Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_M22
         (568 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0U9Y0 Cluster: Putative uncharacterized protein; n=1; ...    34   2.0  
UniRef50_Q57484 Cluster: Uncharacterized membrane protein HI0867...    33   4.7  
UniRef50_UPI00006CAE5A Cluster: hypothetical protein TTHERM_0076...    32   8.1  

>UniRef50_Q0U9Y0 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 1393

 Score = 34.3 bits (75), Expect = 2.0
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = -3

Query: 200 YVTESKGRTPSNXPDVTALKATKFXQGLAPKQSAGSPPKXKVTQTQKTSVFNDMLVTNKA 21
           + + SKG T +N P    L A +  +  A  + A  PP  K  + +K ++F+ +     A
Sbjct: 531 FASLSKGPTTTNSPGFNFLSAAQSKESAAVSEKAAEPPAEKAPEAKKYNLFSALSTPQPA 590

Query: 20  WISSA 6
             + A
Sbjct: 591 KTAEA 595


>UniRef50_Q57484 Cluster: Uncharacterized membrane protein HI0867;
           n=29; Pasteurellaceae|Rep: Uncharacterized membrane
           protein HI0867 - Haemophilus influenzae
          Length = 404

 Score = 33.1 bits (72), Expect = 4.7
 Identities = 25/60 (41%), Positives = 30/60 (50%)
 Frame = -2

Query: 366 LFYHGFVQRMQIVSRFSSVLVKVHXRGVCAQLIFTRLVYDSIVRAEVSGAFCFLRVCYRI 187
           LFYHG  + +     F SVL  +   G    LIFT +VY  I  A V GA   L V Y+I
Sbjct: 339 LFYHGKTKEIS----FCSVLSTMIYLGALGGLIFTDVVY--IPYASVLGALGILPVLYKI 392


>UniRef50_UPI00006CAE5A Cluster: hypothetical protein
           TTHERM_00762990; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00762990 - Tetrahymena
           thermophila SB210
          Length = 506

 Score = 32.3 bits (70), Expect = 8.1
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +1

Query: 37  NMSLKTLVFCVCVTLXFGGDPALCFGANPXINLVAFKAVTSG---XFDGVLPFDSVTYSK 207
           N +L   V  +C  + FGG   + F   P        ++T+G    F  VL +     S+
Sbjct: 367 NTNLNREVTIICGDIHFGGHTDIYFQNKPAFKQFTSSSITNGVKDKFKRVLSYLGAAVSE 426

Query: 208 EAECTRYFCAHD 243
           + +   +FC HD
Sbjct: 427 DLKGGFHFCNHD 438


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,759,492
Number of Sequences: 1657284
Number of extensions: 8198587
Number of successful extensions: 18255
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18250
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)