Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_M19
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   5.1  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    23   8.9  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 12/44 (27%), Positives = 23/44 (52%)
 Frame = +3

Query: 573 VSTENFCTKNIQTKCILKTCGLSLNNFNEIKSLFHSNENILYTN 704
           +S E FCT  +   C+L     SL   N++ ++   + ++LY +
Sbjct: 662 LSEEFFCTSGVPQGCVLSPLLFSL-FINDVCNVLPPDGHLLYAD 704


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 119 LWHK*LKIRIIHLEFK*YKCNVVD 48
           +WH+ L  ++I L F  Y  N+V+
Sbjct: 81  IWHQGLLSKLIKLNFPSYLINIVN 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,685
Number of Sequences: 2352
Number of extensions: 15759
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)