Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M10
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 75 1e-14
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 54 2e-08
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 45 2e-05
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 44 4e-05
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 42 1e-04
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 40 5e-04
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 39 0.001
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 39 0.001
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 38 0.002
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 36 0.008
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 34 0.024
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 34 0.024
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 31 0.17
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 30 0.39
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 2.8
SPBC18E5.10 |||iron sulfur cluster assembly protein |Schizosacch... 27 4.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 6.4
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 75.4 bits (177), Expect = 1e-14
Identities = 48/131 (36%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Frame = +3
Query: 207 TRSEKLSGGQSKRLTVALELVNNPPII-FLDEPTTGLDXXXXXXXXXXXXXXXXXGRTII 383
T L+ Q KR T+ +EL P ++ FLDEPT+GLD G+ I+
Sbjct: 1018 TPGSGLNVEQRKRATIGVELAAKPALLLFLDEPTSGLDSQSAWSIVCFLRKLADAGQAIL 1077
Query: 384 CTIHQPSASLFALFDRVYVMAR-GMCCYQG----AAPLLVPYLSELGHT-CPTTHNPADF 545
CTIHQPSA LF FDR+ ++ + G Y G + L+ Y G CP NPA++
Sbjct: 1078 CTIHQPSAVLFDQFDRLLLLQKGGKTVYFGDIGEHSKTLLNYFESHGAVHCPDDGNPAEY 1137
Query: 546 VLETIITDAEA 578
+L+ I A A
Sbjct: 1138 ILDVIGAGATA 1148
Score = 52.8 bits (121), Expect = 6e-08
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGR-TIICTIHQ 398
+SGG+ KR+T++ P I D T GLD + T T +Q
Sbjct: 309 VSGGERKRVTISEGFATRPTIACWDNSTRGLDSSTAFEFVNVLRTCANELKMTSFVTAYQ 368
Query: 399 PSASLFALFDRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLETIITDAEA 578
S ++ LFDR+ V+ G Y G A Y ++G C DF+ T I+D +A
Sbjct: 369 ASEKIYKLFDRICVLYAGRQIYYGPADKAKQYFLDMGFDCHPRETTPDFL--TAISDPKA 426
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 54.4 bits (125), Expect = 2e-08
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 8/229 (3%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNP-PIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIHQ 398
LS + L++A+EL P I+ LDEP GLD G +I+C++ Q
Sbjct: 899 LSLYHKRLLSIAVELSARPGSILLLDEPANGLDSQSAWMLVCILQKLARSGLSILCSVSQ 958
Query: 399 PSASLFALFDRVYVM-ARGMCCYQGA----APLLVPYLSELGHTCPTTHNPADFVLETII 563
PS+ + LFD + ++ G Y LV Y + T + + ADFVL I
Sbjct: 959 PSSRILELFDMMLILDLNGNTVYYDTMGRDLSKLVNYFKRIHGTNEHSKDTADFVLHCI- 1017
Query: 564 TDAEAAAQMSELCQNGKLCRKLDRMLARGGKKPILHSDESIQRIFVEHIAKEQMQKMEFP 743
+ Q E G K+ I H + + E + + F
Sbjct: 1018 ---QFLKQGPEFDYAGAWAS------TNTHKQIIEHVNFIMDN--PELTDDDFPNETRFM 1066
Query: 744 TTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXILLGSIFF--GIG 884
T+FF Q Y ++ R F+ R+ + L ++A ++ + +++G F+ G+G
Sbjct: 1067 TSFFFQIYKISMRNFVAYWRDSSLLRARVAFNIVAGLIIGFSFYKQGVG 1115
Score = 35.5 bits (78), Expect = 0.010
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 369 GRTIICTIHQPSASLFALFDRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHN 533
G T++ + Q S +F +FD V +M G + G L PY +LG P H+
Sbjct: 269 GTTLVAIVSQASDRIFHMFDMVTLMYEGEQIFYGPTSRLKPYFLDLGF-IPAKHS 322
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 44.8 bits (101), Expect = 2e-05
Identities = 30/87 (34%), Positives = 41/87 (47%)
Frame = +3
Query: 213 SEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTI 392
S+ SGGQ +RL A L+ NP ++ LDE T+ LD T++
Sbjct: 1233 SKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLSC---TVLIIT 1289
Query: 393 HQPSASLFALFDRVYVMARGMCCYQGA 473
HQP SL L DR+ VM G+ G+
Sbjct: 1290 HQP--SLMKLADRIIVMDSGIVKESGS 1314
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+ LSGGQ +R+ +A L+ + I+ LDEPT+ LD
Sbjct: 567 KEASLSGGQQQRIALARALLRDTEILILDEPTSALD 602
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 43.6 bits (98), Expect = 4e-05
Identities = 29/93 (31%), Positives = 42/93 (45%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
+ LSGGQ +R+ +A L+ NP I+ LDE T+ LD GRT +
Sbjct: 1255 KGSSLSGGQKQRIAIARALIRNPKILLLDEATSALD-SHSEKVVQEALNAASQGRTTVAI 1313
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQGAAPLLV 488
H+ S+ A D ++V G+ G LV
Sbjct: 1314 AHRLSSIQDA--DCIFVFDGGVIAEAGTHAELV 1344
Score = 37.5 bits (83), Expect = 0.003
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+SGGQ +R+ +A ++++P I+ LDE T+ LD
Sbjct: 568 MSGGQKQRIAIARAVISDPKILLLDEATSALD 599
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 41.9 bits (94), Expect = 1e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 207 TRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
TR +LSGGQ +R+ +A L+ NP + LDE T+ LD
Sbjct: 615 TRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALD 651
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 39.9 bits (89), Expect = 5e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R KLSGG+ +R+ VA ++ +P II LDE T+ LD
Sbjct: 717 RGLKLSGGEKQRVAVARAILKDPSIILLDEATSALD 752
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LS GQS+R +A +LV P ++ LDEP GLD
Sbjct: 149 LSNGQSRRAMLASKLVQRPQLLLLDEPYAGLD 180
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 195 DHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
D +D +S G + + +V P ++ LDEP G+D
Sbjct: 397 DIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVD 437
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R +SGG+ +RL V+ L+ NP I+F DE T+ LD
Sbjct: 576 RGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALD 611
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 37.9 bits (84), Expect = 0.002
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ ++ +A L NNP ++ LDEPT LD
Sbjct: 911 LSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGG +L +A ++ I+ LDEPT LD
Sbjct: 563 LSGGWKMKLELARAMLQKADILLLDEPTNHLD 594
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ R+ A + NP I+ LDEPT LD
Sbjct: 637 LSGGQKSRVAFACLGLQNPHILILDEPTNHLD 668
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 213 SEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
++ SGG RL++A L P ++ LDEP+ LD
Sbjct: 352 TKTFSGGWRMRLSLARALFCQPDLLLLDEPSNMLD 386
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 34.3 bits (75), Expect = 0.024
Identities = 23/87 (26%), Positives = 36/87 (41%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R+ +LSGG R+ +A L P ++ LDEPT LD G T++ T
Sbjct: 417 RTNELSGGWRMRIALARILFIKPTLMMLDEPTNHLD-LEAVAWLEEYLTHEMEGHTLLIT 475
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
H D +++ + + Y G
Sbjct: 476 CHTQDTLNEVCTDIIHLYHQKLDYYSG 502
Score = 32.3 bits (70), Expect = 0.097
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 219 KLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+LS GQ +R+ A + P I+ LDEPT LD
Sbjct: 712 QLSDGQRRRVLFAFLGMTQPHILLLDEPTNALD 744
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 34.3 bits (75), Expect = 0.024
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGG +L + + NP I+ LDEPT LD
Sbjct: 549 LSGGWKMKLALTRAMFKNPDILLLDEPTNHLD 580
Score = 32.3 bits (70), Expect = 0.097
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +3
Query: 207 TRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+R + LSGGQ +L +A P +I LDEPT LD
Sbjct: 899 SRIKGLSGGQKVKLVLAACTWLRPHVIVLDEPTNYLD 935
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 198 HRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
H+ + LS G R+ A + P I+ LDEPT LD
Sbjct: 505 HQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEPTNHLD 544
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 213 SEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
++ +SGG R+ ++ L P ++ LDEPT LD
Sbjct: 218 TKDMSGGWRMRVALSRALFIKPSLLLLDEPTNHLD 252
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 30.3 bits (65), Expect = 0.39
Identities = 18/87 (20%), Positives = 35/87 (40%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
+ LSGGQ R+++A + + I LD+ + +D RT
Sbjct: 700 KGASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNLFGPEGFLRTHCVV 759
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
+ S ++ D +Y+++ G +G
Sbjct: 760 LTTNSLNVLKEADSIYILSNGKIVEKG 786
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGG+ +R+ + L L + +DEP+ LD
Sbjct: 456 LSGGELQRVAICLALGMPADVYLIDEPSAYLD 487
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGG+ +R +A + DEP++ LD
Sbjct: 220 LSGGELQRFAIAAVATQKADVYMFDEPSSYLD 251
>SPBC18E5.10 |||iron sulfur cluster assembly protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 26.6 bits (56), Expect = 4.8
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +3
Query: 492 YLSELGHTCPTTHNPADFVLETIITDAEAAAQMSELCQN-GKLCRKLDRMLARGGKKPIL 668
Y + HTCP + + V+ET+ + A +S+L K + G +
Sbjct: 372 YSTNTCHTCPVCRDGVEDVIETLKGLKDGHAHLSQLKDMFSKFNMPSSSKVFCGFGDSMR 431
Query: 669 HSDESIQRIFVEHI 710
H SIQR F + I
Sbjct: 432 HQIHSIQRNFPDQI 445
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -2
Query: 403 EGWCIVHMIVLPCLDNSRKSTTSCRIDTMSKPVVGSSRNMMGGLLTSSSATVRRF 239
E + ++++ PCL +S S SC M+ +++ G TS+ A +RF
Sbjct: 58 EYYTVIYLYGSPCLTSSPTSPDSCTFGNMTFQWTSLLQDVFSG--TSAFAIFKRF 110
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,952,191
Number of Sequences: 5004
Number of extensions: 84784
Number of successful extensions: 297
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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