKFVESSTSIDLDQLLAEAKRLLK 8387
>U97007-5|AAB52295.1| 564|Caenorhabditis elegans Hypothetical
protein ZC196.5 protein.
Length = 564
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 114 LKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEKNK 293
++++ + K K K++ +D D W Y S + D L+E K+K ++
Sbjct: 271 MEITKQRKSKAVKNNQELD----DDWGAYTTSSNAEEKISKKCDSLQEPVKLKRTESESS 326
Query: 294 SISE 305
SI+E
Sbjct: 327 SITE 330
>AF045644-3|AAC02602.2| 205|Caenorhabditis elegans Hypothetical
protein F57H12.6 protein.
Length = 205
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 186 PWSKYLNKSQGIDSKKSTTDDLKEFEKIKINTEK-NKSISER 308
PWS+ K + + K+ D+LK+F++ K EK +K E+
Sbjct: 108 PWSEKPEKIEALAEKELDGDNLKKFKEFKEKKEKEDKEYKEK 149
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 28.3 bits (60), Expect = 7.1
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 93 EIEKNRILKLSLEEKRKIYKSSDFIDLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI- 269
+IEK KLS +K + KS + + D + L + + I+ K EK+
Sbjct: 397 KIEKKVPEKLSKPQKTETTKSKE--RAKWADQGNTTLKREKSIEKSTRQGKIDKSIEKLI 454
Query: 270 --KI-NTEKNKSISERVSIFKGDITKLEID 350
I NTEK S ++ + KG++ K ++D
Sbjct: 455 DKSIDNTEKLSSQKPKIDMAKGELRKFDVD 484
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 420 AGPFLQAECDSIGGCPTGDAKVTGGYNLP 506
AGP +Q + GG P KVT G N+P
Sbjct: 1126 AGPMIQQGKNIAGGYPPNQNKVTPGKNVP 1154
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 269
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 270 KINTEKNKSISERVSIFK 323
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 269
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 270 KINTEKNKSISERVSIFK 323
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Frame = +3
Query: 96 IEKNRILKLSLEEKRKIYKSSDFI--DLENVDPWSKYLNKSQGIDSKKSTTDDLKEFEKI 269
+EK R L+ E +K+ ++ + D++ ++ K + + + I KK + + E E+
Sbjct: 771 VEKTRSLEEQEERSKKLRAETELLRKDMQELETDKKTVKEFE-IKYKK--LESIFETERE 827
Query: 270 KINTEKNKSISERVSIFK 323
K+N E+N+S +E ++ K
Sbjct: 828 KMNGERNRSKNELAAMKK 845
>Z46792-1|CAA86764.1| 266|Caenorhabditis elegans Hypothetical
protein C52A11.2 protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Frame = +3
Query: 129 EEKRKIYKSSDFIDLENVDPWSKYLNK--SQGIDS-------KKS--TTDDLKEFEKIKI 275
+E +K+ + ++ + D W K+LN SQ DS +KS TT L + I+I
Sbjct: 172 KENKKVRFAQNYTTSQITDVWKKFLNTVISQMTDSFELERAKQKSAQTTKALAPHQHIEI 231
Query: 276 NTEKNKSISERVS 314
+ K K ++E+ S
Sbjct: 232 SERKKKRVAEKQS 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,197,871
Number of Sequences: 27780
Number of extensions: 393948
Number of successful extensions: 1297
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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