Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M10
(902 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 103 1e-24
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 103 1e-24
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.1
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 23 2.5
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 23 2.5
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 23 4.3
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 23 4.3
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 10.0
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 103 bits (248), Expect = 1e-24
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Frame = +3
Query: 42 SSYIMQDDLLQPRLTVQESMWIAADXXXXXXXXXXXXXXXXXXXXXXXXXWDHRDT---- 209
S+Y+ QDDL LTV+E + A ++T
Sbjct: 154 SAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGI 213
Query: 210 --RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTII 383
R + +SGG+ KRL+ A E++ NP ++F DEPT+GLD G+T+I
Sbjct: 214 LGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVI 273
Query: 384 CTIHQPSASLFALFDRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLE--T 557
CTIHQPS+ ++++FD++ +M+ G + G+ + EL CP +NPAD+ ++
Sbjct: 274 CTIHQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPADYFIQLLA 333
Query: 558 IITDAEAAAQMSELCQNGKLCRKLDRMLARGGKKPILHSDESIQRIFVEHI-AKEQMQKM 734
I+ + E +++ + +C K +R + G K L + + + I + K
Sbjct: 334 IVPEKEESSRQAV----NLICDKFER--SNIGVKIALEAATTEREGGYHDIWMSGESFKS 387
Query: 735 EFPTTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXILLGSIFFG--IGNDG 893
+ + + QF + R + + + ++L L +++G+I+FG + DG
Sbjct: 388 PYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLVIGAIYFGQDLNQDG 442
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 103 bits (248), Expect = 1e-24
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 11/295 (3%)
Frame = +3
Query: 42 SSYIMQDDLLQPRLTVQESMWIAADXXXXXXXXXXXXXXXXXXXXXXXXXWDHRDT---- 209
S+Y+ QDDL LTV+E + A ++T
Sbjct: 154 SAYVQQDDLFIGTLTVKEHLIFQALLRMDRDISYSQRMARVEEVISDLALSKCQNTPIGI 213
Query: 210 --RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTII 383
R + +SGG+ KRL+ A E++ NP ++F DEPT+GLD G+T+I
Sbjct: 214 LGRIKGISGGEKKRLSFAAEVLTNPKLMFCDEPTSGLDSFMALTVMQVLKEMAMTGKTVI 273
Query: 384 CTIHQPSASLFALFDRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLE--T 557
CTIHQPS+ ++++FD++ +M+ G + G+ + EL CP +NPAD+ ++
Sbjct: 274 CTIHQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPADYFIQLLA 333
Query: 558 IITDAEAAAQMSELCQNGKLCRKLDRMLARGGKKPILHSDESIQRIFVEHI-AKEQMQKM 734
I+ + E +++ + +C K +R + G K L + + + I + K
Sbjct: 334 IVPEKEESSRQAV----NLICDKFER--SNIGVKIALEAATTEREGGYHDIWMSGESFKS 387
Query: 735 EFPTTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXILLGSIFFG--IGNDG 893
+ + + QF + R + + + ++L L +++G+I+FG + DG
Sbjct: 388 PYKASCWAQFKAVLWRSILAVFKEPLLIKVRLLQTLIISLVIGAIYFGQDLNQDG 442
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 418 ANREAEGWCIVHMIVLPCLDNSRKSTTSCRIDTMSKP 308
A R A WC++ +P L + +S+ C + KP
Sbjct: 126 AERVAWMWCLIFAFWVPQLGSLFRSSRMCFFKSSKKP 162
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 418 ANREAEGWCIVHMIVLPCLDNSRKSTTSCRIDTMSKP 308
A R A WC++ +P L + +S+ C + KP
Sbjct: 126 AERVAWMWCLIFAFWVPQLGSLFRSSRMCFFKSSKKP 162
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 418 ANREAEGWCIVHMIVLPCLDNSRKSTTSCRIDTMSKP 308
A R A WC++ +P L + +S+ C + KP
Sbjct: 126 AERVAWMWCLIFAFWVPQLGSLFRSSRMCFFKSSKKP 162
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 418 ANREAEGWCIVHMIVLPCLDNSRKSTTSCRIDTMSKP 308
A R A WC++ +P L + +S+ C + KP
Sbjct: 126 AERVAWMWCLIFAFWVPQLGSLFRSSRMCFFKSSKKP 162
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +1
Query: 475 LLFWYRICQSWGTLAP----RPTIQRTSCWKR 558
L F+Y+IC +G + P +P Q+ S WK+
Sbjct: 14 LSFFYKICNIFGIVPPYSFEKPDSQK-SLWKK 44
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 23.4 bits (48), Expect = 2.5
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +1
Query: 475 LLFWYRICQSWGTLAP----RPTIQRTSCWKR 558
L F+Y+IC +G + P +P Q+ S WK+
Sbjct: 14 LSFFYKICNIFGIVPPYSFEKPDSQK-SLWKK 44
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.6 bits (46), Expect = 4.3
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 468 GAAPLLVPYLSELGHTCP 521
GA PL+ P+L+ + H P
Sbjct: 199 GAPPLVSPFLAAMAHRPP 216
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.6 bits (46), Expect = 4.3
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 7/65 (10%)
Frame = +3
Query: 699 VEHIAKEQMQK----MEFPTTF---FTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXIL 857
VEH K+Q M + F T F +L K NLT W + I+
Sbjct: 179 VEHFFKKQFHYIFTYMPYNIVFGLCLTTFGLLPVNGVTSEKCNLTFSWYSKKVFYSKIII 238
Query: 858 LGSIF 872
GSIF
Sbjct: 239 SGSIF 243
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 21.4 bits (43), Expect = 10.0
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -3
Query: 516 KCAPALTDTVPEEERRPDNSTFPA 445
+C ++P P+N TFP+
Sbjct: 81 ECEGRSAGSIPGASSTPENKTFPS 104
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,292
Number of Sequences: 336
Number of extensions: 4925
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25134219
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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