Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N01
(865 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08) 119 4e-27
SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05) 93 3e-19
SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 2e-15
SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 2e-15
SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31) 69 4e-12
SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07) 42 6e-04
SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40) 36 0.032
SB_31832| Best HMM Match : FtsX (HMM E-Value=2.8) 34 0.13
SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19) 31 1.2
SB_10385| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88) 29 4.9
SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0) 29 4.9
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 29 6.5
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_23867| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_19767| Best HMM Match : ADK (HMM E-Value=0.26) 28 8.5
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 28 8.5
>SB_43965| Best HMM Match : Aa_trans (HMM E-Value=7.5e-08)
Length = 373
Score = 119 bits (286), Expect = 4e-27
Identities = 73/198 (36%), Positives = 113/198 (57%)
Frame = +2
Query: 14 GTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFSAVANV 193
G C +Y +FV+E++ + ++ V +L IL+P+IL++++R LK LA S+V+NV
Sbjct: 104 GFCAIYFLFVAESLQQAFDAYTSFKLDVKLWVLIILVPVILLSFIRTLKILAVLSSVSNV 163
Query: 194 VTIVGFGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKTPK 373
+ + G +L Y T P+ + PL FG V+F E IGVILP+EN M P+
Sbjct: 164 LALFGTVCVLSYA-GSTVHDPSTLPLTQWKTLPLAFGAVVFTYEGIGVILPVENMMAIPR 222
Query: 374 SFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQCLLAF 553
F VL M + +LY+ MG+ GYL G GSITLNLP+ ++ V+ ++A
Sbjct: 223 RF---RWVLYAGMSLVTLLYLLMGVLGYLSCGTSCQGSITLNLPNTPFYMS--VKLIIAA 277
Query: 554 AIFITHGLACYVAIDILW 607
+IF+T+ + YV IL+
Sbjct: 278 SIFLTYFIQFYVITSILF 295
>SB_43964| Best HMM Match : Aa_trans (HMM E-Value=9.2e-05)
Length = 332
Score = 93.1 bits (221), Expect = 3e-19
Identities = 57/163 (34%), Positives = 93/163 (57%)
Frame = +2
Query: 299 FGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEES 478
+G L A ++LP+EN M+TP+ F VLN AM ++ILY+ +G GY+
Sbjct: 122 YGMPLAVAYAGLLVLPVENMMRTPRDFTW---VLNLAMSVVVILYLVVGTMGYISCAAMC 178
Query: 479 MGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVW 658
GS TLNLP + ++ L+A ++F+T+ L YV ++IL + + ++ K++ V
Sbjct: 179 KGSFTLNLPDTP--FYTTLKLLIAGSMFLTYFLQFYVPVEILLPSVL--KRVSKKYQTVA 234
Query: 659 EYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPA 787
+ RT +VL+T L A VP L+ I++ G+L + L + FPA
Sbjct: 235 DLGFRTSLVLVTVVLAACVPRLEDVIAVIGSLASTTLCMTFPA 277
>SB_42790| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 80.6 bits (190), Expect = 2e-15
Identities = 60/235 (25%), Positives = 118/235 (50%), Gaps = 6/235 (2%)
Frame = +2
Query: 98 FQVMLCILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKE-PVG 274
+ + +L+PL+LI+ + L +L+ AV +++T + II+ Y +E + + P
Sbjct: 278 YLICAALLVPLVLIHQLTVLAWLSML-AVLSLITCLF--IIIGYSLQEWQSWKIHNIPDF 334
Query: 275 RLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFG 454
+ +FP+ G ++F+ V +E+ M+ P+ F + + S+ + V +GL
Sbjct: 335 DINNFPVAIGIIVFSYCGHSVFPGIESSMRKPRKFKK---IACTSFTSVTLCKVAIGLLC 391
Query: 455 YLRYGEESMGSITLNLPSETETLA--SVVQCLLAFAIFITHGLACYVA---IDILWNEYI 619
L YG ++ ITLN+ SE + + S + + + + L +VA +D++ +
Sbjct: 392 CLLYGPHTLPLITLNIQSEAKNVVMRSFMAVFIIVNTYFSFPLNIFVASETLDLIALPKL 451
Query: 620 GVRLLNSKFRVVWEYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFP 784
+N R +W+ + RT +VL T G+ A+P L L +S+FG+L + + P
Sbjct: 452 PSCSVNKLKRAIWKLLTRTTLVLSTCGIAVAIPHLGLLMSIFGSLLGACISFILP 506
>SB_15337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 80.6 bits (190), Expect = 2e-15
Identities = 43/120 (35%), Positives = 69/120 (57%)
Frame = +2
Query: 107 MLCILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKEPVGRLAD 286
++ +L+P+IL++++ L+ L+ S +AN+ ++G I Y+ R + A
Sbjct: 118 IVILLVPVILLSYIHSLRVLSVLSTMANICCLIGLVITFQYLGRNVHNPKLLPEFDGWAA 177
Query: 287 FPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRY 466
PLFFG V+F E IGV+LPLEN+M P+ F VLN M I+ ++ MG+ GYL +
Sbjct: 178 LPLFFGMVVFTFEGIGVVLPLENQMARPQHF---RLVLNVGMGIILAIFYLMGVLGYLAF 234
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = +2
Query: 632 LNSKFRVVWEYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTYW 811
+ +F + +Y RT++V +T L +P+L FISL G++ SAL L FP I T
Sbjct: 249 VGERFHGIADYGFRTLLVCVTCALALGIPQLSNFISLVGSIGSSALALVFPITIHLLT-- 306
Query: 812 YYVSRSERIRMIIXNIIV 865
Y + I +II ++ +
Sbjct: 307 LYSTHQLTISVIIKDVFI 324
>SB_1563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 79.4 bits (187), Expect = 3e-15
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
Frame = +2
Query: 80 NVEITVFQVMLCI-LLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLE 256
N + F ++L I ++PLIL+ ++R ++ L P S ++N+ + F +L Y+
Sbjct: 514 NSSVPSFPLLLLIPVVPLILMAFIRRVRKLGPVSFISNLALLFAFLAVLGYMLTGWTFKL 573
Query: 257 GKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYV 436
+ + + FP+FFG V A + IG ++P+E+ M + + L ++S I+
Sbjct: 574 NEIRLFSWSTFPVFFGQVTSAYQGIGTLIPIESSMAENRHRYPLYLHLALGLLSAIL--G 631
Query: 437 GMGLFGYLRYGEESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDIL 604
G G+ GYL YGE +T LP L +VVQ LL AI T+ L + +I+
Sbjct: 632 GFGITGYLVYGENVDQIVTSELPQ--GLLVTVVQILLCLAILFTYPLQLFPVTEII 685
>SB_31490| Best HMM Match : Aa_trans (HMM E-Value=4.9e-31)
Length = 974
Score = 69.3 bits (162), Expect = 4e-12
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 1/170 (0%)
Frame = +2
Query: 95 VFQVMLCILLPLIL-INWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKEPV 271
+F ++L I LP ++ + ++R ++ L P S +AN+ + GF +L I +
Sbjct: 575 MFPLLLLIPLPFVVAMAFIRKIRKLGPISGLANIALLAGFFGLLVQILDGLHFKLNDVTL 634
Query: 272 GRLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLF 451
FP+FFG + A E IG I+P+E+ M + + + L A +S+++ G+
Sbjct: 635 ANWITFPIFFGQLTCAYEGIGCIIPIESGMGSNRPRFPLYLHLTLAQLSVLL--GSFGVL 692
Query: 452 GYLRYGEESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDI 601
G+L YG + +T L T A +V+ L A+ T+ L + I I
Sbjct: 693 GFLIYGNDVPQIVTDKL--TTGLFAQLVRVTLIIAVLFTYPLQLFPVIQI 740
>SB_42789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 58.8 bits (136), Expect = 5e-09
Identities = 64/277 (23%), Positives = 119/277 (42%), Gaps = 12/277 (4%)
Frame = +2
Query: 26 VYVVFVSENIHFVLVKRFNVEITVFQVMLCI-LLP------LILINWVRDLKYLAPFSAV 184
+Y++ ++ + K ++ + V+ V+ + +LP L LI W+ + LA S++
Sbjct: 203 LYLILLTTMFSQITEKYISLSMNVWAVLCAVAVLPSVFITRLSLIAWMSMIAVLALMSSI 262
Query: 185 ANVVTIVGFGIILY--YIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENE 358
A VT+ + I+ Y + PT +G FP+ FG V F+ A V +E
Sbjct: 263 A--VTLA-YCILNYDRWSINNIPTFDGNT-------FPIGFGIVTFSYCAHAVFPGIEAS 312
Query: 359 MKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQ 538
MK P+++ K +++ + + + G F L +G + +T+NL +++ +
Sbjct: 313 MKHPENY-NK--MMHTSFLVSATVKTLFGAFAVLTFGLVTDQVVTVNL-ADSLAFNTAAT 368
Query: 539 CLLAFAIFITHGLACYVAI---DILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXA 709
+A +F + L +V I D L + S + VW I RT++V +
Sbjct: 369 AFVALNVFFSFPLPLFVVIETFDGLLLPHFPYVGRESNYHWVWLLITRTLLVTFALFISL 428
Query: 710 AVPELDLFISLFGALCLSALGLXFPAFIQSCTYWYYV 820
VP L + G+ + L FP W Y+
Sbjct: 429 IVPHFGLLMGFIGSFTGTCLSFCFPCIAHLKLKWKYL 465
>SB_17613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1004
Score = 56.8 bits (131), Expect = 2e-08
Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 3/235 (1%)
Frame = +2
Query: 116 ILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPL 295
I LPL + V + + + S A + II+Y I + P FP+
Sbjct: 548 IALPLAFVRRVSVIAWASMISVFAFTCALTT--IIIYTITQYHHMSIQNIPAFDFTKFPV 605
Query: 296 FFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEE 475
FG ++F+ A V +E M+ P+ + ++N A + I+ +GL + +G
Sbjct: 606 GFGIIVFSYTAHAVFPGVEASMRNPRMYPQ---MMNVAFVVAAIVKTSLGLLTVMVFGTT 662
Query: 476 SMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGV---RLLNSKF 646
+ ++T+N+ + T + + + + + + +V + L ++++ +S++
Sbjct: 663 TQQAVTVNIKNST-VVNYLSNGFVIINVLFSFPINLFVITETLDSKFLRFFPHMDRSSEY 721
Query: 647 RVVWEYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTYW 811
W+ + RT+++ + L VP LF+ G+ + L P + W
Sbjct: 722 NWAWQGLTRTLVLTLALVLVLIVPHFALFVGFVGSFTGTCLCFVLPCYFNIKLKW 776
>SB_2577| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 703
Score = 52.4 bits (120), Expect = 5e-07
Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 12/234 (5%)
Frame = +2
Query: 125 PLILINWVRDLKYLAPFSAVANVVTIVG----FGIILYYIFRETPTLEGKEPVGRLADFP 292
PL +W L LA S V+ + ++G + LY + P + F
Sbjct: 97 PLSQSDWTA-LASLADVSWVSFLTVLIGEVIYITVFLYSCYHHERWDVASLPPFAIKKFG 155
Query: 293 LFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGE 472
G V+ + + + +E M+ P +F V+N I++ + V G GYL +
Sbjct: 156 AAVGIVVVSYSSQPYMPAIEGSMQRPHNFNN---VMNVTYIAVTFVKVFFGFIGYLTFTR 212
Query: 473 ESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWN--------EYIGVR 628
++ IT NLP L VV L+ F ++ + Y DIL N E+
Sbjct: 213 DTDQVITNNLPE--GVLHMVVNLLVLFLAATSYTIPVYTVFDILENISFPCGRMEHPSSA 270
Query: 629 LLNSKFRVVWEYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPAF 790
K R ++ T + VP L+++L G+ L FPAF
Sbjct: 271 KGKDKLSYFQALTARLCVISFTLLVGVLVPHFGLYMALVGSFTGMCLAFIFPAF 324
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 52.0 bits (119), Expect = 6e-07
Identities = 44/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Frame = +2
Query: 14 GTCCVYVVFVSENIHFVLVKRFN-VEITVFQVMLCIL-LPLILINWVRDLKYLAPFSAVA 187
G +Y+V ++ I + ++K F ++I ++ V ++ LPLI I V + +++ S A
Sbjct: 207 GGIVMYIVLLA-TIFYDMLKDFAPLDIYMWAVACAVVALPLIFITRVSVIAWISMMSVFA 265
Query: 188 NVVTIVGFGIILYYIFRETPTLEGKE-PVGRLADFPLFFGTVLFALEAIGVILPLENEMK 364
+ G I+ Y F E + + PV + FP+ FG ++F+ A V +E M+
Sbjct: 266 ---LLSGLLAIIIYCFTEFDRMSLRNIPVFEPSTFPIGFGIIVFSYCAHAVFPGVEGSMQ 322
Query: 365 TPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETE 517
P+ F ++N + V +GL LR+G+++ +T+N+ S+ +
Sbjct: 323 DPQKFPL---MMNTSFTLAAFNKVLLGLLAVLRFGDQTEQVVTVNMGSKEQ 370
>SB_36054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1267
Score = 45.2 bits (102), Expect = 7e-05
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 4/228 (1%)
Frame = +2
Query: 116 ILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPL 295
+ LP + I R L +L S + ++ F ++ Y FRE + + + + DF
Sbjct: 1004 VALPSLFIKTFRSLVWL---SLLGTASLLLAFITVIVYEFREYKSWDFRALL--FWDFNG 1058
Query: 296 FFGTVLFALEAIGV---ILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRY 466
F ++ AL + G+ +L +E MK KS + + ++ SII + G+L +
Sbjct: 1059 FLFSLNIALFSNGIHCAVLSIEKSMKH-KSQICQLLAISYTSTSIIKTL--FAVLGFLAF 1115
Query: 467 GEESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKF 646
+ + LN+P T + +VV + + L ++ I I+ ++ IG + S+
Sbjct: 1116 KANTSEVVILNIPQGT--MRTVVIITTVISTLSGYSLLSHLLISIIESKKIG-EFIGSRL 1172
Query: 647 RVVWEYIVRTIIVLITFGLXA-AVPELDLFISLFGALCLSALGLXFPA 787
+I+ V+I L A +P L+ISL + L FPA
Sbjct: 1173 SSFAFFIISRFAVVIISSLTAICIPHFALWISLSACIGGYVTCLFFPA 1220
>SB_36678| Best HMM Match : Aa_trans (HMM E-Value=1.8e-07)
Length = 956
Score = 41.9 bits (94), Expect = 6e-04
Identities = 38/152 (25%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Frame = +2
Query: 341 LPLENEMKTPKSFVGKFGVL-NRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSE-- 511
L + E+K P V +FG++ AM+ Y FG+L +G + I +N S
Sbjct: 481 LSVYTELKRPT--VPRFGIVCTIAMVLCCTAYSVTACFGFLTFGAKCKSDILMNYSSNDV 538
Query: 512 TETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTII-VL 688
+A V L+ + F + + A++ LW + L ++ +V+T++ V
Sbjct: 539 MVNIARVAIALVVISTFASVHFSGRSAVEGLWLTAWRMTLYEAEINARKRRVVQTVLWVG 598
Query: 689 ITFGLXAAVPELDLFISLFGALCLSALGLXFP 784
T + AV ++ IS+ G L + L FP
Sbjct: 599 FTLFIAVAVSDISYVISIIGGLAALFI-LFFP 629
>SB_32782| Best HMM Match : Aa_trans (HMM E-Value=1.7e-40)
Length = 440
Score = 36.3 bits (80), Expect = 0.032
Identities = 42/230 (18%), Positives = 95/230 (41%), Gaps = 3/230 (1%)
Frame = +2
Query: 104 VMLCILLPLILINWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRETP---TLEGKEPVG 274
+M C +P L + + +L+ S A ++++V +++Y ++ + T P
Sbjct: 167 IMACTGVPSSLFRSLAQVAWLSLLSIFALILSVVL--VVVYSVYNHSTWVITTSNILPQV 224
Query: 275 RLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFG 454
+ P+ V+F+ A + LE + ++ G L+ ++ I L F
Sbjct: 225 NIESVPIALAIVVFSYSAHASLPGLEASLSNRTNYNAILG-LSYSLSCFIKLVFTFAAF- 282
Query: 455 YLRYGEESMGSITLNLPSETETLASVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLL 634
L + + IT ++P +A V L+ ++F ++ + I+ N I +
Sbjct: 283 -LTFHPNILPVITTSMPMSHIYIA-VTAFLILNSLF-SYPYRIMAMVHIVENSLIPESIR 339
Query: 635 NSKFRVVWEYIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFP 784
+ +VW +VR ++ +T +P L ++ G++ + +P
Sbjct: 340 SRVPDLVWYTVVRLVLNFLTLIPAVLIPHFALLMAFMGSVISILTAIIYP 389
>SB_31832| Best HMM Match : FtsX (HMM E-Value=2.8)
Length = 186
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +2
Query: 662 YIVRTIIVLITFGLXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTYWYYVSRSERIR 841
Y++R + V++T + VPE L +++ G++ L L FP + ++S + +
Sbjct: 95 YLLRAVFVVLTVAIAVFVPEFSLLMAIIGSISGVFLTLVFPPLFYIILHLEHISSKQYVV 154
Query: 842 MII 850
I+
Sbjct: 155 NIL 157
>SB_56997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = -2
Query: 396 TPNLPTNDFGVFISFSNGRITPMASRANRTVPKNRGKSASRPTGSLP 256
TP +PT V +S G +TP + NRTVP + + PTGS P
Sbjct: 554 TPGIPTGTLPVTLS---GTMTP-GTTTNRTVPLSGSLTPGTPTGSRP 596
>SB_27467| Best HMM Match : ANF_receptor (HMM E-Value=6.9e-19)
Length = 922
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/74 (21%), Positives = 34/74 (45%)
Frame = +2
Query: 5 YQIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFSAV 184
+ + CC Y F + + + + ++ +LC + L N V+ +LA FSA
Sbjct: 681 FALSLCCAYYAFKARKLPANFSEARFIAFAMYMQLLCNICYATLQNSVKG-NFLATFSAA 739
Query: 185 ANVVTIVGFGIILY 226
+++ GF + ++
Sbjct: 740 IIILSAYGFLVCMF 753
>SB_10385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Frame = +2
Query: 137 INWVRDLKYLAPFSAVANVVTIVGFGIILYYIFRE--TPTLEGKEPVGRLADFPLFFGTV 310
I W L+Y+ +A A ++ F ++ Y R + G VG L +P F G
Sbjct: 110 IGWNLILEYMIGTAADARALSGC-FDFVIGYALRNFTLDNIGGFHTVG-LGTYPDFLG-- 165
Query: 311 LFALEAIGVILPLENEMKTPKSFVGKFGVLNRAMISIII 427
FA+ + V + L +K +F G F VLN +++ II
Sbjct: 166 -FAVTVV-VTIVLAIGVKQSSTFTGIFNVLNILVVTFII 202
>SB_48885| Best HMM Match : DUF741 (HMM E-Value=0.88)
Length = 841
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Frame = -1
Query: 595 NGDVASQSVSYEDCE------CKETLYDTCKSFCF 509
N DV Q V Y+ C+ CKE YD CK +
Sbjct: 118 NSDVEIQEVKYDCCKEVKYDCCKEVKYDCCKDLTY 152
>SB_47441| Best HMM Match : NOT2_3_5 (HMM E-Value=0)
Length = 584
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/87 (24%), Positives = 31/87 (35%)
Frame = -2
Query: 393 PNLPTNDFGVFISFSNGRITPMASRANRTVPKNRGKSASRPTGSLPSKVGVSLNM*YKMI 214
PN PT + I +P + N + P + V SL
Sbjct: 58 PNSPTETVPMVIPTKIPNSSPRKNSKEAKTSSNSLSGTTPPRSTPKMNVPTSLQALASSA 117
Query: 213 PNPTIVTTLATAENGARYFRSRTQLIS 133
NP IV + +T ARY S + L++
Sbjct: 118 ANPVIVKSSSTISKPARYLFSSSGLVN 144
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 399 KTPNLPTN-DFGVFISFSNGRITPMASRANRTVPKNRGKSASRPTGSLPSKVGVSLNM*Y 223
+T L TN + G+F + TP + A + P + S S P PS+ S Y
Sbjct: 792 QTAPLVTNKEQGIFGGLFSSSQTPQGTSA-QPKPSQQPNSTSEPRPQQPSQPKSSAQASY 850
Query: 222 KMIPNPTI 199
K P PT+
Sbjct: 851 KEPPKPTL 858
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 223 QDDTESNYSHHIGYSRERSEIFQVSYPIDQY-QW*QDTQHHLEDGDFHVEPLHQDEMDV 50
+++T NY G + ER E Q D+Y +W QD L+ + + L+ +E D+
Sbjct: 412 EEETSFNYHKKKGIAAERREAKQEKEEADKYNKWNQDLVDSLQ--ELQLFKLYHNEQDI 468
>SB_23867| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 329 WLPERIERCRRTGGSQRADQQVLCLLKSVFL 237
WL +I+R R G S +A V C+L + FL
Sbjct: 320 WLASQIKRDRPQGSSFQASSMVNCMLHTEFL 350
>SB_19767| Best HMM Match : ADK (HMM E-Value=0.26)
Length = 336
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 329 WLPERIERCRRTGGSQRADQQVLCLLKSVFL 237
WL +I+R R G S +A V C+L + FL
Sbjct: 197 WLASQIKRDRPQGSSFQASSMVNCMLHTEFL 227
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 646 PCRMGIYCEDYHRTDHFRLXCGGSGIGSVHFPVRCSVSVCSRAXIPCLH 792
PC G C DY T++F C G G RC +++ A PCLH
Sbjct: 679 PCVNGGLCVDY--TNYFECLCH-PGYGGD----RCEINIDDCANKPCLH 720
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,163,378
Number of Sequences: 59808
Number of extensions: 673407
Number of successful extensions: 2023
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2003
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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