Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_M15
         (950 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    42   7e-06
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   3.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   4.6  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 41.9 bits (94), Expect = 7e-06
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 18/232 (7%)
 Frame = +3

Query: 102 LHQVATVKIVNSTIGYIAPNAFHG-VH-DLYAVNLSNNNLKSLHPETFAXXXXXXXXXXX 275
           L  +  V + ++TI  I    F G +H DL  V  S N+++++   TFA           
Sbjct: 65  LRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLD 124

Query: 276 XXXXXFPAAGSENYFLNASSVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDP 455
                   +     F+N  S++ L++    +  I   TF+N+P L  L++A N++S +D 
Sbjct: 125 DNRIE---SLERRAFMNLKSLKRLNLKGNKIATIAYETFQNLPELEDLDLAYNSISSLDF 181

Query: 456 DTFXXXXXXXXXXXRNNHIKSL-----PDDIFSENTELATLHLLK------NPIDTV--- 593
           + F             +H K +     P   F ++T L  L  +K      N I +V   
Sbjct: 182 NIFDQVGSLGMFHVNMSHNKLINLVVAPSVPFEQDTGLGGLQNIKVLDLSFNNITSVAKQ 241

Query: 594 --YGLQISDLLTLNAGQTNIKFVGPSMFNGMGLIANLNLSGNSIEKIHNQAF 743
               +++S L+ L  G   +      +F  M  +  L+LS NS+ ++    F
Sbjct: 242 FFRPVELS-LMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTF 292



 Score = 41.1 bits (92), Expect = 1e-05
 Identities = 20/68 (29%), Positives = 36/68 (52%)
 Frame = +3

Query: 333 SVQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHI 512
           S+ +L + +  +   T + F NMP L  L+++ N+L ++D DTF            +N I
Sbjct: 249 SLMQLYLGHNKLLNATKDLFGNMPHLQVLDLSHNSLYELDFDTFRNTKKLQWLDTSHNRI 308

Query: 513 KSLPDDIF 536
             +P+D+F
Sbjct: 309 SEIPNDLF 316



 Score = 37.5 bits (83), Expect = 2e-04
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
 Frame = +3

Query: 345 LDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLP 524
           LD+SY  +  I A TFK +P L  LN+  N+   ++ +              N    SL 
Sbjct: 399 LDLSYNRLGQIDAGTFKGIPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLDNVSLS 458

Query: 525 DDIFSENTELATLHLLKNPIDTV---YGLQISDLLTLNAGQTNIKFVGPSMFNGMGLIAN 695
                    L +L L  N + TV       IS L  LN    ++  V P + + +  + +
Sbjct: 459 QVPALSTPNLLSLSLAFNSLPTVALEVAGNISSLRYLNLDYNDLSAV-PIVTHSLTELRH 517

Query: 696 LNLSGNSIEKIHN 734
           L+L GN I  + N
Sbjct: 518 LSLEGNPITTLSN 530



 Score = 34.3 bits (75), Expect = 0.001
 Identities = 28/144 (19%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
 Frame = +3

Query: 336 VQELDVSYCNMQYITANTFKNMPGLMYLNVAGNNLSDMDPDTF--XXXXXXXXXXXRNNH 509
           ++ELD+S   ++ +  N+F  +  L  +++  N +  +   TF               N 
Sbjct: 44  LEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQGDIHRDLTEVYFSFNS 103

Query: 510 IKSLPDDIFSENTELATLHLLKNPIDTVYG---LQISDLLTLNAGQTNIKFVGPSMFNGM 680
           ++++    F++  +L  +HL  N I+++     + +  L  LN     I  +    F  +
Sbjct: 104 VRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLKGNKIATIAYETFQNL 163

Query: 681 GLIANLNLSGNSIEKIHNQAFHKL 752
             + +L+L+ NSI  +    F ++
Sbjct: 164 PELEDLDLAYNSISSLDFNIFDQV 187



 Score = 30.7 bits (66), Expect = 0.017
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 5/137 (3%)
 Frame = +3

Query: 363 NMQYITANTFKNMPGLMYLNVAGNNLSDMDPDTFXXXXXXXXXXXRNNHIKSLPDDIFSE 542
           ++Q   ++  K +  L  L+++ N L ++  ++F           ++N I+ +    F  
Sbjct: 29  SVQNFPSDAIKILNRLEELDLSNNRLRNVPDNSFHFLRSLKKVHLQDNTIEMIHRGTFQG 88

Query: 543 NT--ELATLHLLKNPIDTVYGLQISDLLTL---NAGQTNIKFVGPSMFNGMGLIANLNLS 707
           +   +L  ++   N +  V     +DL+ L   +     I+ +    F  +  +  LNL 
Sbjct: 89  DIHRDLTEVYFSFNSVRNVQQHTFADLIQLEQIHLDDNRIESLERRAFMNLKSLKRLNLK 148

Query: 708 GNSIEKIHNQAFHKLVE 758
           GN I  I  + F  L E
Sbjct: 149 GNKIATIAYETFQNLPE 165


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 297 QEI*GDCLKALEVTASYCSQTSQD 226
           QE+  +   AL+ + S CSQ  QD
Sbjct: 59  QELKNNLADALQTSCSKCSQRQQD 82


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 312 NYFLNASSVQELDVSYCNMQYITANTFKNMPGLM 413
           N FL A+ +   D+S      +  N FK++   M
Sbjct: 371 NMFLKATEMSPTDISLVGFFDVNRNLFKSLLATM 404


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,009
Number of Sequences: 336
Number of extensions: 3910
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26789147
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)