Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_M22
         (568 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ012755-1|CAA10171.1|  354|Homo sapiens TL132 protein protein.        33   0.93 
X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.           32   1.6  
BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.         32   1.6  
X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein.               31   3.7  
X63546-2|CAA45109.1|  586|Homo sapiens oncogene protein.               31   3.7  
BC094680-1|AAH94680.1|  389|Homo sapiens USP32 protein protein.        31   3.7  
BC070497-1|AAH70497.1|  367|Homo sapiens USP32 protein protein.        31   3.7  
AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific prot...    31   3.7  
AF533230-1|AAM97922.1| 1604|Homo sapiens ubiquitin-specific prot...    31   3.7  
AF350251-1|AAK30207.1| 1274|Homo sapiens ubiquitin specific prot...    31   3.7  

>AJ012755-1|CAA10171.1|  354|Homo sapiens TL132 protein protein.
          Length = 354

 Score = 32.7 bits (71), Expect = 0.93
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 193 VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNRR 318
           VTY+K   C +++C + ++  +   DE+ TD+  +  Y+ +R
Sbjct: 278 VTYAKNPNC-KWYCYNGSICEEHHPDEIDTDSAYILFYEQQR 318


>X86691-1|CAA60384.1| 1912|Homo sapiens Mi-2 protein protein.
          Length = 1912

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 232  RSIGCILLPSSMLQNQREGHHRTXLM*QP*RPLNLXRDWLQ 110
            R+ G +LL   ML+N +EG HR  +  Q  + L+L  D+L+
Sbjct: 1047 RASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLE 1087


>BC038596-1|AAH38596.1| 1937|Homo sapiens CHD4 protein protein.
          Length = 1937

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -1

Query: 232  RSIGCILLPSSMLQNQREGHHRTXLM*QP*RPLNLXRDWLQ 110
            R+ G +LL   ML+N +EG HR  +  Q  + L+L  D+L+
Sbjct: 1044 RASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLE 1084


>X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein.
          Length = 1089

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 193  VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
            +TY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 1013 ITYAKNPNC-KWYCYNDSSCEELHPDEIDTDSAYILFYEQQ 1052


>X63546-2|CAA45109.1|  586|Homo sapiens oncogene protein.
          Length = 586

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 193 VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
           +TY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 510 ITYAKNPNC-KWYCYNDSSCEELHPDEIDTDSAYILFYEQQ 549


>BC094680-1|AAH94680.1|  389|Homo sapiens USP32 protein protein.
          Length = 389

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 193 VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
           VTY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 313 VTYAKNPNC-KWYCYNDSSCKELHPDEIDTDSAYILFYEQQ 352


>BC070497-1|AAH70497.1|  367|Homo sapiens USP32 protein protein.
          Length = 367

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 193 VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
           VTY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 291 VTYAKNPNC-KWYCYNDSSCKELHPDEIDTDSAYILFYEQQ 330


>AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific protease
            USP6 protein.
          Length = 1406

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +1

Query: 193  VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
            +TY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 1330 ITYAKNPNC-KWYCYNDSSCEELHPDEIDTDSAYILFYEQQ 1369


>AF533230-1|AAM97922.1| 1604|Homo sapiens ubiquitin-specific protease
            USP32 protein.
          Length = 1604

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 193  VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
            VTY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 1528 VTYAKNPNC-KWYCYNDSSCKELHPDEIDTDSAYILFYEQQ 1567


>AF350251-1|AAK30207.1| 1274|Homo sapiens ubiquitin specific protease
            protein.
          Length = 1274

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 193  VTYSKEAECTRYFCAHDAVIHQSCKDELSTDTPXMYLYQNR 315
            VTY+K   C +++C +D+   +   DE+ TD+  +  Y+ +
Sbjct: 1198 VTYAKNPNC-KWYCYNDSSCKELHPDEIDTDSAYILFYEQQ 1237


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,978,823
Number of Sequences: 237096
Number of extensions: 1294443
Number of successful extensions: 2098
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)