Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N01
(865 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomy... 97 4e-21
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 33 0.040
SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 28 1.5
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 27 2.6
SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.5
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 27 4.5
SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr... 26 7.9
>SPAC3H1.09c |||vacuolar amino acid transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 656
Score = 96.7 bits (230), Expect = 4e-21
Identities = 76/274 (27%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLV------KRFNVEITVFQVMLCILLPLILINWVRDLKYLA 169
QIG Y+ FV+ + + + +++ + +F + + +PL L VR + L+
Sbjct: 361 QIGFSSAYISFVASTLQACVKVISTTHREYHLAVFIF-IQFLVFVPLSL---VRKISKLS 416
Query: 170 PFSAVANVVTIVGFGIILYYIFRETPTL--EGKEPVGRL--ADFPLFFGTVLFALEAIGV 337
+ +A+V ++G ILY F + TL +G V DF LF G +F E I +
Sbjct: 417 ATALIADVFILLG---ILYLYFWDVITLATKGIADVAMFNKTDFSLFIGVAIFTYEGICL 473
Query: 338 ILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETE 517
ILP++ +M PK+ +L M +I +L++ +GL Y +G + + LN+P T
Sbjct: 474 ILPIQEQMAKPKNLP---KLLTGVMAAISLLFISIGLLSYAAFGSKVKTVVILNMPESTF 530
Query: 518 TLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVW--EYIVRTIIVLI 691
T+ ++Q L A AI ++ L + AI I+ + I R ++ W Y+ I++L
Sbjct: 531 TV--IIQFLYAIAILLSTPLQLFPAIAII-EQGIFTRSGKRNRKIKWRKNYLRVLIVILA 587
Query: 692 TFGLXAAVPELDLFISLFGALCLSALGLXFPAFI 793
A LDLF+S+ G++C L +P +
Sbjct: 588 ILISWAGSSRLDLFVSMVGSVCCIPLIYMYPPML 621
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 33.5 bits (73), Expect = 0.040
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Frame = +2
Query: 110 LCILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKEPV-----G 274
L +L PL + + L++ + S +A + F ++ ++I +T E + V G
Sbjct: 147 LFVLTPLSFLKRLDSLRHTSVISLIALCYLV--FIVLYHFIIGDTVKGEIRYFVPESGFG 204
Query: 275 RLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFG 454
L+ P+F A VI NE++ F + A+IS +LY+ + + G
Sbjct: 205 YLSVLPVFVFGFTCHQNAFSVI----NEVRNFSQGFVNFTMFT-AIISSTLLYLLVAITG 259
Query: 455 YLRYGEESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLL 634
YL +G + G+I + + + ++ +F ++ L C+ + + Y +R
Sbjct: 260 YLSFGSLASGNIIAMYDNTSIWIIGGKLAIVVLVLF-SYPLQCHPCRN---SVYQAIRRS 315
Query: 635 NSKFRVVWEY--IVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTY 808
S + Y ++ I+L T L + L++ ++ G + G F +FI +
Sbjct: 316 YSAHDMSDGYHAVITLCILLFTHSLALLLSSLEMVLAFVG-----STGSTFISFILPGSL 370
Query: 809 WYYVS 823
+Y+ S
Sbjct: 371 YYFFS 375
>SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 757
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 103 SDVVYPATIDTDQLGTRP--EISRSVLCCSQCGDYSWIRYHLVLHIQRNTDFRR 258
S + P+ D L +RP E++ +LCC G R V ++ ++FR+
Sbjct: 326 STIDLPSATDASHLMSRPDREVNHLILCCHGIGQKMGERVETVSFVKDISNFRK 379
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.5 bits (58), Expect = 2.6
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 676 YHRTDHFRLXCGGSGI 723
YH HFR C GSGI
Sbjct: 1441 YHNNGHFRRMCDGSGI 1456
>SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 371 KSFVGKFGVLNRAM----ISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQ 538
K + GK +L R M I+++IL + +G F Y+ + + + S T A +
Sbjct: 86 KYWKGKPPLLKRRMEFIWITLLILALAVGGFAYIDVDRNLVQGAAMKIFSFTFQTALPIS 145
Query: 539 CLLAFAIFITHGLACY 586
+ + + T+G A Y
Sbjct: 146 IAIIWHVISTYGFALY 161
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 77 FNVEITVFQVMLCILLPLILINWVRDLK--YLAPFSAVANVVTIVGFGIILYYIFR 238
F+ IT+ ++L L +LI W R+L + PF N +I+ F I+L I R
Sbjct: 1003 FSCTITILMLLLAPLDFPVLIVWARNLSMHWSIPFPTHHNFFSIIPF-ILLTEILR 1057
>SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 514
Score = 25.8 bits (54), Expect = 7.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 375 DFGVFISFSNGRITPMASRANRTV 304
D VFI F NGR++P+ TV
Sbjct: 170 DVSVFILFPNGRVSPIQEAQMTTV 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,789,971
Number of Sequences: 5004
Number of extensions: 84121
Number of successful extensions: 278
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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