Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_N01
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical ... 169 2e-42
AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical ... 165 5e-41
Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical pr... 118 4e-27
U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical... 106 2e-23
Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical pr... 105 5e-23
AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical... 59 3e-09
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 59 3e-09
U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical pr... 55 8e-08
Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical p... 52 7e-07
AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein. 52 7e-07
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 50 3e-06
U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 44 1e-04
U39744-1|AAK18882.1| 471|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z83319-5|CAB05907.2| 446|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched relat... 30 2.4
AF016451-6|AAB66000.2| 379|Caenorhabditis elegans Serpentine re... 30 2.4
Z83233-4|CAB05758.1| 298|Caenorhabditis elegans Hypothetical pr... 29 4.3
AC006814-3|AAF60861.1| 382|Caenorhabditis elegans Hypothetical ... 29 4.3
Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81124-4|CAB03372.1| 341|Caenorhabditis elegans Hypothetical pr... 28 9.9
AF537097-1|AAN60468.1| 110|Caenorhabditis elegans PHF-5 protein. 28 9.9
AF537096-1|AAN60467.1| 110|Caenorhabditis elegans PHF-5 protein. 28 9.9
AC026301-14|AAP13738.1| 110|Caenorhabditis elegans Phd finger f... 28 9.9
>AF025468-4|AAB71045.1| 449|Caenorhabditis elegans Hypothetical
protein T27A1.5 protein.
Length = 449
Score = 169 bits (412), Expect = 2e-42
Identities = 91/268 (33%), Positives = 157/268 (58%), Gaps = 1/268 (0%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFSAVA 187
Q G CCVY VF+++N+ + ++ I+ + +L+P+ + +R+LK LAP +AVA
Sbjct: 142 QFGFCCVYFVFMADNLKQFFDQTSSIHISQAGWIALLLIPISALCTIRELKALAPLAAVA 201
Query: 188 NVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKT 367
N V I+ I+L +F + L+ G + + PLFFGTV+FA E + V+LP+EN+M
Sbjct: 202 NFVYIIAVVIVLADLFSDWQPLDSLPAFGAVENLPLFFGTVMFAFEGVAVVLPIENQMNE 261
Query: 368 PKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQCLL 547
P F+ GVLN + I ++++Y+ +G FG+LRYG + ++TLNLP ++ +
Sbjct: 262 PIHFITPNGVLNTSCILVLLVYMTVGFFGFLRYGNDIKDTLTLNLPQ--TPFYQAIKVMF 319
Query: 548 AFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXAAVPELD 727
I +++ L YV ++ + ++I +++ +K + Y +R VL+T + +P L
Sbjct: 320 VLCILVSYPLQFYVPMERV-EKWIKRKVVEAK-QEPMIYAIRFGGVLLTCAMAQLIPHLA 377
Query: 728 LFISLFGALCLSALGLXFPAFIQ-SCTY 808
LFISL G++ ++L L FP I+ C+Y
Sbjct: 378 LFISLVGSVAGTSLTLVFPPLIELLCSY 405
>AL021481-5|CAA16336.2| 455|Caenorhabditis elegans Hypothetical
protein Y43F4B.7 protein.
Length = 455
Score = 165 bits (400), Expect = 5e-41
Identities = 90/286 (31%), Positives = 156/286 (54%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFSAVA 187
Q+G CCVY VF+++N+ ++ ++ ML +L+P++ I +R L LAPF+ A
Sbjct: 152 QLGFCCVYFVFMADNLEDFFNNNTSIHLSKAVWMLLLLIPMLSICSIRRLSILAPFAMAA 211
Query: 188 NVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKT 367
NVV +V ++L++ + + G+ D PLFFGTV+FA E + VI+P+EN M++
Sbjct: 212 NVVYVVAVAVVLFFFLSDLRPISSLPWFGKATDLPLFFGTVMFAFEGVAVIMPIENRMQS 271
Query: 368 PKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQCLL 547
P +F+ GVLN + + ++ ++ G +GYL G + + TLNLP ++ +
Sbjct: 272 PHAFISWNGVLNSSCLVVLAIFSVTGFYGYLSLGNDVKDTATLNLP--MTPFYQTIKLMF 329
Query: 548 AFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXAAVPELD 727
I I++ L YV ++ + ++I ++ K + ++ YI R V++T + +P L
Sbjct: 330 VACIMISYPLQFYVPMERI-EKWITRKIPVDK-QTLYIYIARYSGVILTCAIAELIPHLA 387
Query: 728 LFISLFGALCLSALGLXFPAFIQSCTYWYYVSRSERIRMIIXNIIV 865
LFISL GA +++ L FP I+ T Y + I NI++
Sbjct: 388 LFISLIGAFSGASMALLFPPCIELLT--SYAKNELSTGLWIKNIVL 431
>Z11505-1|CAA77582.1| 460|Caenorhabditis elegans Hypothetical protein
F59B2.2 protein.
Length = 460
Score = 118 bits (285), Expect = 4e-27
Identities = 78/299 (26%), Positives = 147/299 (49%), Gaps = 12/299 (4%)
Frame = +2
Query: 5 YQIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCI----LLPLILINWVRDLKYLAP 172
YQ+G C V ++F+S+N+ V + ++ T Q M+ + L ++L N +++ ++
Sbjct: 140 YQLGMCSVAILFISDNL--VNLVGDHLGGTRHQQMILMATVSLFFILLTNMFTEMRIVSF 197
Query: 173 FSAVANVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLE 352
F+ V++V ++G +I+ Y ++ + G ++A E +ILP+E
Sbjct: 198 FALVSSVFFVIGAAVIMQYTVQQPNQWDKLPAATNFTGTITMIGMSMYAFEGQTMILPIE 257
Query: 353 NEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASV 532
N++ P +F+ FGVL+ MI +G FGY +G+ +IT N+P E L S
Sbjct: 258 NKLDNPAAFLAPFGVLSTTMIICTAFMTALGFFGYTGFGDSIAPTITTNVPK--EGLYST 315
Query: 533 VQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYI----VRTIIVLITFG 700
V L + + +A YV D+ +N + R ++F V +++ R VL+T+
Sbjct: 316 VNVFLMLQSLLGNSIAMYVVYDMFFNGF--RRKFGARFPNVPKWLSDKGFRVFWVLVTYL 373
Query: 701 LXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTYWY----YVSRSERIRMIIXNIIV 865
+ +P+L++ I L G + L FP F + T+W ++ +R+ I N++V
Sbjct: 374 MAVLIPKLEIMIPLVGVTSGALCALIFPPFFEMITFWTDWKGLLTYRQRMTKIFINLVV 432
>U28928-5|AAQ01535.1| 434|Caenorhabditis elegans Hypothetical
protein C44B7.6b protein.
Length = 434
Score = 116 bits (280), Expect = 2e-26
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLP-LILINWVRDLKYLAPFSAV 184
Q+G CC + +FV ++H +L N ++ + ++LP IL+ + ++ L+ S
Sbjct: 124 QLGICCCFYIFVVYHLHELLEFVMN-DVPSRATLFPMVLPAFILLVSLSSMRALSLVSLG 182
Query: 185 ANVVTIVGFGIILYYIFR-ETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEM 361
N + ++ +I++ + E L PV L GT+L+ALE ++LPLEN M
Sbjct: 183 GNFLMLIALAVIMFQLLTTEHKKLADLPPVTDLMGIVSAAGTILYALEGQAMVLPLENRM 242
Query: 362 KTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQC 541
K P+ G FGVL+ + ++++Y G FG+L YG + SITLNLP+ + L V+
Sbjct: 243 KKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQDSITLNLPN--DHLGIFVKA 300
Query: 542 LLAFAIFITHGLACYVAIDILWNEYIGVRL-----LNSKFRVVWEYIVRTIIVLITFGLX 706
+L F ++ + + + ++W I +L +++ + + + R IV++ F L
Sbjct: 301 VLLFVVYSGFLIQVFPIVAMIW-PAIKKKLRTTCGVSTTTKRIVHFAFRYSIVIVVFLLS 359
Query: 707 AAVPELDLFISLFGALCLSALGLXFPA 787
A+P L + L G L L FP+
Sbjct: 360 YAIPRLSDMVPLVGVTAGMLLALVFPS 386
>U28928-4|AAA68337.2| 489|Caenorhabditis elegans Hypothetical
protein C44B7.6a protein.
Length = 489
Score = 116 bits (280), Expect = 2e-26
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLP-LILINWVRDLKYLAPFSAV 184
Q+G CC + +FV ++H +L N ++ + ++LP IL+ + ++ L+ S
Sbjct: 179 QLGICCCFYIFVVYHLHELLEFVMN-DVPSRATLFPMVLPAFILLVSLSSMRALSLVSLG 237
Query: 185 ANVVTIVGFGIILYYIFR-ETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEM 361
N + ++ +I++ + E L PV L GT+L+ALE ++LPLEN M
Sbjct: 238 GNFLMLIALAVIMFQLLTTEHKKLADLPPVTDLMGIVSAAGTILYALEGQAMVLPLENRM 297
Query: 362 KTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQC 541
K P+ G FGVL+ + ++++Y G FG+L YG + SITLNLP+ + L V+
Sbjct: 298 KKPEDMKGPFGVLSVGVGMVVVIYSFAGFFGFLTYGNDVQDSITLNLPN--DHLGIFVKA 355
Query: 542 LLAFAIFITHGLACYVAIDILWNEYIGVRL-----LNSKFRVVWEYIVRTIIVLITFGLX 706
+L F ++ + + + ++W I +L +++ + + + R IV++ F L
Sbjct: 356 VLLFVVYSGFLIQVFPIVAMIW-PAIKKKLRTTCGVSTTTKRIVHFAFRYSIVIVVFLLS 414
Query: 707 AAVPELDLFISLFGALCLSALGLXFPA 787
A+P L + L G L L FP+
Sbjct: 415 YAIPRLSDMVPLVGVTAGMLLALVFPS 441
>AL031630-22|CAA20995.2| 454|Caenorhabditis elegans Hypothetical
protein Y38H6C.17 protein.
Length = 454
Score = 106 bits (254), Expect = 2e-23
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 5/273 (1%)
Frame = +2
Query: 5 YQIGTCCVYVVFVSENIHFV--LVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFS 178
+Q+G V ++F E+I + + + ++L +P +L N + ++ + S
Sbjct: 137 FQLGVITVSMIFAVEHIIEIWQFIAGSPPPFSKIVLILMYFVPQMLFNLIGHIRIITFLS 196
Query: 179 AVANVVTIVGFGIILYYIFRET--PTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLE 352
NV+ +I + T PT E G + L G+++++ E ++LPLE
Sbjct: 197 LCGNVIIFAAIALITQELLSHTWYPTWELPSITG-VEGVSLAAGSLIYSFEGQAMVLPLE 255
Query: 353 NEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASV 532
N +K P+ G GVL+ AM +I+ Y +G FGY+ +G + GS+TLNLP+ L+
Sbjct: 256 NSLKHPQDMRGLTGVLSTAMNVVIVFYAFLGFFGYIAFGPDVRGSLTLNLPN--SVLSVT 313
Query: 533 VQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSK-FRVVWEYIVRTIIVLITFGLXA 709
V+ LL + + + L ++ + +L N K + Y +R ++L++ L
Sbjct: 314 VKGLLVLKVLLGNALQLFIIVQMLLPSLQAKVSENRKLIHKILPYALRLSLMLVSLSLAL 373
Query: 710 AVPELDLFISLFGALCLSALGLXFPAFIQSCTY 808
AVP L I G + L P+F+ +
Sbjct: 374 AVPNLTEIIPFVGITSGLLISLIIPSFLDCIVF 406
>Z97191-2|CAB10025.1| 481|Caenorhabditis elegans Hypothetical
protein H32K16.1 protein.
Length = 481
Score = 105 bits (251), Expect = 5e-23
Identities = 74/276 (26%), Positives = 131/276 (47%), Gaps = 8/276 (2%)
Frame = +2
Query: 5 YQIGTCCVYVVFVSENIHFVLVKRFNVE----ITVFQVMLCILLPLILINWVRDLKYLAP 172
+Q+G V++VF E H + + F + + ++L +P +L+N++ +K L
Sbjct: 165 FQLGVITVFMVFAVE--HVIEIWEFFADSPPPFSKCVMILMYFVPQMLLNFIGHMKLLTI 222
Query: 173 FSAVANVVTIVGFGIILYYIFRET--PTLEGKEPVGRLADFPLFFGTVLFALEAIGVILP 346
NV+ +I + T PT E G + L G ++++ E ++LP
Sbjct: 223 LCLFGNVIIFAAIVLITKELMVHTWYPTWELGSVTG-IEGISLAAGALIYSFEGQAMVLP 281
Query: 347 LENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLA 526
+EN +K PK G GVL+ AM + +LY +G FGY+ +G GS+TLNLP+ T++
Sbjct: 282 MENSLKYPKDMTGATGVLSTAMNLVTVLYAFLGFFGYVTFGPAVQGSLTLNLPNSILTVS 341
Query: 527 SVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRV--VWEYIVRTIIVLITFG 700
++ LL IF + YV + +L + ++ + V + Y +R ++LI+
Sbjct: 342 --IKGLLVLKIFFGSAIQLYVIVQMLLPS-LRSKISEDRKMVHRLLPYALRLGLMLISLC 398
Query: 701 LXAAVPELDLFISLFGALCLSALGLXFPAFIQSCTY 808
+ VP L I L G + L P+F+ +
Sbjct: 399 IALIVPNLMQIIPLVGITSGLLISLILPSFLDCMVF 434
>AL034393-17|CAA22315.1| 503|Caenorhabditis elegans Hypothetical
protein Y18D10A.23 protein.
Length = 503
Score = 59.3 bits (137), Expect = 3e-09
Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 9/282 (3%)
Frame = +2
Query: 23 CVYVVFVSENIHFVLVKRFNVEIT--VFQVMLCILL-PLILINWVRDLKYLAPFSAVANV 193
CV ++ +EN +L F++ + VF V + ++L P L+ D LA SAV++
Sbjct: 141 CVLLLISAENFTNLLNTFFHLHLDFCVFIVAIALVLWPFSLLQSPMDFWQLAVISAVSST 200
Query: 194 VT--IVGFG----IILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLEN 355
+ ++ FG + +R+ P+LE K+ F L +GT++FA G +++
Sbjct: 201 IAAGLIVFGASWDMTSCVPYRQMPSLEAKQ-------FTLAYGTIVFAFGGHGAFPTIQH 253
Query: 356 EMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVV 535
+M P F V++ + I I ++Y+ + + G + YG+ + ++ +PS T +
Sbjct: 254 DMAMPHQF--NKSVIS-SYILITLVYLAVSITGLIAYGDSMIDTV---IPSIQLTWVAQT 307
Query: 536 QCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXAAV 715
+L A + + + E+I + RV +VRT I+ + +V
Sbjct: 308 INILITAHILPTIIIVLSPLSQQVEEWIKIPNQFGCRRV----LVRTFILFLVMFTALSV 363
Query: 716 PELDLFISLFGALCLSALGLXFPAFIQSCTYWYYVSRSERIR 841
+L LF+ L GA ++ + + P+ +W ++ S + R
Sbjct: 364 LKLGLFLDLVGATTITLMTMLLPSI-----FWLFMQASAKKR 400
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 59.3 bits (137), Expect = 3e-09
Identities = 60/266 (22%), Positives = 115/266 (43%), Gaps = 7/266 (2%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCI---LLPLILINWVRDLKYLAPFS 178
Q GT V+V+ ++N +L F ++ ++L + + P L +D Y +
Sbjct: 108 QFGTAVVFVLLAAKNGENMLHANFGTHVSFCYMILIVGLLVFPFTLPKSPKDFWYAVVAA 167
Query: 179 AVANVVTIVG--FGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLE 352
++ +++V FG + Y E E P + + FGT++F+ ++
Sbjct: 168 MISTTISVVLIIFGTVQDY---EVCHKEVFYPSFNFSKTLMSFGTIMFSYGGHCAFPTIQ 224
Query: 353 NEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPS-ETETLAS 529
++MK P F + A I I I Y+ + + GY YG SI +PS + + +
Sbjct: 225 HDMKKPHHFSRSIII---AFIIIFIFYLPVSMSGYFVYGSSLTDSI---IPSIQNINIQT 278
Query: 530 VVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIV-RTIIVLITFGLX 706
+V L++ + LA + + L E+ +LN W+ IV R +++L +
Sbjct: 279 IVNILISLHV----SLALTITFNPLNQEF--EEILNMSHDFGWQRIVARALVMLSVVFVA 332
Query: 707 AAVPELDLFISLFGALCLSALGLXFP 784
+VP + + L G ++ + L P
Sbjct: 333 ESVPNFGVLLDLVGGSTITMMALVVP 358
>U23518-2|AAC70884.4| 496|Caenorhabditis elegans Hypothetical
protein F21D12.3 protein.
Length = 496
Score = 54.8 bits (126), Expect = 8e-08
Identities = 55/255 (21%), Positives = 109/255 (42%), Gaps = 7/255 (2%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVE----ITVFQVMLCILLPLILINWVRDLKYLAPF 175
Q G VY++ + IHF + +V+ V V+ ++ P L+ + + F
Sbjct: 140 QFGVSVVYLLLSANIIHFFISHVLHVDSISNCLVITVLAFLIWPFTLLASPGEFWVVIVF 199
Query: 176 SAVANVVTIVGF--GIILYYIFRETPTLEGKE-PVGRLADFPLFFGTVLFALEAIGVILP 346
+ + V+ +V GI L T PV L FG LFA V
Sbjct: 200 AMLTTVIAVVSIHTGIAL----DSTACFSAVSYPVTTSTSTILSFGIFLFAFSGHYVFPT 255
Query: 347 LENEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLA 526
++++MK P+ F + + ++ILY+ + +F ++ YG+ S+ ++ ++ +L
Sbjct: 256 IQHDMKNPRDFTKS---IFAGFLGVVILYLPLCIFAFVVYGDSMTDSVIYSI--QSPSLQ 310
Query: 527 SVVQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLX 706
+ +++F +T + I+ L E ++ F + I RTI++ + +
Sbjct: 311 LLANLMISFHCIMT----LVIVINPLNQEVEHYAKISHAFG-IGRVITRTIVLFLVLFVA 365
Query: 707 AAVPELDLFISLFGA 751
VP+ ++L GA
Sbjct: 366 LTVPDFQPVMNLVGA 380
>Z30423-12|CAA83006.2| 486|Caenorhabditis elegans Hypothetical
protein T20G5.6 protein.
Length = 486
Score = 51.6 bits (118), Expect = 7e-07
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 13/272 (4%)
Frame = +2
Query: 11 IGTCCVYVVFVSENIH--FVLVKRFN-VEITVFQVMLCILLPLILINWVRDLKYLAPFSA 181
+ TC +Y+V ++ + F V + + IT ++ C L + I + L+ F+A
Sbjct: 178 LSTCIIYLVLAADLLQSCFPSVDKAGWMMITSASLLTCSFLDDLQI-----VSRLSFFNA 232
Query: 182 VANVVTIVGFGIILYYI-FRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILP-LEN 355
++++ IV ++LY + F + + P G V+F + + LP LE
Sbjct: 233 ISHL--IVNLIMVLYCLSFVSQWSFSTITFSLNINTLPTIVGMVVFGYTS-HIFLPNLEG 289
Query: 356 EMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVV 535
MK P F +L + I+ + V G+ G+L +GE + I+ +LP+++ + +V
Sbjct: 290 NMKNPAQFNV---MLKWSHIAAAVFKVVFGMLGFLTFGELTQEEISNSLPNQSFKI--LV 344
Query: 536 QCLLAFAIFITHGLACYVAIDILWNE-YIGVRLLN-------SKFRVVWEYIVRTIIVLI 691
+L +++ L Y A+ +L N ++G K W +R I+VL
Sbjct: 345 NLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVLF 404
Query: 692 TFGLXAAVPELDLFISLFGALCLSALGLXFPA 787
T + +VP L + L G + + L +PA
Sbjct: 405 TLFVALSVPYLVELMGLVGNITGTMLSFIWPA 436
>AF031935-1|AAB87066.1| 486|Caenorhabditis elegans UNC-47 protein.
Length = 486
Score = 51.6 bits (118), Expect = 7e-07
Identities = 65/272 (23%), Positives = 122/272 (44%), Gaps = 13/272 (4%)
Frame = +2
Query: 11 IGTCCVYVVFVSENIH--FVLVKRFN-VEITVFQVMLCILLPLILINWVRDLKYLAPFSA 181
+ TC +Y+V ++ + F V + + IT ++ C L + I + L+ F+A
Sbjct: 178 LSTCIIYLVLAADLLQSCFPSVDKAGWMMITSASLLTCSFLDDLQI-----VSRLSFFNA 232
Query: 182 VANVVTIVGFGIILYYI-FRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILP-LEN 355
++++ IV ++LY + F + + P G V+F + + LP LE
Sbjct: 233 ISHL--IVNLIMVLYCLSFVSQWSFSTITFSLNINTLPTIVGMVVFGYTS-HIFLPNLEG 289
Query: 356 EMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVV 535
MK P F +L + I+ + V G+ G+L +GE + I+ +LP+++ + +V
Sbjct: 290 NMKNPAQFNV---MLKWSHIAAAVFKVVFGMLGFLTFGELTQEEISNSLPNQSFKI--LV 344
Query: 536 QCLLAFAIFITHGLACYVAIDILWNE-YIGVRLLN-------SKFRVVWEYIVRTIIVLI 691
+L +++ L Y A+ +L N ++G K W +R I+VL
Sbjct: 345 NLILVVKALLSYPLPFYAAVQLLKNNLFLGYPQTPFTSCYSPDKSLREWAVTLRIILVLF 404
Query: 692 TFGLXAAVPELDLFISLFGALCLSALGLXFPA 787
T + +VP L + L G + + L +PA
Sbjct: 405 TLFVALSVPYLVELMGLVGNITGTMLSFIWPA 436
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 49.6 bits (113), Expect = 3e-06
Identities = 68/281 (24%), Positives = 123/281 (43%), Gaps = 11/281 (3%)
Frame = +2
Query: 26 VYVVFVSENIHFVLVKRFNVEITVFQVMLCI---LLPLILINWVRDLKY---LAPFSAVA 187
VY++ S+NI +++ I+ ++L + LLPL + +D + +A + A
Sbjct: 158 VYLLLASKNIMNMIIAFSGTHISFCILILIVATCLLPLCFLKSPQDFWWAVVIAMMTTSA 217
Query: 188 NVVTIVGFGIILYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKT 367
V+ I+ II Y + P K P R + L GT+LF++ ++++MK
Sbjct: 218 AVILIIVGSIIDYG--KCAPF--AKLPPFRTTNLFLSMGTLLFSVGGHSAFPTIQHDMKQ 273
Query: 368 PKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQCLL 547
PK F + A + +Y+ + + GYL YG+ SI +PS V
Sbjct: 274 PKEFTRSVFL---AFTIMAFMYIPVCIMGYLVYGDSLRDSI---IPS-----IQTVWIQQ 322
Query: 548 AFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEY-----IVRTIIVLITFGLXAA 712
A I IT + C + + I++N ++ + F V + IVRT I++ + +
Sbjct: 323 AINIMIT--VHCILTLTIVFNPL--MQEVEELFHVPQRFGPKRAIVRTGIMVAVVFVAES 378
Query: 713 VPELDLFISLFGALCLSALGLXFPAFIQSCTYWYYVSRSER 835
VP + L G L+ + P C ++ Y++ +R
Sbjct: 379 VPTFGPLLDLVGGSTLTLTSVIMP-----CLFYIYLNAYKR 414
>U00055-6|AAA50724.1| 494|Caenorhabditis elegans Hypothetical
protein R02F2.8 protein.
Length = 494
Score = 44.0 bits (99), Expect = 1e-04
Identities = 58/264 (21%), Positives = 115/264 (43%), Gaps = 5/264 (1%)
Frame = +2
Query: 8 QIGTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILL---PLILINWVRDLKYLAPFS 178
QIG V V+ ++N+ +L F+++I ++L + L P ++ A FS
Sbjct: 121 QIGFATVLVLLAAKNLSILLHFFFSLDINQCYLILIVGLAVWPATMLPSPMHFWQAALFS 180
Query: 179 AVANVVTIVGFGIILYYIFRETPTLEGKEP--VGRLADFPLFFGTVLFALEAIGVILPLE 352
A ++ ++ +++ + + P P L + FGT +FA + ++
Sbjct: 181 AGSSTCAVI---LVVVGLAHDAPVCAQDAPHEEPNLLKAFMAFGTFVFAFGGHATLPTIQ 237
Query: 353 NEMKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASV 532
++MK P FV VL A+I +LY+ + + GY YG +I +L + + +
Sbjct: 238 HDMKKPAHFVHSV-VL--AIIFCTMLYMCIAVGGYFVYGSTVGEAIIPSL--QIKWIQQT 292
Query: 533 VQCLLAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXAA 712
V ++A + T + ++ I E + + KF V ++VR+I+ + +
Sbjct: 293 VNLMIAVHVITT--IVIVMSPPIQQVEQL--LKVPHKFGVK-RFLVRSILFWFVIFIGLS 347
Query: 713 VPELDLFISLFGALCLSALGLXFP 784
+P + L GA + + L P
Sbjct: 348 IPHFGPVLDLIGASTMVLMTLILP 371
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Frame = +2
Query: 14 GTCCVYVVFVSENIHFVLVKRFNVEITVFQVMLCILLPLILINWVRDLKYLAPFSAVANV 193
G V+ + ++ + VL F + T+ ++ + L L ++ + S VA +
Sbjct: 104 GGTAVFSLLAAKTLAEVL-NGFGIGATMCTTLITVGLILWPFVMLKSPAHFWQVSIVATI 162
Query: 194 VTIVGFGIILYYIFRETPTLEGKEPVGRLADF-PLF----FGTVLFALEAIGVILPLENE 358
T+ +IL+ F + +G P DF P T++FA I + ++
Sbjct: 163 STVTAVALILFGYFLDA---KGCYPHSSYPDFTPTAASNSLATIIFAYGGHPCIPTIVHD 219
Query: 359 MKTPKSFVGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPSETETLASVVQ 538
MKTP+ + F + I++ +LY + LFG+ YG+ SI ++ + ++L +
Sbjct: 220 MKTPQHY---FRCFLLSYIALFLLYTPVSLFGFWIYGDSVSDSIISSI--QNDSLRRGIS 274
Query: 539 CLLAFAIFIT 568
L+A +F +
Sbjct: 275 ILIAVHVFFS 284
>U39744-1|AAK18882.1| 471|Caenorhabditis elegans Hypothetical
protein C03F11.1 protein.
Length = 471
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +2
Query: 209 FGIILYYIFRETPT--LEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFV 382
F II+ ++F + GK P L L+F + F L G I+P N + FV
Sbjct: 274 FWIIMSWMFVQCERYGFSGKNPQSILYSNSLWFIAITFMLNGYGDIVPQTNAGRFIAIFV 333
Query: 383 GKFG-VLNRAMISII 424
G G V++ +I++I
Sbjct: 334 GVVGAVISSILIAVI 348
>Z83319-5|CAB05907.2| 446|Caenorhabditis elegans Hypothetical
protein T02D1.4 protein.
Length = 446
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 545 LAFAIFITHGLACYVAIDILWNEYIGVRLLNSKFRVVWEYIVRTIIVLITFGLXAAVPEL 724
L FAI + GL ++A ILW + S F + R ++ L A +P +
Sbjct: 266 LLFAIVVPMGLLLFMAASILWKLVLKRSDFVSHFTAEKRCVTRITLITTGLQLIAELPPI 325
Query: 725 DLFI--SLFG 748
+F+ ++FG
Sbjct: 326 PVFLYATIFG 335
>AF043697-2|AAB97556.1| 820|Caenorhabditis elegans Patched related
family protein 11 protein.
Length = 820
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 711 RFRNWICSFPCSVLCVCLLSGXHSLPSYKAARTGTMFHALNAF 839
++ +++CS V C+ +L G ++L +Y T F AF
Sbjct: 423 KYSSFVCSVKGRVACIMVLLGMYALTTYGVVTMKTTFEPAKAF 465
>AF016451-6|AAB66000.2| 379|Caenorhabditis elegans Serpentine
receptor, class w protein140 protein.
Length = 379
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 181 CSQCGDYSWIRYHLVLHIQRNTDFRRQRTCW 273
C Q G Y+W+ ++LVL R D+ R+ + W
Sbjct: 106 CFQSGSYAWVLFNLVLEALR--DYSRRCSTW 134
>Z83233-4|CAB05758.1| 298|Caenorhabditis elegans Hypothetical
protein K06B4.4 protein.
Length = 298
Score = 29.1 bits (62), Expect = 4.3
Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 4/115 (3%)
Frame = +2
Query: 221 LYYIFRETPTLEGKEPVGRLADFPLFFGTVLFALEAIGVILPLENEMKTPKSFVGKFGVL 400
+ Y+F + G V R + F +LFA+ + + +E E K SF G G +
Sbjct: 161 MLYLFDSFCAVTGDRKVERFDNIGFFVSFILFAIIYGLLFVLIEPENKRWFSFCGILGAI 220
Query: 401 NRAMISIIILYVGMGL----FGYLRYGEESMGSITLNLPSETETLASVVQCLLAF 553
+I Y+ + L Y M I++ S ++ ++ C ++F
Sbjct: 221 RLVTSTIFYFYIYLRLKVEDNRQFLYWTNRMAPISMLFMSGLLMISVLIMCKMSF 275
>AC006814-3|AAF60861.1| 382|Caenorhabditis elegans Hypothetical
protein Y69F12A.1 protein.
Length = 382
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 332 GVILPLENEMKTPKSF-VGKFGVLNRAMISIIILYVGMGLFGYLRYGEESMGSITLNLPS 508
GV+L L N +K+P + G++N + +++ VGM L+ + + ++T L
Sbjct: 115 GVLLAL-NHLKSPHFLEMVDHGIVNNRFLFVVLKLVGMNLWDMRAHLPDKKYTLTTTLRI 173
Query: 509 ETETLASV 532
+TLA +
Sbjct: 174 AEQTLAGL 181
>Z78545-2|CAB01766.1| 596|Caenorhabditis elegans Hypothetical
protein M03B6.2 protein.
Length = 596
Score = 28.7 bits (61), Expect = 5.7
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +2
Query: 347 LENEMKTPKSF-VGKFGVLNRAMISIIILYVGMGLFG----YLRYGEESMGSITLNLPSE 511
+E KSF V GVLN I+ +G G+ + I L +
Sbjct: 415 IEGLTTAEKSFTVSLIGVLN------IVARIGCGILADRPEVSALAVNNFALIAAGLATM 468
Query: 512 TETLASVVQCLLAFAIFITHGLACYVAI-DILWNEYIGVRLLNSKFRVVWEYI 667
T L + LAF + + G+AC+ A+ I+ E IG+ L++ F ++ ++
Sbjct: 469 TVPLYTAYWQFLAFCVPFSIGVACFAALRSIIVVELIGLEKLSNAFGILLTFM 521
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2
Query: 351 SNGRITPMASRANRTVPKNRGKSASR 274
S GR TP+A V ++R +SASR
Sbjct: 16 SKGRFTPLAKTKRTVVSRSRSRSASR 41
>Z81124-4|CAB03372.1| 341|Caenorhabditis elegans Hypothetical
protein T21B4.6 protein.
Length = 341
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 17 TCCVYVVFVSENIHFVLVKRFNVEITVF-QVMLCILLPLILI--NWVRDLKYLAPFSAVA 187
TCC+Y +F+ + F + V+ F ++L LP++L+ V LK + VA
Sbjct: 230 TCCIYYLFIDRS-SFTSAQTQKVQARSFIGIVLQTFLPILLVVLALVTLLKKNGGYDQVA 288
Query: 188 NVVTIV 205
N +T +
Sbjct: 289 NNLTFI 294
>AF537097-1|AAN60468.1| 110|Caenorhabditis elegans PHF-5 protein.
Length = 110
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 619 RCATTEQQV-PCRMGIYCED--YHRTDHFRLXCGGSGIGSVHFPVRCSVSVCSRAXIP 783
RC + V PC + CE+ Y + CGG+G+ ++ C++ R P
Sbjct: 29 RCVICDSHVRPCTLVRICEECNYGSYQGRCVICGGAGVSDAYYCKECTILEKDRDGCP 86
>AF537096-1|AAN60467.1| 110|Caenorhabditis elegans PHF-5 protein.
Length = 110
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 619 RCATTEQQV-PCRMGIYCED--YHRTDHFRLXCGGSGIGSVHFPVRCSVSVCSRAXIP 783
RC + V PC + CE+ Y + CGG+G+ ++ C++ R P
Sbjct: 29 RCVICDSHVRPCTLVRICEECNYGSYQGRCVICGGAGVSDAYYCKECTILEKDRDGCP 86
>AC026301-14|AAP13738.1| 110|Caenorhabditis elegans Phd finger
family protein 5 protein.
Length = 110
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +1
Query: 619 RCATTEQQV-PCRMGIYCED--YHRTDHFRLXCGGSGIGSVHFPVRCSVSVCSRAXIP 783
RC + V PC + CE+ Y + CGG+G+ ++ C++ R P
Sbjct: 29 RCVICDSHVRPCTLVRICEECNYGSYQGRCVICGGAGVSDAYYCKECTILEKDRDGCP 86
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,256,933
Number of Sequences: 27780
Number of extensions: 487945
Number of successful extensions: 1489
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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