Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N04
(836 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33239| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20) 39 0.004
SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34) 39 0.004
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 37 0.018
SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 36 0.041
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.094
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 34 0.12
SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32) 34 0.16
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 34 0.16
SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07) 33 0.22
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 33 0.29
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28) 32 0.66
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 31 0.88
SB_32323| Best HMM Match : WD40 (HMM E-Value=0) 31 1.2
SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22) 31 1.5
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14) 31 1.5
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10) 30 2.7
SB_52312| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05) 30 2.7
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_53453| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24) 29 3.5
SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10) 29 3.5
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.7
SB_15788| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 6.2
SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06) 29 6.2
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14) 28 8.2
SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11) 28 8.2
SB_10798| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17) 28 8.2
>SB_33239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +3
Query: 564 DPDDDSEKTGKI--LEDGVLQSYEQHEDSVYCXEWSTVEPWTFASLSYDAR 710
D D+D G DGV+ SY++HEDSVY EWST +PW FASLSYD +
Sbjct: 16 DEDEDQRDKGSSGPASDGVIASYDEHEDSVYAVEWSTADPWVFASLSYDVQ 66
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 65.3 bits (152), Expect = 6e-11
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
Frame = +3
Query: 240 AVLQDMHIKCFDTR-TDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 416
+V D + +DTR T+ +K + ++D AH V L FNP +F LA+ D + +WD
Sbjct: 293 SVADDHKLMIWDTRQTNSNKAAHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDL 351
Query: 417 RNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGK 596
RN K + + H ++ V+++ ++E +L + +D R ++ + I + + + G
Sbjct: 352 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAEDAEDG- 410
Query: 597 ILEDGVLQSYEQHEDSVYCXEWSTVEPWTFASLSYD 704
+L + H + W+ EPW S+S D
Sbjct: 411 --PPELLFIHGGHTAKISDFSWNPNEPWVLCSVSED 444
Score = 38.7 bits (86), Expect = 0.006
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Frame = +3
Query: 303 WSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR--NGKEPIFNRTDHSHWVWTV 476
W I + + +D+ ++ + S DD L IWD R N + H+ V +
Sbjct: 271 WDISSG---ISKDVSWHLLHESLFGSVADDHKLMIWDTRQTNSNKAAHTVDAHTAEVNCL 327
Query: 477 RYNSYHEQLLLTGSSDGRGLLYAAASICRDPDDDSEKTGKILEDGVLQSYEQHEDSVYCX 656
+N Y E +L TGS+D L+ ++ K+ L S+E H+D ++
Sbjct: 328 SFNPYSEFILATGSADKTVALWDLRNL------------KL----KLHSFESHKDEIFQV 371
Query: 657 EWSTVEPWTFASLSYDARL 713
+WS AS D RL
Sbjct: 372 QWSPHNETILASSGTDRRL 390
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 309 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
I H + D +NPN + L S +D + +W
Sbjct: 417 IHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 450
>SB_14705| Best HMM Match : WD40 (HMM E-Value=3.6e-20)
Length = 215
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/69 (30%), Positives = 33/69 (47%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHE 497
AH V + F +R F S DD + +WD RN K +F+ H+ WV ++ Y
Sbjct: 110 AHSDCVNCVRFLDSRSFLTCS--DDKTICLWDARNLKSNVFSLVGHTSWVKSIEYCRESG 167
Query: 498 QLLLTGSSD 524
+L+ + D
Sbjct: 168 KLVTSAFDD 176
>SB_34659| Best HMM Match : WD40 (HMM E-Value=1.1e-34)
Length = 292
Score = 39.1 bits (87), Expect = 0.004
Identities = 36/127 (28%), Positives = 63/127 (49%)
Frame = +3
Query: 111 YESSVRVHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQFAVLQDMHIKCFDTRTDC 290
Y+ V++ D S+ + +M DG + ++ A WN G + +D I DTR+
Sbjct: 83 YKGLVQIWDASAQKKLLTM--DGHSA-RVGALAWN---GDMLSSGSRDRLILQRDTRSPT 136
Query: 291 SKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVW 470
+ HRQ V L ++P+ Q HLAS G+D L +W+ +G PI ++H+ V
Sbjct: 137 QLERRLV--GHRQEVCGLKWSPDHQ-HLASGGNDNKLLVWNL-SGSTPIQQYSEHTAAVK 192
Query: 471 TVRYNSY 491
+ ++ +
Sbjct: 193 AISWSPH 199
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +3
Query: 306 SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYN 485
++ AH VR +DF+ + Q L +A DD +L +W K +++ H +WV ++
Sbjct: 22 TVFKAHTATVRSVDFSGDGQ-SLLTASDDKSLKVWTVHRQKF-LYSLNAHMNWVRCAKF- 78
Query: 486 SYHEQLLLTGSSD 524
S +L+++GS D
Sbjct: 79 SPDGRLIVSGSDD 91
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHE 497
AH++ VR L F+P + AS DD + IWD+ E R H V + ++ H+
Sbjct: 111 AHKEPVRGLSFSPTDNKY-ASCADDGLVKIWDFYRCMEEKTLR-GHGADVKCIDWHP-HK 167
Query: 498 QLLLTGSSDGR 530
LL++GS D +
Sbjct: 168 SLLVSGSKDSQ 178
>SB_53276| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 36.3 bits (80), Expect = 0.031
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 261 IKCFDTRTDCSKPSWS-IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 437
+K +D R +KPS + + + R + +D +P + LA+ G D L+IWD R + P+
Sbjct: 175 VKMWDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDGVLSIWDMRQEQYPV 234
Query: 438 FNRTDHS 458
HS
Sbjct: 235 TLLEGHS 241
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 35.9 bits (79), Expect = 0.041
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 372 LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
+ + G D ++ +WDY GKE + DH+ V+T+ S H L++G+ D
Sbjct: 721 IITGGADGSIRVWDYETGKE-LNKLLDHTKLVYTLAL-SPHADFLVSGAFD 769
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD------YRNGKEPIFNRTDHSHWVWTVRY 482
H+ V DL +NP +A+ +DA + IW + N EP+ H + V VR+
Sbjct: 14 HKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEHGLHSNISEPLVTLEYHQNRVGIVRW 73
Query: 483 NSYHEQLLLTGSSD 524
+ +LL+ S D
Sbjct: 74 HPVASNILLSSSHD 87
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD------YRNGKEPIFNRTDHSHWVWTVRY 482
H+ V DL +NP +A+ +DA + IW + N EP+ H + V VR+
Sbjct: 78 HKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEHGLHSNISEPLVTLEYHQNRVGIVRW 137
Query: 483 NSYHEQLLLTGSSD 524
+ +LL+ S D
Sbjct: 138 HPVASNILLSSSHD 151
>SB_47704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 34.7 bits (76), Expect = 0.094
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 327 QLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLL 506
Q +R L F+ ++ LAS DD A N+WD + K +H + ++ +E LL
Sbjct: 126 QAIRGLQFSHFKKALLASVSDDGASNLWDTNSRKLVTSFVNEHKAPATALAFSPANEMLL 185
Query: 507 LTGSSDGRGLLY 542
+ D + + Y
Sbjct: 186 TSVGLDKKIVFY 197
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 34.3 bits (75), Expect = 0.12
Identities = 25/100 (25%), Positives = 45/100 (45%)
Frame = +3
Query: 207 KWNPHQGHPQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAG 386
KWN + A D ++ +D R + P I AH + +D++ LA+
Sbjct: 46 KWNKEDRNV-LATSHDGDVRIWDLRKG-NTPVVYI-TAHLSKIHGVDWSRTSGTALATCS 102
Query: 387 DDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLL 506
+DA++ +W+ N ++P T + VW RY + +L
Sbjct: 103 NDASVKLWNTENPRQPEAKLTVTAP-VWRARYTPFGHGVL 141
>SB_17098| Best HMM Match : WD40 (HMM E-Value=8.9e-32)
Length = 808
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFH--LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYN-S 488
AH V ++F+P + H LASAG D ++I+D I DHS + ++++N
Sbjct: 394 AHESEVLCVEFSPPQSGHKLLASAGRDRLIHIFDMNKDFSLIQTLDDHSASITSIKFNVD 453
Query: 489 YHEQLLLTGSSDGRGLLYAAASICRDPD 572
+ L S + +++ +A ++PD
Sbjct: 454 DNGDFQLLSCSADKSIIFRSAQ--QNPD 479
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 33.9 bits (74), Expect = 0.16
Identities = 28/124 (22%), Positives = 58/124 (46%)
Frame = +3
Query: 60 IRCAEWHPTDAGRLGVVYESSVRVHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQF 239
+ C + D+ + + +V++ D SSG V G T+ ++ + ++P
Sbjct: 555 VNCCAFSHDDSRIISCSADQTVKIWDASSGEGVLCFV--GHTQ-EVFSCSFSPDDTKA-V 610
Query: 240 AVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 419
+ D +K +D++T + + AH +VR F+P+ +AS DD + IW+
Sbjct: 611 SCSADRTVKVWDSKTGVC---YHVYMAHTDIVRWCCFSPDGG-KVASCSDDNTVRIWEAS 666
Query: 420 NGKE 431
+G++
Sbjct: 667 SGED 670
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 431
H +VR + F+P+ + + DD + IWD +GKE
Sbjct: 968 HPDVVRSISFSPDNM--ICTGCDDGIVRIWDSVSGKE 1002
>SB_36049| Best HMM Match : WD40 (HMM E-Value=2e-07)
Length = 711
Score = 33.5 bits (73), Expect = 0.22
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 270 FDTRTDCSKPSWS-IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNR 446
+D R +KPS + + + R + +D +P + LA+ G D L+IWD R + P+
Sbjct: 2 WDLRNRNNKPSRTMLLSGDRVPLLCVDKHPTQPHLLAAGGQDGVLSIWDMRQEQYPVTLL 61
Query: 447 TDHS 458
HS
Sbjct: 62 EGHS 65
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 33.1 bits (72), Expect = 0.29
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +3
Query: 348 FNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDG 527
F+ + +L S DD + IWDY+N K + H+ + V ++ ++LTGS DG
Sbjct: 92 FHGGEKPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNISCVGFHP-ELPIILTGSEDG 149
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 32.7 bits (71), Expect = 0.38
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 431
N H V+ LDFNP + LAS D+ + IWD + E
Sbjct: 120 NKHSGAVQALDFNPFQPNLLASGASDSEIFIWDMNSPGE 158
>SB_7939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 32.3 bits (70), Expect = 0.50
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +3
Query: 165 MKSDGRTRLKLTAGKWNPHQGHPQFAVLQDMHIKCFDTRTDCSKPSWSIDNAHRQLVRDL 344
+K+D R R + +PHQG+ + D IK +DT T P +I++ H + L
Sbjct: 134 LKNDARYRGHFELCECSPHQGNIIASCSYDFTIKTWDT-TSTLAPLETIEH-HSEFATGL 191
Query: 345 DFN 353
DFN
Sbjct: 192 DFN 194
>SB_8844| Best HMM Match : WD40 (HMM E-Value=2.5e-28)
Length = 539
Score = 31.9 bits (69), Expect = 0.66
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 237 FAVLQDM--HIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
FA++ D H+ F+ ++ + S+ AH+ VR + + Q L SAG D+ L W
Sbjct: 339 FAIIGDSKGHVDSFNIQSGNHRASYGNPRAHKGCVRGVAIDGVNQ-QLLSAGADSQLRFW 397
Query: 411 DYRNGK 428
+ K
Sbjct: 398 SFTKRK 403
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 31.5 bits (68), Expect = 0.88
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 SKPSWSIDN--AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHW 464
+K +W + AH + L P+ + + G+D +N+W I + H+
Sbjct: 5 AKRAWKLQEFVAHGSNINCLSLGPSTGRVMVTGGEDRKVNMWAV-GQPNVIMSLAGHTSP 63
Query: 465 VWTVRYNSYHEQLLLTGSSDG 527
V V++NS E L++ GS G
Sbjct: 64 VECVQFNS-GEDLVVAGSQSG 83
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 31.5 bits (68), Expect = 0.88
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWD-YRNGKEPIFNRTDHSHWVWTVRYNSYH 494
AH V LD+NP LAS D ++ +WD Y NG + + T H V V+++
Sbjct: 202 AHTSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNG-ICVKSHTFHGGAVKDVKWSPGG 260
Query: 495 EQLLLTG 515
QLL G
Sbjct: 261 MQLLSCG 267
>SB_32323| Best HMM Match : WD40 (HMM E-Value=0)
Length = 611
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQ 500
H VR ++F+ + + S GDD + +W+Y+ K +F H ++ T + +HE
Sbjct: 50 HDGPVRGINFHTVQPLFV-SGGDDYKIKVWNYKQ-KRCLFTLLGHLDYIRTTFF--HHEY 105
Query: 501 LLLTGSSD 524
+ SSD
Sbjct: 106 PWILSSSD 113
>SB_49401| Best HMM Match : WD40 (HMM E-Value=1.6e-22)
Length = 453
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
HR+ + + +NP+ + LASAG D + IW + K
Sbjct: 60 HRKTITAIAWNPHNEDILASAGADCRVLIWSIKEQK 95
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 318 AHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFN 443
AH V LD++P + +A+ G D + +WD + P+ N
Sbjct: 419 AHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQGKATPVNN 460
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWD 413
H Q V L ++P+ ++ LAS G+D LNIWD
Sbjct: 290 HTQEVCGLKWSPDGKY-LASGGNDNLLNIWD 319
>SB_39216| Best HMM Match : WD40 (HMM E-Value=1.1e-14)
Length = 867
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/92 (21%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 348 FNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSDG 527
++PN + L SA D + +WD N + + H+ V+++ +++ +Q L T S D
Sbjct: 118 YHPNAENLLTSAAYDLTVKLWDI-NAAKSVITLEGHNEQVFSLAWSADGKQ-LATFSRDK 175
Query: 528 RGLLY----AAASICRDPDDDSEKTGKILEDG 611
+ +Y + P + + G+++ G
Sbjct: 176 KLRIYDPRAQVTPVLEGPGPEGSRGGRVIWGG 207
>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
N H + V DL +NP +ASA +D ++ IW
Sbjct: 83 NGHTRPVLDLGWNPFDDNVIASASEDCSIKIW 114
>SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 306 SIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
++ H + + F P+R + L S G D + WD+ +G+
Sbjct: 132 TLSRVHTNICSTVQFRPHRPWGLVSGGMDYRVAHWDFSSGR 172
>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
Length = 968
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/66 (28%), Positives = 26/66 (39%)
Frame = -1
Query: 212 PLAGSELEPGPTVRFHAAHRSSRAHVVYPHAGLVYDTQAPRVRRMPLSATDLLFGLPCRQ 33
P + P PT R H + + H Y HA +A R+ L A + P
Sbjct: 552 PRLNTPSTPTPTRRVHPSLHAQYTHAEYTHAYTPSTPKATRLVHPHLHAKYIHAYTPSTP 611
Query: 32 TSTRPI 15
T TRP+
Sbjct: 612 TPTRPV 617
>SB_52312| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -1
Query: 722 RDDKPCIVAQGGEGPGLHGAPLXTVHGVFMLLVRLQHAVL 603
RD K C + G EGP L A H +LL +++AVL
Sbjct: 186 RDQKSCAIKAGVEGPVLSLASGQVSHMAGLLLAEVKNAVL 225
>SB_3798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 697 LREAKVQGSTVLHSXQYTESSCCSYDCSTPSS 602
LRE V TVL S QY +S C S +CS+ +S
Sbjct: 106 LRERDVSDRTVLRSDQYNKSHCVS-NCSSCNS 136
>SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)
Length = 375
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 261 IKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGK 428
+ C D RTD P ++I NAH + L + L +A D + +WD ++ K
Sbjct: 218 VYCCDVRTDA--PVFTI-NAHDSAIAGLVLSSQVPNCLVTASADGNMKVWDIKDNK 270
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 348 FNPNRQFH-LASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWTVRYNSYHEQLLLTGSSD 524
FNP R L S DD +L +WD R+ + H V + + S + + + + S+D
Sbjct: 51 FNPERTGDILCSGADDGSLKLWDIRSNSVVMSLVGGHDDRVKSCAW-SPNGEYVASSSAD 109
Query: 525 GRGLLY 542
GR L+
Sbjct: 110 GRVTLW 115
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 294 KPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDHSHWVWT 473
+PS + ++ L F+ +R + S DD L +W +GK + T H+ VW+
Sbjct: 309 RPSKILKGHDDHVITCLQFSGSR---VVSGSDDGTLKVWSALSGK-CLRTLTGHTGGVWS 364
Query: 474 VRYNSYHEQLLLTGSSD 524
+ + + ++++GS+D
Sbjct: 365 SQLSGH---IIVSGSTD 378
>SB_53453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 420 SYSPICSALRHHPRWPGGTGDS 355
S SP+C+ LR HP G GDS
Sbjct: 56 SLSPLCALLRDHPGTRSGIGDS 77
>SB_12443| Best HMM Match : WD40 (HMM E-Value=1e-24)
Length = 515
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR 419
H+ +V + FNP L SA DD L +W R
Sbjct: 476 HQNVVNCVAFNPRDPDMLVSASDDHTLRVWKSR 508
>SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)
Length = 283
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 291 SKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYR-NGKEPIFN-RTDHSHW 464
+KP S++ A L + ++P R + A D L I+D + N P+
Sbjct: 173 AKPLLSLEPAAGYLFA-IRWSPVRPLVFSVATGDGRLLIYDMKVNHINPVTTIDVSDKKP 231
Query: 465 VWTVRYNSYHEQLLLTGSSDG 527
V T+ YN + QL+ TG S+G
Sbjct: 232 VHTLEYNIHRRQLVATGDSEG 252
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 166 MLHTAAPELTSCTLTLDSYTTPKRPASVGC 77
++HT P +SC T DS K+ +S GC
Sbjct: 990 VVHTRQPRCSSCKETFDSKENLKQHSSAGC 1019
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 166 MLHTAAPELTSCTLTLDSYTTPKRPASVGC 77
++HT P SC T DS K+ +S GC
Sbjct: 1107 VVHTRQPRCPSCKETFDSKENLKQHSSAGC 1136
>SB_15788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 28.7 bits (61), Expect = 6.2
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Frame = +3
Query: 351 NPNRQFHLASAGDDAALNIWDYRNGKEPIFNRTDH--SHW-VWTVRYNSYHEQL------ 503
N NR F + D ++ I NGK +F TD+ + W VWT N + QL
Sbjct: 442 NNNRVFTPTKSHDAYSVLINGVFNGKRDMFIGTDNLLASWRVWTPLINQLNSQLPKLYDR 501
Query: 504 ----LLTGSSDGRGLLYAAASICRDPDDDSEKT--GKILEDGVLQ 620
+L + GRG+ + ++ +D D K GK L G L+
Sbjct: 502 DHLGVLNFTLKGRGISFTQNTLEQDYKIDENKAFLGKPLVSGPLE 546
>SB_52616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1855
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 309 IDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIW 410
I H + D +NPN + L S +D + +W
Sbjct: 897 IHGGHTAKISDFSWNPNEPWVLCSVSEDNIMQVW 930
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 416
H Q V L ++P+ + LAS G+D +NIW Y
Sbjct: 470 HSQEVCGLKWSPDGKL-LASGGNDNVVNIWPY 500
>SB_36665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1277
Score = 28.7 bits (61), Expect = 6.2
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = -2
Query: 730 GTREMTSLAS*LREAKVQGSTVLHSXQYTESSCCSYDC-STPSSKIFPVFSLSSSGSRQM 554
G R + L+S ++ + +GS ++ + + S C ++C + + S S S S+Q
Sbjct: 1182 GRRGLLILSSSQKKPRFEGSNLVACRRISASFCGIFECLEQTNPTMVRTMSTSRSLSKQT 1241
Query: 553 LAAAYNKPRPSELPVNSNCSW*LLYLTVHTQ 461
L A N P P+ S W T+H +
Sbjct: 1242 LPKAMNARDP---PLLSQTKW----FTIHAE 1265
>SB_30771| Best HMM Match : WD40 (HMM E-Value=2e-06)
Length = 229
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 315 NAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKE 431
N +RDL FN N+ HLA+ A ++IWD + K+
Sbjct: 71 NLSTNRIRDLAFN-NKTGHLAALSPLAFIHIWDMISEKQ 108
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 129 VHDVSSGAAVCSMKSDGRTRLKLTAGKWNPHQGHPQFAV 245
V DV S A C M SD R+R+K+ K+ HP +V
Sbjct: 743 VRDVYSDAC-CRMTSDDRSRMKVLLQKYGITPDHPLSSV 780
>SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)
Length = 316
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 348 FNPNRQFHLASAGDDAALNIWDYRNGKEPI 437
FNP ++HL+ D ++ +D R+ +PI
Sbjct: 110 FNPESRYHLSFGSADHCVHYYDLRHAAKPI 139
>SB_44731| Best HMM Match : WD40 (HMM E-Value=1.1e-11)
Length = 256
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 321 HRQLVRDLDFNPNRQFHLASAGDDAALNIWDY 416
H + + F+P+ LAS G D A+ +WD+
Sbjct: 180 HTDTIHTMSFSPDGTL-LASGGMDGAVRVWDF 210
>SB_10798| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 630 QHEDSVYCXEWSTVEPWTFASLSYDARLVISRVPR 734
Q++D V C +W + + A + R ++ R+PR
Sbjct: 507 QYKDGVRCSQWYHIRAFVLAYTNIALRRMLRRIPR 541
>SB_43403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 348 FNPNRQFHLASAGDDAALNIWDYRNGK 428
F+PN ++ LA+ D+ L +WDY GK
Sbjct: 130 FSPNGKYILAATLDNT-LKLWDYSKGK 155
>SB_31530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 476 YRPHPVRVISSVEYRLFPVPIVPYVQRC 393
Y PHP RV+ + E+ F P++ Y RC
Sbjct: 351 YYPHPYRVVMAPEHLRFARPVLAY-PRC 377
>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 258 HIKCFDTRTDCSKPSWSIDNAHRQLVRDLDFNPNRQFHLASAGDDAALNIWDYRNGKEPI 437
HI+ +D + P S D + V + F+ + ++ + + G+D++ IWD R K+
Sbjct: 61 HIRLYDINSANPNPVVSYDGVSKN-VTAVGFHEDGKW-MFTGGEDSSARIWDLR--KQID 116
Query: 438 FNRT 449
F+RT
Sbjct: 117 FSRT 120
>SB_18836| Best HMM Match : C1_1 (HMM E-Value=7.3e-17)
Length = 1440
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 221 SRSPSVCCSARHAHKMLRHAH*LLETI 301
S S C ++RH H LRH H L +
Sbjct: 802 STSRDFCSASRHVHSTLRHVHSTLRDV 828
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,492,225
Number of Sequences: 59808
Number of extensions: 660359
Number of successful extensions: 2301
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2296
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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