Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_M19
         (851 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    29   0.035
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    29   0.035
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   7.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   7.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.4  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 29.5 bits (63), Expect = 0.035
 Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
 Frame = +3

Query: 195 VKYNQCNSMLVFWNKNQIFIYDNLKFPNPNYSKY-ILPQYHIHDLLVYNNYIVCLDINGS 371
           +++N   S  ++   + I +Y+     N N S   + P Y     +V+   I+CL + G+
Sbjct: 27  IEFNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86

Query: 372 VHIISLKFK------NTNVLIRNMFSPLEQNVIAICNFTPETILFLKQMSDNCLL 518
           V +  + FK      +TN+ + N+ S  +  V+ +C  TP  ++ +    +  +L
Sbjct: 87  VMVPIVIFKTKDMRNSTNIFLVNL-SVADLMVLLVC--TPTVLVEVNSRPETWVL 138


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 29.5 bits (63), Expect = 0.035
 Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
 Frame = +3

Query: 195 VKYNQCNSMLVFWNKNQIFIYDNLKFPNPNYSKY-ILPQYHIHDLLVYNNYIVCLDINGS 371
           +++N   S  ++   + I +Y+     N N S   + P Y     +V+   I+CL + G+
Sbjct: 27  IEFNISTSNYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGN 86

Query: 372 VHIISLKFK------NTNVLIRNMFSPLEQNVIAICNFTPETILFLKQMSDNCLL 518
           V +  + FK      +TN+ + N+ S  +  V+ +C  TP  ++ +    +  +L
Sbjct: 87  VMVPIVIFKTKDMRNSTNIFLVNL-SVADLMVLLVC--TPTVLVEVNSRPETWVL 138


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 535 ILNYNQRKKYFFLSLQRIF 591
           ++N+N R+ YF LS  + F
Sbjct: 25  LVNFNHRESYFRLSKAKSF 43


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 487 F*NKCLITVYYLFI 528
           F N CL+ VYY F+
Sbjct: 171 FLNSCLMDVYYEFL 184


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 499 CLITVYYLFIK*ILNYNQRKKYFFLSL 579
           CL  +     K  LNYN  KK +FL +
Sbjct: 34  CLFPITINIRKNGLNYNFTKKCYFLRM 60


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 255 YDNLKFPNPNYSKYILPQYHIHDLLVYNNY 344
           Y N  FP  N+  Y  P    H+ ++  ++
Sbjct: 90  YGNSNFPPINHQNYNEPYQRTHENMLLRHH 119


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 6/30 (20%), Positives = 17/30 (56%)
 Frame = +3

Query: 369 SVHIISLKFKNTNVLIRNMFSPLEQNVIAI 458
           ++ ++ L F N   + +  F P+E +++ +
Sbjct: 224 NIKVLDLSFNNITSVAKQFFRPVELSLMQL 253


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 255 YDNLKFPNPNYSKYILPQYHIHDLLVYNNY 344
           Y N  FP  N+  Y  P    H+ ++  ++
Sbjct: 90  YGNSNFPPINHQNYNEPYQRTHENMLLRHH 119


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = +3

Query: 255 YDNLKFPNPNYSKYILPQYHIHDLLVYNNY 344
           Y N  FP  N+  Y  P    H+ ++  ++
Sbjct: 90  YGNSNFPPINHQNYNEPYQRTHENMLLRHH 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,293
Number of Sequences: 336
Number of extensions: 4558
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)