Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M10
(902 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 3e-30
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 91 9e-19
SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08) 87 2e-17
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 9e-16
SB_59776| Best HMM Match : ABC_tran (HMM E-Value=0.00016) 74 1e-13
SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0) 62 8e-10
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 56 3e-08
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 56 3e-08
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 50 2e-06
SB_40434| Best HMM Match : ABC2_membrane (HMM E-Value=0.0087) 45 7e-05
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41) 44 2e-04
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 44 2e-04
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 42 5e-04
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 41 0.002
SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042) 39 0.005
SB_37816| Best HMM Match : ABC_tran (HMM E-Value=0.03) 38 0.011
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_16851| Best HMM Match : ABC_tran (HMM E-Value=6.1e-05) 35 0.078
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 34 0.14
SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0) 34 0.18
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.24
SB_42079| Best HMM Match : L_lactis_RepB_C (HMM E-Value=0.16) 33 0.32
SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 32 0.73
SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 31 0.96
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8) 31 1.3
SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 31 1.7
SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9) 31 1.7
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42) 30 2.9
SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11) 30 2.9
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.9
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.9
SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.9
SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0) 29 3.9
SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07) 29 3.9
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.9
SB_53560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_35965| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 29 6.8
SB_28740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_5904| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_35180| Best HMM Match : DUF795 (HMM E-Value=2.1) 29 6.8
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 29 6.8
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 28 9.0
SB_10640| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_26155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 815
Score = 129 bits (312), Expect = 3e-30
Identities = 62/139 (44%), Positives = 82/139 (58%)
Frame = +3
Query: 15 RDMRVFKKLSSYIMQDDLLQPRLTVQESMWIAADXXXXXXXXXXXXXXXXXXXXXXXXXW 194
R++R F+K+S YIMQDD+L P LTV ESM ++A+
Sbjct: 191 RNLRQFRKMSCYIMQDDVLLPHLTVMESMMVSANLHLKENMPLDDKERLIKEILINLGLL 250
Query: 195 DHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGR 374
+ DTR ++SGGQ KR+ +ALEL+NNPP+IFLDEPT+GLD GR
Sbjct: 251 ETADTRLSEVSGGQRKRVAIALELINNPPLIFLDEPTSGLDSSSAYQCISLMRTLAHGGR 310
Query: 375 TIICTIHQPSASLFALFDR 431
T++CTIHQPSA LF +FD+
Sbjct: 311 TVVCTIHQPSAKLFEMFDK 329
Score = 54.8 bits (126), Expect = 9e-08
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 13/187 (6%)
Frame = +3
Query: 369 GRTIICTIHQPSASLFALFD--RVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPAD 542
GR I+ Q SAS F R++ A G C +QG LVP++S G CP HNPAD
Sbjct: 394 GRAILA--RQCSASSSHAFHELRLFECAEGNCLFQGPVAQLVPHMSREGLECPKYHNPAD 451
Query: 543 FVLETIITD-AEAAAQMSELCQNGKLCRKLDRMLARGGKKPILHSDESIQRIFVEHIA-- 713
F++E + E + + + R + D S+ + +A
Sbjct: 452 FIIEVAAGEYGEDVIPKLVKAWHVHMAEEKRRKSLEMSPGSDVSGDSSVSKSSTVTVATG 511
Query: 714 ------KEQMQKMEF--PTTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXILLGSI 869
K + + + TQF +L KR F R+ +++ +L+G +
Sbjct: 512 GCNLSTKTSTESLGIIHAASQTTQFVVLFKRAFQSILRDRVFTHLRVVSIAAVGLLIGLL 571
Query: 870 FFGIGND 890
+ GIGND
Sbjct: 572 YLGIGND 578
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 91.5 bits (217), Expect = 9e-19
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 7/188 (3%)
Frame = +3
Query: 18 DMRVFKKLSSYIMQDDLLQPRLTVQESMWIAADXXXXXXXXXXXXXXXXXXXXXXXXXWD 197
D+ +++ ++ ++ Q+D++ LTV+E + A+
Sbjct: 265 DLDMYRTITGFVPQEDVMHRNLTVKEVLRYQAELRLSSIVKKAMKEERIHQIIELLELER 324
Query: 198 HRDTR-----SEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXX 362
+D++ + +SGGQ KR+ + +ELV +P ++FLDEPT+GLD
Sbjct: 325 IQDSQIGDETNRGISGGQRKRVNIGMELVVDPTLLFLDEPTSGLDSTSSLSVLNALRAVA 384
Query: 363 XXGR-TIICTIHQPSASLFALF-DRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNP 536
GR TI+C IHQP +F +F + +++ G +QG+ Y LG P NP
Sbjct: 385 ERGRLTIVCVIHQPRFEIFRMFHNLLFLGPGGRTVFQGSVDKAEEYFQRLGFEKPLNVNP 444
Query: 537 ADFVLETI 560
ADF ++ I
Sbjct: 445 ADFYMDVI 452
>SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08)
Length = 771
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +3
Query: 204 DTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGR-TI 380
D + +SGGQ KR+ + +ELV +P ++FLDEPT+GLD GR TI
Sbjct: 306 DEENRGISGGQRKRVNIGMELVVDPTLLFLDEPTSGLDSTSSLSVLNALRAVAEKGRLTI 365
Query: 381 ICTIHQPSASLFALF-DRVYVMARGMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLET 557
+C IHQP +F +F + +++ G +QG+ Y LG P NPADF ++
Sbjct: 366 VCVIHQPRFEIFRMFHNLLFLGPGGRTVFQGSVDEAEEYFQCLGFEKPLNVNPADFYMDV 425
Query: 558 I 560
I
Sbjct: 426 I 426
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 81.4 bits (192), Expect = 9e-16
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = +3
Query: 39 LSSYIMQDDLLQPRLTVQESMWIAADXXXXXXXXXXXXXXXXXXXXXXXXXWDHRDT--- 209
+S+Y+ Q+DL +LTV+E + A DT
Sbjct: 268 ISAYVQQEDLFIGKLTVREHLVFQALLRLDKDLSLQERLYRVDQIIGEVGLRRCADTMIG 327
Query: 210 ---RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTI 380
R +SGG+ KRL+ A E++ +P I+F DEPT+GLD GRT+
Sbjct: 328 IPGRMRGISGGEKKRLSFASEVLTDPAILFADEPTSGLDAFMAQTVITTLQKMAAQGRTV 387
Query: 381 ICTIHQPSASLFALFDR 431
+CTIHQPS+ +FA+FDR
Sbjct: 388 VCTIHQPSSEVFAMFDR 404
>SB_59776| Best HMM Match : ABC_tran (HMM E-Value=0.00016)
Length = 113
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R +SGG+ KRL+ A E++ P I+F DEPT+GLD GRTIICT
Sbjct: 40 RVRGISGGEQKRLSFASEILTGPSILFADEPTSGLDSFMAQSVVATLQKLAAQGRTIICT 99
Query: 390 IHQPSASLFALFDR 431
IHQPS+ ++ +F R
Sbjct: 100 IHQPSSEVYNMFSR 113
>SB_15716| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 61.7 bits (143), Expect = 8e-10
Identities = 32/85 (37%), Positives = 45/85 (52%)
Frame = +3
Query: 198 HRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRT 377
++D + K SGG ++L+ A+ LV NP I+F+DEPTTG+D GRT
Sbjct: 1484 YQDVCAGKYSGGNKRKLSTAIALVGNPAIVFMDEPTTGMDPKARRFLWNIITGIMKEGRT 1543
Query: 378 IICTIHQPSASLFALFDRVYVMARG 452
+I T H AL +RV +M G
Sbjct: 1544 VILTSHS-MEECEALCNRVAIMVNG 1567
Score = 44.8 bits (101), Expect = 1e-04
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +3
Query: 201 RDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTI 380
R S LSGG ++L+VA+ V ++ LDEPT G+D +
Sbjct: 436 RHELSANLSGGMKRKLSVAMAFVAESRVVILDEPTAGVDPYARRSIWDLLLKYKKDRTVL 495
Query: 381 ICTIHQPSASLFALFDRVYVMARG--MCC 461
+ T H A + L DR+ ++++G CC
Sbjct: 496 LSTHHMDEADV--LGDRIAIISQGKLQCC 522
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +3
Query: 195 DHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGR 374
D R +S +LSGG ++L A+ LV +FLDEPT+G+D G+
Sbjct: 324 DKRKAKSSELSGGMKRKLNCAIALVGGSETVFLDEPTSGMD-PYARRATWDLLLKHKAGK 382
Query: 375 TIICTIHQPSASLFALFDRVYVMARGM--CC 461
T+I T H + F L DR+ +MA G CC
Sbjct: 383 TVILTTHFMDEADF-LGDRIAIMADGQLRCC 412
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/76 (38%), Positives = 39/76 (51%)
Frame = +3
Query: 225 SGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIHQPS 404
SGG ++L+ A+ LV +PP++FLDEPTTG+D GR II T H
Sbjct: 1453 SGGNKRKLSTAIALVGDPPVVFLDEPTTGMDPVARRLLWDALSRVRAEGRCIIITSHS-M 1511
Query: 405 ASLFALFDRVYVMARG 452
AL R+ +M G
Sbjct: 1512 EECDALCTRLAIMVNG 1527
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +3
Query: 282 IIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIH-QPSASLFALFDRVYVMARG-- 452
++ LDEPT+G+D RTI+ T H A L L DR+ +MA G
Sbjct: 540 VVMLDEPTSGMDPSARRFTWELLQQERQH-RTILLTTHFMDEADL--LGDRIAIMAEGHI 596
Query: 453 MCC 461
CC
Sbjct: 597 KCC 599
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 50.4 bits (115), Expect = 2e-06
Identities = 19/41 (46%), Positives = 32/41 (78%)
Frame = +3
Query: 195 DHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+ +D ++ LSGGQ ++L+V + LV +P ++FLDEPT+G+D
Sbjct: 621 EKKDDIAKNLSGGQKRKLSVGISLVGDPKVLFLDEPTSGMD 661
>SB_40434| Best HMM Match : ABC2_membrane (HMM E-Value=0.0087)
Length = 405
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 309 GLDXXXXXXXXXXXXXXXXXGR-TIICTIHQPSASLFALFDRVYVMARG-MCCYQGAAPL 482
GLD G+ T+IC IHQP +F +V + G +QG
Sbjct: 2 GLDSTSSLLVLDALRAVAEKGKLTVICVIHQPRFEIFDRMHKVLFLGPGGRTVFQGTVDE 61
Query: 483 LVPYLSELGHTCPTTHNPADFVLETI 560
+ Y S L P NPADF ++ I
Sbjct: 62 SMAYFSSLNLRMPANVNPADFFMDVI 87
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 44.8 bits (101), Expect = 1e-04
Identities = 28/88 (31%), Positives = 41/88 (46%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R + LSGGQ +R+ +A ++ NP I+ LDE T+ LD GRT+I
Sbjct: 1186 RGQMLSGGQRQRIAIARAILKNPKILLLDEATSALD-SESEHLVQEALERLMKGRTVITI 1244
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQGA 473
H+ S A D + V+ G G+
Sbjct: 1245 AHRLSTIKNA--DNIVVLDGGSIVESGS 1270
>SB_52342| Best HMM Match : ABC_tran (HMM E-Value=5.29999e-41)
Length = 336
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R KLSGG+ +R+ +A ++ NPP++ LDE T+ LD
Sbjct: 275 RGLKLSGGEKQRVAIARTVLKNPPVVLLDEATSALD 310
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+SGGQ +R+ +A L+ NPPI+ LDE T+ LD
Sbjct: 808 ISGGQKQRIAIARALIRNPPILLLDEATSALD 839
Score = 41.9 bits (94), Expect = 7e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R ++SGGQ +R+ +A LV NP ++ LDE T+ LD
Sbjct: 252 RGAQMSGGQKQRIAIARALVKNPTLLILDEATSALD 287
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Frame = +3
Query: 219 KLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIHQ 398
+LSGGQ +R+ +A L+ NP I+ LDE T+ LD G T++ H+
Sbjct: 492 QLSGGQKQRIAIARALIRNPKILLLDEATSALD-AESEHLVQDAIYKNLQGHTVLIIAHR 550
Query: 399 PS----ASLFALFDRVYVMARGMCCYQGAAPLLVPYLSE---LGHTCPTT 527
S A L + D+ V G + A L L + +GH PT+
Sbjct: 551 LSTIEKADLIIVIDKGQVAEIGTYSHLIAKDGLFNRLVQRQLVGHAAPTS 600
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/65 (35%), Positives = 32/65 (49%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
+ +LSGGQ +R+ +A LV NP I+ LDE T+ LD GRT +
Sbjct: 769 QGSQLSGGQKQRVAIARALVRNPRILILDEATSALD-TESERVVQAALDKAREGRTTLVI 827
Query: 390 IHQPS 404
H+ S
Sbjct: 828 AHRLS 832
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 201 RDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTI 380
R+ E LSGG ++L+VA+ V + LDEPT G+D GRTI
Sbjct: 600 RNCAVETLSGGMKRKLSVAMAFVAGSRTVILDEPTAGVD-PYARRAIWDLLIKYKKGRTI 658
Query: 381 ICTIH-QPSASLFALFDRVYVMARG 452
+ + H A + L DR+ +++ G
Sbjct: 659 LLSTHFMEEADI--LGDRIAIISSG 681
>SB_25545| Best HMM Match : ABC_tran (HMM E-Value=0.00042)
Length = 146
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 201 RDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R S LSGG ++L+VA+ V ++ LDEPT G+D
Sbjct: 91 RHELSANLSGGMKRKLSVAMAFVAESRVVILDEPTAGVD 129
>SB_37816| Best HMM Match : ABC_tran (HMM E-Value=0.03)
Length = 73
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIH 395
LS G+++R+ +A LV+ P + LDEP GLD G T++ H
Sbjct: 4 LSTGEARRVLIARALVHRPRALLLDEPCAGLDPATRRQFLEALRDVARSGVTLVLVTH 61
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 36.3 bits (80), Expect = 0.034
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 195 DHRDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+ D +LSGGQ +R+ +A L +P + DEPT+ LD
Sbjct: 148 EQADKYPSQLSGGQQQRVAIARALCMDPIAMLFDEPTSALD 188
>SB_16851| Best HMM Match : ABC_tran (HMM E-Value=6.1e-05)
Length = 113
Score = 35.1 bits (77), Expect = 0.078
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 201 RDTRSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
+ T+++ SGG R+++A L P I+ LDEPT LD
Sbjct: 62 QQTQTKDFSGGWRMRISLARALFVRPTILLLDEPTNHLD 100
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 34.3 bits (75), Expect = 0.14
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R LSGGQ +R+++A L + + LD+P + +D G++++
Sbjct: 162 RGINLSGGQKQRISLARALYADKDLYLLDDPLSAVDAHVGQHIFKHCIKGSLWGKSVLFA 221
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
HQ + D+V M G +G
Sbjct: 222 THQ--LQYLSQCDQVLYMNNGRIAERG 246
>SB_5376| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1705
Score = 33.9 bits (74), Expect = 0.18
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 742 GNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
G +C+C+L T +LC D +EC P
Sbjct: 844 GGQFYCVCNLGYSGTGVLCADINECDASTLAP 875
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPPLAN 638
NC N G S +C C+ ++C+D +EC P N
Sbjct: 358 NCT-NTKG-SFYCTCNTGYSGDGVICVDINECNTDALAPYHN 397
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECK 665
NC N G S +C C ++CID +ECK
Sbjct: 1350 NCT-NTKG-SFYCTCHTGYSGNGVICIDINECK 1380
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
NC N G S +C C + + C+D +ECK P
Sbjct: 1500 NCT-NTKG-SFYCTCHVGYSGNGVTCVDINECKTTALAP 1536
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECK 665
NC N G S FC C + + C+D +EC+
Sbjct: 1100 NCT-NTKG-SFFCTCHVGYSGDGVTCVDINECR 1130
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKI 662
NC N G S +C C + ++C+D EC I
Sbjct: 1550 NCT-NTKG-SFYCTCQVGYSGYGVMCVDIDECAI 1581
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 33.5 bits (73), Expect = 0.24
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTII-CTIHQ 398
LSGGQ R+ +A + N I LD+P +D +T+I CT H
Sbjct: 190 LSGGQKARVGLARAVYQNKSIYLLDDPLAAVDAHVAAHLYKHCITGLLRHKTVILCTHHT 249
Query: 399 PSAS----LFALFDRVYVMARG 452
S +F LF R ++ A G
Sbjct: 250 KFLSGADHVFTLF-RAFLFAYG 270
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 33.5 bits (73), Expect = 0.24
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ R+ A + P ++ LDEPT LD
Sbjct: 457 LSGGQKSRVVFASMTMGGPNLLVLDEPTNHLD 488
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 33.5 bits (73), Expect = 0.24
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R LSGGQ RL++A + + I LD+P + +D + I
Sbjct: 550 RGVSLSGGQRSRLSLARAVYSGADIFLLDDPLSAVDTQVGQHIFDKCICGELKSKLRILA 609
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
HQ A D V ++ +G QG
Sbjct: 610 THQ--AQHLPRADHVMILDKGRVATQG 634
>SB_42079| Best HMM Match : L_lactis_RepB_C (HMM E-Value=0.16)
Length = 641
Score = 33.1 bits (72), Expect = 0.32
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 207 TRSEKLSGGQSKRLTVALELVNNPPIIFLDE 299
T + SGG ++L+ A+ L+ +PPIIFL +
Sbjct: 16 TPCKTYSGGNKRKLSTAIALIGDPPIIFLKQ 46
>SB_38753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 32.3 bits (70), Expect = 0.55
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 231 GQSKRLTVALELVNNPPIIFLDEPTTGLD 317
GQ R+ A ++NP ++ LDEPT LD
Sbjct: 448 GQKSRVAFADMALSNPDVVILDEPTNNLD 476
>SB_49244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 31.9 bits (69), Expect = 0.73
Identities = 25/89 (28%), Positives = 41/89 (46%)
Frame = +1
Query: 361 QDKEELSYAQYTSPRLLCSLSSTECM*WRGECAVIRAPLLFWYRICQSWGTLAPRPTIQR 540
Q E ++ +T PRL +EC+ GE ++ P +W+ S L T+QR
Sbjct: 245 QSSEPFTWWAHTQPRLRADRRPSECVQKPGE--ILYIPSGWWW----SHINLEDTITLQR 298
Query: 541 TSCWKRSSPTRKQRLRCQSCARMENFAGN 627
C +RS L+ QS +N++G+
Sbjct: 299 WFCDRRSLRACLDELKEQSDTSPKNYSGD 327
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 31.9 bits (69), Expect = 0.73
Identities = 22/81 (27%), Positives = 32/81 (39%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R LSGGQ R+++A + + I LD+P + LD + I
Sbjct: 688 RGASLSGGQQSRVSLARAVYADVEIYLLDDPFSSLDSKVGQDIFNECIQRALSNKLKILV 747
Query: 390 IHQPSASLFALFDRVYVMARG 452
HQ F D V ++RG
Sbjct: 748 THQ--IKYFNFADCVIFLSRG 766
>SB_31500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1446
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -1
Query: 527 GRGASVPQL*QIRYQKRSGALITAHSPRHHIHSVEESEQRSRGLVYCAYDSSSLS*Q*PQ 348
G G+S P+ R S ++ H + HS +E E R R ++DSS+ S +
Sbjct: 1275 GSGSSTPRAALSRSHAMSDTRMSYHYRQGSSHSADEREFRRRHASQQSFDSSTHSHPLSR 1334
Query: 347 KHYQLS 330
KH+++S
Sbjct: 1335 KHHRVS 1340
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 31.5 bits (68), Expect = 0.96
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+T+A + ++ I LD+P + +D
Sbjct: 248 RGVALSGGQKARVTLARAVYSDADIYLLDDPLSAVD 283
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/83 (27%), Positives = 33/83 (39%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICTIHQP 401
LSGGQ R+ +A L + I LD+P + +D +T + HQ
Sbjct: 538 LSGGQRTRIGLARALYADADIYLLDDPLSSVDAKVGRHIFDECVCGILKDKTRVLVTHQL 597
Query: 402 SASLFALFDRVYVMARGMCCYQG 470
A D V VM G ++G
Sbjct: 598 QYLKGA--DHVVVMNAGSVAFEG 618
>SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8)
Length = 640
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 268 STIRPSYFWMS--LPQAWTSCRYDN---W*CFCGYCQDKEELSYAQYTSPRLLCSLSSTE 432
S++RP + +S LP+ C+Y C C Q E SY Y +CS +S E
Sbjct: 139 SSLRPQHVLLSSELPRNVCLCQYHENIKLICDCLSKQITEFPSYTGYFVDNFVCSANSEE 198
Query: 433 CM*WRGECA 459
CM G+C+
Sbjct: 199 CM--HGKCS 205
>SB_3746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/87 (25%), Positives = 34/87 (39%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R LSGGQ R+ +A + + I LD+P + +D + I
Sbjct: 193 RGASLSGGQKARVNLARAVYADGDIYLLDDPLSAVDAKVGKHIFENCITGVLENKIRILV 252
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
HQ A D + +M RG ++G
Sbjct: 253 THQLQHLKNA--DYIMIMDRGAISHEG 277
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A + + +I LD+P + +D
Sbjct: 267 RGMTLSGGQCSRISLARAVYSRASVILLDDPLSRVD 302
>SB_24110| Best HMM Match : Metallothionein (HMM E-Value=1.9)
Length = 237
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +1
Query: 322 CRYDNW*CFCG--YCQDKEELSYAQYTSPRLLCSLSSTECM*WRGECAVIRAPLLFWYRI 495
C Y C C YC T +C+ ST C W CA W +
Sbjct: 168 CIYQVEYCMCQVEYCMSVCAKLSTVCTKWSTVCTKWSTVCTKWSTVCAKCSTVYAKWSTV 227
Query: 496 CQSWGTLAPR 525
C W T+ +
Sbjct: 228 CAKWSTVCTK 237
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 744 TTFFTQFYILTKRMFIQNKRNLTTLWIQLAHHLTSXILLGSIFFGI 881
T+F+TQF +LT+R F Q+K + + + I++G I+F I
Sbjct: 131 TSFWTQFTVLTERTFKQSKPEILSK-LNFIQTFVLSIIVGLIWFRI 175
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ +R+ +A + N + LD+P + +D
Sbjct: 667 RGINLSGGQKQRVNLARAVYFNADVYLLDDPLSAVD 702
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 793 CMNILFVRI*NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKI 662
C N+L + C+K GN CI L N C ++SECK+
Sbjct: 312 CTNVLGSFVCRCLKGFEGNGKTCIPKL-QTECNPACGNNSECKM 354
>SB_42213| Best HMM Match : ABC_tran (HMM E-Value=4.30058e-42)
Length = 1264
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A + ++ ++ LD+P + +D
Sbjct: 679 RGISLSGGQRSRVSLARAVYSDCDVLLLDDPLSAVD 714
>SB_52373| Best HMM Match : ABC_tran (HMM E-Value=3.4e-11)
Length = 406
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A L + I LD+P + LD
Sbjct: 193 RGVALSGGQRARVSLARALYLDADIYVLDDPLSALD 228
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A + ++ I +D+P + +D
Sbjct: 600 RGVSLSGGQRSRVSLARAVYSDADIFLMDDPLSAVD 635
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ R+ +A + + I+ LD+P + +D
Sbjct: 154 LSGGQKARINLARAVYYDADIVLLDDPLSAVD 185
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 29.5 bits (63), Expect = 3.9
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLDXXXXXXXXXXXXXXXXXGRTIICT 389
R LSGGQ R+++A + + I LD+P + +D + I
Sbjct: 578 RGVSLSGGQRARVSLARAVYADADIYLLDDPLSAVDAKVGSHLFKECICGALTNKVRILV 637
Query: 390 IHQPSASLFALFDRVYVMARGMCCYQG 470
HQ A D + V++ G +G
Sbjct: 638 THQLQYLKHA--DSIIVLSDGKIAQKG 662
>SB_21661| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1202
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
NC N G S +C C + + C+D +ECK P
Sbjct: 456 NCT-NTKG-SFYCTCHVGYSGDGVTCVDINECKTTALAP 492
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
NC N G S FC C + + C+D +EC+ P
Sbjct: 780 NCT-NTKG-SFFCTCHVGYSGDGVTCVDINECRSDALAP 816
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKI 662
NC N G S +C C + ++C+D EC I
Sbjct: 26 NCT-NTKG-SFYCTCQVGYSGYGVMCVDIDECAI 57
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECK 665
NC N G S +C C + + C+D +ECK
Sbjct: 262 NCT-NTKG-SFYCTCHVGYSGDGVTCVDINECK 292
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
NC N G S +C C + + C+D +ECK P
Sbjct: 406 NCT-NTKG-SFYCTCHVGYSGDGVACLDINECKTTALAP 442
>SB_58882| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1027
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 763 NCVKNVVGNSIFCICSLAMCSTNILCIDSSECKIGFFPP 647
NC N G S FC C + + C+D +EC+ P
Sbjct: 194 NCT-NTKG-SFFCTCHVGYSGDGVTCVDINECRSDALAP 230
>SB_44626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ +R+ +A + N + LD+P + +D
Sbjct: 4 LSGGQKQRVNLARAVYFNADVYLLDDPLSAVD 35
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ +R+ +A + N + LD+P + +D
Sbjct: 400 LSGGQKQRVNLARAVYFNADVYLLDDPLSAVD 431
>SB_23783| Best HMM Match : ABC_tran (HMM E-Value=6.7e-07)
Length = 210
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 222 LSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
LSGGQ +R+ +A + N + LD+P + +D
Sbjct: 102 LSGGQKQRVNLARAVYFNADVYLLDDPLSAVD 133
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A L + I LD+P + LD
Sbjct: 901 RGIALSGGQRARVSLARALYLDADIYVLDDPLSALD 936
>SB_53560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +3
Query: 612 KLCRKLDRMLARGGKKPI---LHSDESIQRIFVEHIAKE 719
K CRK+DR +R K I L+ I+R F HIAKE
Sbjct: 141 KSCRKMDREPSRLPVKRICRLLNMSRKIRRTFRNHIAKE 179
>SB_35965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 504 LGHTCPTTHNPADFVLETI 560
LG+ CP +NPAD+ + T+
Sbjct: 2 LGYPCPPNYNPADYFVHTL 20
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A + + I LD+P + +D
Sbjct: 471 RGVSLSGGQRARISLARAVYADGDIYLLDDPLSAVD 506
>SB_28740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 35
Score = 28.7 bits (61), Expect = 6.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 504 LGHTCPTTHNPADFVLETI 560
LG+ CP +NPAD+ + T+
Sbjct: 2 LGYPCPPNYNPADYFVHTL 20
>SB_5904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 367
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +3
Query: 450 GMCCYQGAAPLLVPYLSELGHTCPTTHNPADFVLETI 560
G +QG + Y S L P NPADF ++ I
Sbjct: 13 GRTVFQGTVDESMAYFSSLNLRMPANVNPADFFMDVI 49
>SB_35180| Best HMM Match : DUF795 (HMM E-Value=2.1)
Length = 388
Score = 28.7 bits (61), Expect = 6.8
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 548 AGNDHHRRGSSGSDVRAVPEWKTLQE-TGQDVSERWKETNFTFRRVNTKDIRRAHSQRTN 724
+G HH GS AV ++ LQ+ G D++ +R +T+ ++R +TN
Sbjct: 293 SGRQHH--GSPQVCACAV-QFAYLQDYDGSDITSELSICVVLYRESSTRTLKRFVKFKTN 349
Query: 725 AEDGIPDHVFHAILYPNEKDVHTKQKK 805
+ DHV ++ N+K +T+ K
Sbjct: 350 KGITLRDHVTFFVVNSNQKHRNTELTK 376
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 210 RSEKLSGGQSKRLTVALELVNNPPIIFLDEPTTGLD 317
R LSGGQ R+++A + + I LD+P + +D
Sbjct: 140 RGVSLSGGQRARISLARAVYADGDIYLLDDPLSAVD 175
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +2
Query: 683 NTKDIRRAHSQRTNAEDGIPDHVFHAILYPNEKDVHTKQKKFDHSLDTVGAPSNFXHSSW 862
+T R H TN DH + + Y E D +T + DH +T+ ++
Sbjct: 377 DTNTSRYGHDHDTNTLRYGHDHDTNTLRYEQEHDTNTSRYGHDHDTNTLRYGHEHDTNTS 436
Query: 863 KYILRHWKRR 892
+Y H +R
Sbjct: 437 RYEHEHTTKR 446
>SB_10640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.3 bits (60), Expect = 9.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 457 AVIRAPLLFWYRICQSWGTLAPRPTIQRTSCW 552
A + APL +Y +WG LAPR I T W
Sbjct: 722 AALVAPL--YYAAATTWGCLAPRAAIMLTIPW 751
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,507,195
Number of Sequences: 59808
Number of extensions: 672396
Number of successful extensions: 2154
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 1785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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