Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M14
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence si... 191 2e-48
AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein. 188 2e-47
AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein. 188 2e-47
BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence si... 151 4e-36
AB074181-1|BAE45741.1| 164|Homo sapiens putative protein produc... 150 7e-36
BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processi... 31 4.0
BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein. 31 4.0
>BC008430-1|AAH08430.1| 205|Homo sapiens family with sequence
similarity 18, member B protein.
Length = 205
Score = 191 bits (466), Expect = 2e-48
Identities = 85/165 (51%), Positives = 113/165 (68%), Gaps = 10/165 (6%)
Frame = +1
Query: 373 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 540
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LCG S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCGLLSSSFITCMVTIIL 70
Query: 541 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 702
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 703 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIALTLTGANLYGYIKCK 837
L CP++W F LF + KW+ +V++ + L GANLYGYI+CK
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCK 175
>AF151906-1|AAD34143.1| 181|Homo sapiens CGI-148 protein protein.
Length = 181
Score = 188 bits (459), Expect = 2e-47
Identities = 85/169 (50%), Positives = 113/169 (66%), Gaps = 10/169 (5%)
Frame = +1
Query: 373 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 540
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 541 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 702
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 703 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIALTLTGANLYGYIKCKXGAK 849
L CP++W F LF + KW+ +V++ + L GANLYGYI+CK K
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCKVRKK 179
>AF223467-1|AAF64142.1| 205|Homo sapiens NPD008 protein protein.
Length = 205
Score = 188 bits (458), Expect = 2e-47
Identities = 84/165 (50%), Positives = 112/165 (67%), Gaps = 10/165 (6%)
Frame = +1
Query: 373 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 540
+D ++ EE+ N+ + HP FFHL FR SAIIVY+LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVYLLCELLSSSFITCMVTIIL 70
Query: 541 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 702
LLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 703 LTLCPLVWSTFFIFCLFGLKFKWMLLVLIALTLTGANLYGYIKCK 837
L CP++W F LF + KW+ +V++ + L GANLYGYI+CK
Sbjct: 131 LIACPVLWVIFAFSALFSFRVKWLAVVIMGVVLQGANLYGYIRCK 175
>BC011952-1|AAH11952.1| 276|Homo sapiens family with sequence
similarity 18, member B2 protein.
Length = 276
Score = 151 bits (365), Expect = 4e-36
Identities = 73/148 (49%), Positives = 93/148 (62%), Gaps = 14/148 (9%)
Frame = +1
Query: 373 DDDTIAFG----EEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFV 528
+DDT A EE+ N+ + HP FFHL FR SAIIV +LC S SFI V
Sbjct: 7 NDDTEAVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMV 66
Query: 529 LVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRL 690
+ILLLS DFW VKN++GRL+VGLRWWN++D++GKSHWVFE+R+ N ESR+
Sbjct: 67 TIILLLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKSHWVFESRKESSQENKTVSEAESRI 126
Query: 691 FWMGLTLCPLVWSTFFIFCLFGLKFKWM 774
FW+GL C ++W F LF KW+
Sbjct: 127 FWLGLIACSVLWVIFAFSALFSFTVKWL 154
>AB074181-1|BAE45741.1| 164|Homo sapiens putative protein product
of Nbla10383 protein.
Length = 164
Score = 150 bits (363), Expect = 7e-36
Identities = 69/144 (47%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
Frame = +1
Query: 373 DDDTIAFGEEDNANK----QFVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVIL 540
+D ++ EE+ N+ + HP FFHL FR SAIIV +LC S SFI V +IL
Sbjct: 11 EDVSLFDAEEETTNRPRKAKIRHPVASFFHLFFRVSAIIVCLLCELLSSSFITCMVTIIL 70
Query: 541 LLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWVFEARQSRVNRN------ESRLFWMG 702
LLS DFW VKN++GRL+VGLRWWN++D++GK HWVFE+R+ N ESR+FW+G
Sbjct: 71 LLSCDFWAVKNVTGRLMVGLRWWNHIDEDGKGHWVFESRKESSQENKTVSEAESRIFWLG 130
Query: 703 LTLCPLVWSTFFIFCLFGLKFKWM 774
L C ++W F LF KW+
Sbjct: 131 LIACSVLWVIFAFSALFSFTVKWL 154
>BC067364-1|AAH67364.1| 871|Homo sapiens PRP40 pre-mRNA processing
factor 40 homolog B (S. cerevisiae) protein.
Length = 871
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 609 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 728
E G+Q+Q P P Q PPV GP VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216
>BC050398-1|AAH50398.1| 788|Homo sapiens PRPF40B protein protein.
Length = 788
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 609 ELCGRQRQVALGVRGPSEPGQQEREPPVLDGPDAVPLGLV 728
E G+Q+Q P P Q PPV GP VP GL+
Sbjct: 177 EAAGKQQQQLPQTLQPQPPQPQPDPPPVPPGPTPVPTGLL 216
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,228,631
Number of Sequences: 237096
Number of extensions: 2733195
Number of successful extensions: 6458
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6453
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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