Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N04
(836 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 59 9e-10
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 58 1e-09
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 47 4e-06
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 42 1e-04
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 40 6e-04
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 38 0.002
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 38 0.002
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 36 0.007
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 36 0.007
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 36 0.009
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 36 0.009
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 35 0.016
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 34 0.029
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 33 0.050
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 33 0.050
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 33 0.066
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 31 0.15
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 31 0.20
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 31 0.20
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 31 0.27
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 30 0.35
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 30 0.35
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 30 0.35
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 30 0.47
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 30 0.47
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 30 0.47
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 29 0.62
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 29 0.62
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 29 1.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 1.1
SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55 family|S... 29 1.1
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 28 1.4
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 28 1.4
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 28 1.9
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 1.9
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 28 1.9
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 1.9
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 2.5
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 27 3.3
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 27 3.3
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 27 3.3
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 27 3.3
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 27 3.3
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 27 3.3
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 3.3
SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase Rdh54... 27 4.4
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 26 5.8
SPAC18G6.07c |mra1||ribosome biogenesis protein Mra1|Schizosacch... 26 5.8
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 26 7.6
SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces po... 26 7.6
SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein S16|Sc... 26 7.6
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 7.6
SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein S16|Schizosa... 26 7.6
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 58.8 bits (136), Expect = 9e-10
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Frame = +3
Query: 240 AVLQDMHIKCFDTRT-DCS-KPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWD 413
+V D ++ D R D S KP+ S+ +AH + + FNP+ F LA+ D + +WD
Sbjct: 252 SVSYDQYLHVHDIRRPDASTKPARSV-HAHSGPIHSVAFNPHNDFILATCSTDKTIALWD 310
Query: 414 YRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTG 593
RN + + H V + ++ + E +L + S+D R L++ + I D + + G
Sbjct: 311 LRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDG 370
Query: 594 KILEDGVLQSYEQHEDSVYCXEWSTVEPWTFASLSYDARLVI 719
+L + H +W WT A+ + D L I
Sbjct: 371 ---PPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQI 409
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
H D+D+ PN + +A+A +D L IW
Sbjct: 381 HTSCTIDMDWCPNYNWTMATAAEDNILQIW 410
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 58.4 bits (135), Expect = 1e-09
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Frame = +3
Query: 213 NPHQGHPQFAVL-----QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLA 377
N Q HPQ L D ++ DTR + + + + AH + + + NP + LA
Sbjct: 239 NDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLA 298
Query: 378 SAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDGRGLLYAAASI 557
+A D + +WD RN + + H V+ + ++ + E +L + S+D R ++ I
Sbjct: 299 TASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKI 358
Query: 558 CRDPDDDSEKTGKILEDG---VLQSYEQHEDSVYCXEWSTVEPWTFASLSYDARLVI 719
E+T + EDG +L + H + + W E W SL+ D L I
Sbjct: 359 ------GEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGSLADDNILQI 409
Score = 49.6 bits (113), Expect = 5e-07
Identities = 43/135 (31%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRT--DHSHWVWTVRYNSYH 494
H +V D+ F+P + LAS DD L I D R E + HS + V N ++
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFN 293
Query: 495 EQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVYCXEWSTVE 674
+ LL T S+D L+ R+P L + E HED VY EWS +
Sbjct: 294 DYLLATASADKTVALWD----LRNPYQR------------LHTLEGHEDEVYGLEWSPHD 337
Query: 675 PWTFASLSYDARLVI 719
AS S D R+ I
Sbjct: 338 EPILASSSTDRRVCI 352
Score = 29.9 bits (64), Expect = 0.47
Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 9/95 (9%)
Frame = +3
Query: 267 CFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK------ 428
C D T ++ H L +NPN +LA+ +D + +WD +
Sbjct: 163 CHDALTTGEALPQAVLKGHTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSET 222
Query: 429 ---EPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
PI H+ V V+++ HE LL + S D
Sbjct: 223 KVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDD 257
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 46.8 bits (106), Expect = 4e-06
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Frame = +3
Query: 57 EIRCAEWHPTDAGRLGVV--YESSVRVHDVSSGAAVCSM-------KSDGRTRLKLTAGK 209
EI W P D+ ++ + Y+S+ R+ DV+ + + G +R+ +T+
Sbjct: 199 EITDGCWQP-DSSQIFLTTGYDSTARIWDVNRTKSQLEVFVHVPEGSHTGLSRIPVTSCA 257
Query: 210 WNPHQGHPQFAVLQDMHIKCFDTRTDCSKPSWSIDNAH--RQLVRDLDFNPNRQFHLASA 383
WNP + + D I+ + + +P I +AH +Q + L F+ + + L S
Sbjct: 258 WNPAKPDNFATAVLDGSIQFWQKGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNY-LLSR 316
Query: 384 GDDAALNIWDYRNGKEPIFNRTD 452
G+D AL +WD RN + + R D
Sbjct: 317 GEDNALRVWDLRNSNKCVNERID 339
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 41.9 bits (94), Expect = 1e-04
Identities = 37/135 (27%), Positives = 66/135 (48%)
Frame = +3
Query: 111 YESSVRVHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQFAVLQDMHIKCFDTRTDC 290
+ SV + D ++ +M G T ++ A WN H + +D HI D R
Sbjct: 311 HNGSVEIWDAATCKKTRTMS--GHTE-RVGALSWNDHV---LSSGGRDNHILHRDVRAP- 363
Query: 291 SKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVW 470
+ + + AHRQ V L++N N LAS G+D AL +WD + ++P+++ +H V
Sbjct: 364 -EHYFRVLTAHRQEVCGLEWNSNENL-LASGGNDNALMVWD-KFEEKPLYSFHNHIAAVK 420
Query: 471 TVRYNSYHEQLLLTG 515
+ ++ + +L +G
Sbjct: 421 AITWSPHQRGILASG 435
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 39.5 bits (88), Expect = 6e-04
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +3
Query: 309 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNS 488
I AH VRD+ F+PN +A DD +L +W++ E + T H W V+
Sbjct: 159 IVQAHEMEVRDVAFSPN-DSKFVTASDDGSLKVWNFHMSTEEL-KLTGHG---WDVKTVD 213
Query: 489 YH--EQLLLTGSSD 524
+H + LL +GS D
Sbjct: 214 WHPSKGLLASGSKD 227
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
+ H VR + F+P LA+AGD + I+D +G + + H+ W++ V +N
Sbjct: 184 SGHTSPVRSVAFSPGSTL-LAAAGDSKMITIYDVLSG-DQVGQLRGHAAWIFAVAFNPVG 241
Query: 495 EQLLLTGSSDGR 530
+ LLL+ +G+
Sbjct: 242 D-LLLSADVEGK 252
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTD-HSHWVWTVRYNSYH 494
AH++ + +P+ + HLA+ DA +NIW + + R H WVW + S
Sbjct: 213 AHQRYITRCVLSPDVK-HLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAF-SAD 270
Query: 495 EQLLLTGSSDGRGLLYAAAS 554
L+T SSD L+ +S
Sbjct: 271 STYLVTASSDHVARLWELSS 290
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 35.9 bits (79), Expect = 0.007
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIW----DYR-----NGKEPIFNRTDHSHWVWT 473
H V D D+NP LAS GDD+ + IW DY PI HS V
Sbjct: 80 HTAAVLDTDWNPFHDQVLASGGDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGL 139
Query: 474 VRYNSYHEQLLLTGSSD 524
V+Y+ +L + S+D
Sbjct: 140 VQYHPTAANVLASSSAD 156
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 35.9 bits (79), Expect = 0.007
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTG 515
LAS G+D + IWD R+ P F +T+H+ V V + + LL TG
Sbjct: 319 LASGGNDNVVQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATG 365
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/122 (24%), Positives = 48/122 (39%)
Frame = +3
Query: 120 SVRVHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQFAVLQDMHIKCFDTRTDCSKP 299
++ V DV+ A + R KL ++P QD IK +D + S
Sbjct: 115 NLNVWDVNLEALLYDFNEHSRAVHKLDISSFHPSY---VLTASQDGLIKLWDYKESSSTI 171
Query: 300 SWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVR 479
++ + + RD+ F+P+ +A D L WD R K P H+ V V
Sbjct: 172 TF---RGNSEAARDVVFSPSEPNEFVAAYDSGILQKWDIRFPKLPFLKLAAHNGVVLCVN 228
Query: 480 YN 485
Y+
Sbjct: 229 YS 230
Score = 32.3 bits (70), Expect = 0.088
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 399 LNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDG 527
LN+WD N + +++ +HS V + +S+H +LT S DG
Sbjct: 116 LNVWDV-NLEALLYDFNEHSRAVHKLDISSFHPSYVLTASQDG 157
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 431
AH +V ++++PN F LAS G D + IWD + K+
Sbjct: 219 AHNGVVLCVNYSPNGVF-LASCGRDKTIRIWDSTSNKK 255
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 35.5 bits (78), Expect = 0.009
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +3
Query: 225 GHPQFAVL--QDMHIKCFDTRTDCSKPS------WSIDNAHRQLVRDLDFNPNRQFHLAS 380
G+P F QD +K F+ + +K W+I AH + V + + + + +AS
Sbjct: 425 GYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTI-KAHDRDVNAIQVSKDGRI-IAS 482
Query: 381 AGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
A D + +WD G E + H VW +N + Q L +GS D
Sbjct: 483 ASQDKTIKLWDSSTG-EVVGVLRGHRRGVWACSFNPFSRQ-LASGSGD 528
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 34.7 bits (76), Expect = 0.016
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = +3
Query: 228 HPQFAVL----QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDA 395
HP A L D + +D RT + + NAH V L + + LASA +
Sbjct: 496 HPNAAYLATGSSDHTTRMWDVRTGGTV---RVFNAHHSPVSALCMSADG-LSLASADESG 551
Query: 396 ALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
+ +WD R+ + + + HS V+++ + SY ++L++G +D
Sbjct: 552 IIKVWDLRSSNQHV-SFVKHSSIVYSLSF-SYDNKILVSGGAD 592
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 33.9 bits (74), Expect = 0.029
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
+ H VR + F+P + + S GDD +N+W+Y++ ++ +F+ H +V + +H
Sbjct: 50 DGHDGPVRGIAFHPTQPLFV-SGGDDYKVNVWNYKS-RKLLFSLCGHMDYVRVCTF--HH 105
Query: 495 EQLLLTGSSD 524
E + SD
Sbjct: 106 EYPWILSCSD 115
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 33.1 bits (72), Expect = 0.050
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTG 515
LAS G+D L +WDYR+ + P+ +H+ V + ++ + +L +G
Sbjct: 264 LASGGNDNNLFVWDYRSSR-PLHKFEEHTAAVKAIGWSPHQRGILASG 310
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 33.1 bits (72), Expect = 0.050
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
N H + F+P+ L + D +WD + + PI H++WV V + +
Sbjct: 131 NGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDC-DTQTPIATMKGHTNWVSCVAW-APD 188
Query: 495 EQLLLTGSSD 524
++ TGS D
Sbjct: 189 ASIIATGSMD 198
Score = 27.5 bits (58), Expect = 2.5
Identities = 35/116 (30%), Positives = 45/116 (38%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDGRGLLYAAA 551
L SA DD L +WD + +PI H V + S+ S DGR + A A
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQK---VVNHASF--------SPDGRCI--ATA 407
Query: 552 SICRDPDDDSEKTGKILEDGVLQSYEQHEDSVYCXEWSTVEPWTFASLSYDARLVI 719
S KTGK L + H +VY WST + S S D L +
Sbjct: 408 SFDSSVRLWDGKTGKF-----LATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKV 457
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 32.7 bits (71), Expect = 0.066
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 249 QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
+D IK +D T + +S H Q + LDF+ N +F ++ +GD A +WD G+
Sbjct: 380 EDRQIKLWDLSTQKVRYVFS---GHEQDIYSLDFSHNGRFIVSGSGDRTA-RLWDVETGQ 435
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 31.5 bits (68), Expect = 0.15
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYN 485
H V + NP+RQ SAG DA + IW+ +G E + HS+ V V +N
Sbjct: 616 HVGRVYSVTINPSRQ-QCISAGTDAKIRIWNLESG-ELLQTLHGHSNLVSQVTFN 668
Score = 30.7 bits (66), Expect = 0.27
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Frame = +3
Query: 219 HQGHPQFAVLQDMHIKCFDTRTDCSKPSWSIDNA--------HRQLVRDLDFNPNRQFHL 374
H G + +C TD W++++ H LV + FN N
Sbjct: 616 HVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQVTFNQNILVS- 674
Query: 375 ASAGDDAALNIWDYRNG 425
ASA D +L +WD G
Sbjct: 675 ASAPPDTSLRVWDLNTG 691
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 267 CFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
C+ + + P + H+ V ++DF+P +AS DD L+IW
Sbjct: 354 CYVWNFNKANPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIW 401
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 31.1 bits (67), Expect = 0.20
Identities = 24/91 (26%), Positives = 41/91 (45%)
Frame = +3
Query: 252 DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 431
D I +D RT S P + R + +NP F+ + +D L ++D RN K
Sbjct: 209 DRSIVIYDLRT--SSPLTKLITKLR--TNSISWNPMEAFNFVAGSEDHNLYMYDMRNLKR 264
Query: 432 PIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
+ DH V +V ++ ++ ++GS D
Sbjct: 265 ALHVYKDHVSAVMSVDFSPTGQE-FVSGSYD 294
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 30.7 bits (66), Expect = 0.27
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEP-IFNRTDHSHWVWTVRYNSY-H 494
H V LD++ + +F L S DD L +WD N +P T H +++ ++ Y +
Sbjct: 44 HTGCVNTLDWSADGEF-LLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPYSN 102
Query: 495 EQLLLTGSSD 524
+ +L+ S D
Sbjct: 103 NRQILSASGD 112
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 30.3 bits (65), Expect = 0.35
Identities = 36/158 (22%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +3
Query: 75 WHPTDAGRL-GVVYESSVRVHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQFAVL- 248
W P D G ++ +++V DVS+ + + + + W+P H A
Sbjct: 111 WFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDM----IYSHAWSPIASHCLIATAY 166
Query: 249 QDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
+ I+ D ++ S S H V +D+ P +F LAS D +WD R
Sbjct: 167 RSSSIRLCDMQSGSYTHSLS---GHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVS 223
Query: 429 EPIFNRTDHSHWVWTVRYNSYHEQLL--LTGSSDGRGL 536
H+ ++ + + N H + L +SD R L
Sbjct: 224 SSFACMDLHNKYLPSNQTNISHYGTVNGLAWTSDARYL 261
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 30.3 bits (65), Expect = 0.35
Identities = 20/73 (27%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Frame = +3
Query: 318 AHRQLVRDLDFNP-NRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
AH + V +++ P + +L +AGDD + +WDY+ K + H++ V + +H
Sbjct: 182 AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQT-KACVRILEGHTN---NVSFAFFH 237
Query: 495 EQ--LLLTGSSDG 527
+ ++++GS DG
Sbjct: 238 SKFPIIISGSEDG 250
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 252 DMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 416
DM IKCF+ D S H + V L NP AS+ D + +W +
Sbjct: 119 DMTIKCFNW--DMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSF 171
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.35
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 369 HLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
+LASA DD + IWD+ + + H+++V ++ +N LL++GS D
Sbjct: 110 YLASASDDKTIRIWDFEK-RCSVRCLKGHTNYVSSIDFNPL-GTLLVSGSWD 159
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 29.9 bits (64), Expect = 0.47
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 393 AALNIWDYRNGKEPIFNRTD-HSHWVWTVRYNSYHEQLLLTGSSDG 527
A++ +WD R+ ++ I D H+ + ++++ +LLLTGS DG
Sbjct: 124 ASVQLWDVRSEQKLIRQWNDAHNDDITHLQFHPKDNELLLTGSVDG 169
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 29.9 bits (64), Expect = 0.47
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRN 422
+ H + V + +NP + ASAGDD + IW ++
Sbjct: 467 SGHVKCVNYVAYNPVDPYQFASAGDDNTVRIWSNKD 502
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.9 bits (64), Expect = 0.47
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQ 500
H+ V + NP AS G D IWD G E I T H + + + S+
Sbjct: 60 HKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTG-EQICQLTGHKDSIVAIDW-SFDGT 117
Query: 501 LLLTGSSDGRGLLYAAAS 554
+ TG D + L+ +++
Sbjct: 118 YIATGGMDSQVRLWKSST 135
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQ 500
H Q V D F PN + L +A D + WD R+G + + T H + + ++
Sbjct: 325 HEQAVIDCKFLPNTPY-LLTACADCVIRKWDVRSG-QLLGEYTGHQEPILCMAITPDGKR 382
Query: 501 LLLTGSSDGRGLLY 542
++TGS D L++
Sbjct: 383 -VVTGSDDTELLVF 395
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.62
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNR--TDHSHWVWTVRYNSY 491
AH ++F+P+ + HLA G DA ++WD +E I R T + + T+ + SY
Sbjct: 192 AHNSNCFCIEFSPDNR-HLAIGGADAITSLWD---PQELICERSITRMDYPIRTLSF-SY 246
Query: 492 HEQLLLTGSSD 524
+ L +GS D
Sbjct: 247 DSRYLASGSED 257
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.5 bits (63), Expect = 0.62
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 483 NSYHEQLLLTGSSD--GRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVYCX 656
+SYH +L SS+ LL + ++ D + K + ++S+ H D V C
Sbjct: 250 DSYHTDAVLALSSNRNAHNLLVSGSA------DTTLKLWDLSTCNCVKSFTYHSDKVSCL 303
Query: 657 EWSTVEPWTFASLSYD 704
+W + P S SYD
Sbjct: 304 DWYSKAPSVLLSGSYD 319
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 369 HLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNS 488
H +G+D ++ +WD R GK F TD + +W V +++
Sbjct: 640 HKIISGNDGSVKLWDVRTGKLLRFLLTDLTK-IWHVDFDA 678
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 333 VRDLDFNPNRQFHLASAGDDAALNI---WDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQL 503
V + ++PN LA+A DD I WD R P T H ++ +
Sbjct: 216 VNSIAWHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTF 275
Query: 504 LLTGSSDGRGLLY 542
LL+ DGR +++
Sbjct: 276 LLSSGKDGRAMVW 288
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 342 LDFNPNRQFHLASAGDDAALNIWDYRNGKEPI-FNRTDHSHWVWTVRYNSYHEQLLLTGS 518
LDFN + LAS + + +WD ++ ++P + + S V V +N+ +L +G+
Sbjct: 123 LDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILASGN 182
Query: 519 S 521
+
Sbjct: 183 A 183
>SPAC1A6.02 ||SPAC23C4.21|WD repeat protein, human WDR55
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 361
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/96 (20%), Positives = 37/96 (38%)
Frame = +3
Query: 240 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 419
+V D +K DT T W +D + A+ D+ +++WD R
Sbjct: 76 SVGSDGVLKIADTSTGRVSSKWIVDKNKEISPYSVVQWIENDMVFATGDDNGCVSVWDKR 135
Query: 420 NGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDG 527
I DH ++ ++ + + E+ + S DG
Sbjct: 136 TEGGIIHTHNDHIDYISSI--SPFEERYFVATSGDG 169
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
+AH+ V F P S DD + +WD G ++ + H +V T + S
Sbjct: 120 DAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWDLSTGAVQ-YDLSGHEDYVRTASWMS-- 176
Query: 495 EQLLLTGSSDG 527
L++G DG
Sbjct: 177 ATRLVSGGYDG 187
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
H+ VR L + + + LAS GDD L IW+ G+
Sbjct: 378 HKGRVRCLSVHVSGNW-LASGGDDGVLRIWEVMTGR 412
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 27.9 bits (59), Expect = 1.9
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +3
Query: 348 FNPNRQFHLASAGDDAALNIWDYRN-----GK-EPIFNRTDHSHWV--WTVRYNSYHEQL 503
F P F + SA DD LN+W+ R+ GK P +R + V+YN ++QL
Sbjct: 264 FVPQGNFVIGSA-DDRTLNVWNLRHTFHHKGKTRPPEHRIVSQSIINPGLVKYNPRYDQL 322
Query: 504 LLTGS 518
L GS
Sbjct: 323 LTAGS 327
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.9 bits (59), Expect = 1.9
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Frame = +3
Query: 198 TAGKWNPHQGHPQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHR-QLVRDLDFNPNRQFHL 374
T KWN H A ++ +D R S P +I + + L+FN + L
Sbjct: 370 TQVKWNYKNPHI-LASSHGRLVRIWDDRYG-SAPLHTIKTSENITKINGLEFNRACETRL 427
Query: 375 ASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLL 509
+ D + W+Y E + VW R+ + + ++L
Sbjct: 428 LTCAMDRTVKFWNYEKSTEEPEHLITTDSPVWKARFTPFGDGVIL 472
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 390 DAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDG 527
D +L ++D +PI +H + + N+ ++++TGS DG
Sbjct: 81 DGSLRLFDLTMPSKPIHKWKEHKAEIVAIDTNTVDRRIVVTGSWDG 126
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
++S G+DA IWD R+GK I +H + + ++ QL + + D
Sbjct: 322 VSSGGNDAIGRIWDLRSGKS-IMVLDEHIRQIVAMAWSPNGYQLATSSADD 371
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQ---LLLTGSSDGRGLLY 542
L + GD + +WD+R + +T S +E LL+TGSSDG LY
Sbjct: 1005 LITLGDKDIIQVWDWRRNRCLNSFKTSASATTNVTDMQLLNEDDVALLMTGSSDGTIKLY 1064
Score = 26.2 bits (55), Expect = 5.8
Identities = 21/95 (22%), Positives = 39/95 (41%)
Frame = +3
Query: 240 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 419
A D ++ +D R + H + +++ + L SA D + +WD R
Sbjct: 1150 AGFSDGVLRVYDKRLPARDSLTDVWKEHSSEIVNVEMQSSGMRELISASSDGEVKLWDIR 1209
Query: 420 NGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
TD+S + ++ +S H + TGSS+
Sbjct: 1210 MNHSLQTFSTDNS-GLTSLTVHS-HAPVYATGSSN 1242
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 349 KSRSRTNCLCALSMLQDGFEQSVRVSKHFMCMSCRTAN 236
+S S +C C + + + QS K+ +C+SC N
Sbjct: 230 QSDSPQHCYCCGNKFNESYYQSQTAQKYNVCISCYQQN 267
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 27.1 bits (57), Expect = 3.3
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Frame = +3
Query: 279 RTDCSKPSWSID-NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK-----EPIF 440
R + + W D N + +DF N A+ G D+ + IW + E +
Sbjct: 2 RAEVLQIRWHYDANDDHTPIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKVEYLS 61
Query: 441 NRTDHSHWVWTVRYNSYHEQLLLTGSSDGRGLLY 542
+ H+ V VR+N +L T +G +L+
Sbjct: 62 TLSRHTQAVNVVRFNP-EGNILATAGDEGTIMLW 94
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
H V+ L F N + + + DD+ + IWD R +
Sbjct: 374 HSSPVKTLQFGENGYWLVVTTNDDSDIFIWDLRKSE 409
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 492 HEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVY 650
+EQ++ + D GL+Y+ + SE+T IL D S++ ED+ Y
Sbjct: 119 YEQVIFQWNCDNEGLVYSQDGVPLQAFSGSERTDFILPD----SWKTTEDTFY 167
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 33 LPTRKAEEEIRCAEWHPTDAGRLGVVYESSVRVHDV-SSGAAVCSM 167
L KA +I AE PTD RLG+ SV +++ S + C +
Sbjct: 150 LEAYKAASDIAVAELPPTDPMRLGLALNFSVFYYEILDSPESACHL 195
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD 413
H+ V + + P + LA+ GDD +++WD
Sbjct: 314 HKGDVNAVKWMPGSKSKLATCGDDCVVSLWD 344
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 3.3
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYH 494
N H Q V + P+ +ASA + +++WD G+ I H ++++ + S
Sbjct: 502 NGHTQPVTAVAIAPDGHT-MASADSEGLIHLWDIGTGRR-IKTMRGHRGNIYSLSF-SRE 558
Query: 495 EQLLLTGSSD 524
+L++G SD
Sbjct: 559 STVLVSGGSD 568
>SPAC22F3.03c |rdh54|tid1, mug34|ATP-dependent DNA helicase
Rdh54|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 138 VSSGAAVCSMKSDGRTRLKLTAGKWNPHQ 224
+SS A C + G TRL + WNP Q
Sbjct: 607 LSSKAGGCGLNLTGSTRLIIYEPSWNPAQ 635
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNG 425
H + L F+ N HL S D ++ IWD R+G
Sbjct: 535 HTAPISSLQFDSN---HLYSGSYDNSVRIWDLRSG 566
>SPAC18G6.07c |mra1||ribosome biogenesis protein
Mra1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -2
Query: 148 PELTSCTLTLDSYTTPKRPASVGCHSAQRISSSAFLVGKRAHGPSD 11
P TL+ D+ T P R + Q S +G AHGP D
Sbjct: 280 PNCRKATLSFDAPTVPPRKY---LETLQPNQSVCIAIGAMAHGPDD 322
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 208 LPAVSLSLVRPSDFMLHTAAPELTSCTLTLDSYTTPK 98
LP+ +++ P L + PEL TLD+Y P+
Sbjct: 288 LPSEGYAILEPPPGYLESIHPELLQKGTTLDTYHVPQ 324
>SPAC343.15 |||tRNA isopentenyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 434
Score = 25.8 bits (54), Expect = 7.6
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +3
Query: 3 HSPSDGPCARLPTRKAEEEIRCAEWHPTDAGRL 101
H D P A L K + + +WHP D ++
Sbjct: 136 HILDDDPSAMLSYLKKIDPVMAEQWHPRDTRKI 168
>SPAC664.04c |rps1602|rps16-2, rps16|40S ribosomal protein
S16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 674 LHGAPLXTVHGVFMLLVRLQHAVL*NLPGFFAIVVRVSADAGGRVQQAPTIRAA 513
++GAPL V + + + ++ F + +RV GG V Q IR A
Sbjct: 28 VNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQA 81
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 7.6
Identities = 20/80 (25%), Positives = 30/80 (37%)
Frame = +3
Query: 285 DCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 464
D S S H V ++PN LA+ G D +WD R + N
Sbjct: 287 DIRSNSVSAKLPHSDSVLTGSWHPNGNI-LATGGQDTTAKVWDIRALGKSFRNLGSQMSA 345
Query: 465 VWTVRYNSYHEQLLLTGSSD 524
V + ++ E L +T +D
Sbjct: 346 VTNLCFSPLGESLAVTEQAD 365
>SPBC18H10.14 |rps1601|rps16-1|40S ribosomal protein
S16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 140
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 674 LHGAPLXTVHGVFMLLVRLQHAVL*NLPGFFAIVVRVSADAGGRVQQAPTIRAA 513
++GAPL V + + + ++ F + +RV GG V Q IR A
Sbjct: 28 VNGAPLSLVQPEILRMKVYEPILVAGADKFAGVDIRVRVSGGGHVSQIYAIRQA 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,553,858
Number of Sequences: 5004
Number of extensions: 76053
Number of successful extensions: 343
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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