Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M05
(842 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35) 149 4e-36
SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23) 124 1e-28
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07) 56 5e-08
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 54 1e-07
SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12) 50 2e-06
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 49 4e-06
SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024) 44 1e-04
SB_14141| Best HMM Match : HH_signal (HMM E-Value=0) 44 2e-04
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 42 6e-04
SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.095
SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14) 32 0.51
SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.67
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2) 29 4.7
SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4) 29 6.2
SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17) 28 8.2
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 28 8.2
>SB_24829| Best HMM Match : Gelsolin (HMM E-Value=5.8e-35)
Length = 1078
Score = 149 bits (360), Expect = 4e-36
Identities = 87/228 (38%), Positives = 131/228 (57%), Gaps = 4/228 (1%)
Frame = +1
Query: 148 DKNA-RDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDS 324
+KN R+ A A+ N G G+QIWRI+ F+ +++D G FY GDSYIIL T +S
Sbjct: 455 EKNVKREAAATEIAWKNAGTREGLQIWRIEKFKVKVWSREDYGSFYDGDSYIILNTYKES 514
Query: 325 -RNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 501
+ L +D+H+WIG++STQDE G AA TV LD +QHRE G ES LF SYF++
Sbjct: 515 GEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIHLNDKPIQHREVQGFESKLFKSYFKS 574
Query: 502 PLTYLEGGNPSGFNHVVTNAGAQKRMFQVKGK--RDVRVRQVDPQIASMNKGDCFVLSLD 675
LT L+GG SGF HV + R+ +V+G + V +V +S+ D F+L
Sbjct: 575 -LTILKGGVDSGFRHVKPQE-YKPRLLRVRGTTVSNCVVEEVLLARSSLCSEDVFILDKG 632
Query: 676 NDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVDKYSSDVD 819
++Y++VG K EK + + +++ + +G+ K ++ D+ S D
Sbjct: 633 LNLYLWVGVKCDKDEKFRGMQEILKIK-SERNGKPKSEVNDESSMKPD 679
Score = 79.4 bits (187), Expect = 3e-15
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Frame = +1
Query: 253 VAQKDIGKFYKGDSYIILRTTSD-SRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKF 429
V + D GKFY GDSYIIL T D + L +D+H+WIG++STQDE G AA TV LD
Sbjct: 880 VLRDDYGKFYDGDSYIILNTYKDPEEDELKYDVHFWIGKDSTQDEYGTAAYKTVELDIYP 939
Query: 430 GGAAVQH----RETMGHESALFLSYFQTPLTYLEGGNPSGFNHV---VTNAGAQKRMFQV 588
V+ R+++ + L + T + G+ F V V++A Q ++ ++
Sbjct: 940 KSVKVEEVPFVRKSLNSDDVFILDKGK---TIYQKGDYDDFEPVLLRVSDASGQMKLTEM 996
Query: 589 KGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDH 768
K K R+ + D ++ D F+ N ++V+ G KA E+ A+ + +
Sbjct: 997 K-KGKGRITRND-----FDEKDVFLFDTGNVLFVYSGNKASIDERRLALQIGTNYLNGTN 1050
Query: 769 H 771
H
Sbjct: 1051 H 1051
>SB_24828| Best HMM Match : Peptidase_A17 (HMM E-Value=1.7e-23)
Length = 1531
Score = 124 bits (298), Expect = 1e-28
Identities = 65/159 (40%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Frame = +1
Query: 133 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 312
++ ++ + + A+ A+ N G G+QIWRI F+ ++ G+FY GDSYIIL T
Sbjct: 496 LSEVTHEVKKSAAEGEVAWKNAGEKVGLQIWRINKFKVEEWPKEKYGQFYAGDSYIILWT 555
Query: 313 TSDSRNN--LSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFL 486
+ + L +D+H+WIGR STQDE G AA TV LD VQHRE M HES +F
Sbjct: 556 YEEKEDTEKLCYDLHFWIGRGSTQDEYGTAAYKTVELDTYLNDVPVQHREIMNHESDMFK 615
Query: 487 SYFQTPLTYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRD 603
+YF++ +TYL+GG +GFN V + R+ +V G ++
Sbjct: 616 TYFKS-ITYLKGGAETGFNQVKPKE-YKPRILKVSGDKN 652
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 56.0 bits (129), Expect = 4e-08
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 619 VDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVD 798
V+ S+NKGD F+L +IY + G + VE++K I A ++RD++ GR +V I+D
Sbjct: 48 VELHYKSLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIID 107
Query: 799 KYSSDVDVXKFFTA 840
+ KFF A
Sbjct: 108 ECKDKGLESKFFDA 121
Score = 51.2 bits (117), Expect = 1e-06
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Frame = +1
Query: 175 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWD--- 345
V AF G+ G++IWRI+ + + K G FY GDSYI L ++ D
Sbjct: 3 VDDAFVQAGQKPGLEIWRIEKLKVVAQDPKTYGTFYSGDSYICLSVELHYKSLNKGDVFI 62
Query: 346 ------IHYWIGRESTQDESGAAAILTVGL-DDKFGGAAVQHRETMGHESALFLSYFQTP 504
I+ W G + ++ E + + D++ GG A H + L +F
Sbjct: 63 LDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKDKGLESKFFDAL 122
Query: 505 LTYLEGGNPSGFNHVV---TNAGAQKRMFQVKGKRDVRVRQVDP-QIASMNKGDCFVLSL 672
+ E G + A + M G+ ++R + P + ++++ DCF+L
Sbjct: 123 GSRGEIAEDLGTTRSLRKPARAPSLSTMSDASGELEMREIEAKPLKKSNLDTNDCFILDC 182
Query: 673 -DNDIYVFVGEKAKNVEKLKAI 735
+ ++V+VG+ EK A+
Sbjct: 183 GSSGVFVWVGKGCTKNEKSAAM 204
>SB_14143| Best HMM Match : Gelsolin (HMM E-Value=1.1e-07)
Length = 546
Score = 55.6 bits (128), Expect = 5e-08
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 199 GRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQ 378
GR+ V +R+ + + G F+ GDSY+++ T R I++W G +S
Sbjct: 155 GRSKEVGFYRVTDGGKVQCNTAAKGIFFSGDSYLVVYTYRTQRGQKKSIIYFWKGNDSRV 214
Query: 379 DESGAAAILTVGLD-DKFGGAAVQ 447
E GAAA LTV LD + FGG AVQ
Sbjct: 215 FEKGAAAKLTVDLDNNNFGGDAVQ 238
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +1
Query: 148 DKNAR-DKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 312
+KN + + A+ PA+ G+ GVQ+WRI F+ ++D G FY GDSYI+L T
Sbjct: 347 EKNVKKESAEGEPAWEGAGKEVGVQVWRIVKFKVTHWPKQDYGHFYNGDSYIVLNT 402
>SB_14633| Best HMM Match : LRR_1 (HMM E-Value=3.4e-12)
Length = 446
Score = 50.4 bits (115), Expect = 2e-06
Identities = 38/134 (28%), Positives = 60/134 (44%)
Frame = +1
Query: 304 LRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALF 483
L+T D + L W I+YWIG+E++ RE G ES F
Sbjct: 260 LKTELDETDQLFWQIYYWIGKEAS-------------------------REEQGDESEEF 294
Query: 484 LSYFQTPLTYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDCFV 663
F + Y+EGG SGF + V + R+F++ + V + V P ++S++ F+
Sbjct: 295 HELFDNDIAYIEGGTASGF-YSVEDQIYITRLFRLLKDKRVLLEPVLPDVSSLDPTFTFI 353
Query: 664 LSLDNDIYVFVGEK 705
L IY++ G K
Sbjct: 354 LDAGLKIYIWSGAK 367
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 49.2 bits (112), Expect = 4e-06
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +1
Query: 592 GKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQV---RDQ 762
G+R+++ R ++P S N GDC+VL ++++ +VG+ A +E+ K A+++ R+
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAKVTEIASRIFTKREL 1516
Query: 763 DHHGRGKVDIVDKYSSDVD 819
D R V V++ S D D
Sbjct: 1517 DCKARDIV-FVEEKSQDED 1534
Score = 41.9 bits (94), Expect = 6e-04
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 16/96 (16%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDSRNNLSWDI 348
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 1769 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 1828
Query: 349 --------HYWIGRESTQDESGAAAILTVGLDDKFG 432
+W G + T +E GAAA++ V LD++ G
Sbjct: 1829 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERG 1864
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/68 (19%), Positives = 33/68 (48%)
Frame = +1
Query: 625 PQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVDKY 804
PQI+ ++ + V +++YV+ G+++ + ++ + Q+ + G G D + Y
Sbjct: 1598 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 1657
Query: 805 SSDVDVXK 828
+V +
Sbjct: 1658 GKGREVTQ 1665
>SB_38607| Best HMM Match : Gelsolin (HMM E-Value=0.0024)
Length = 693
Score = 44.4 bits (100), Expect = 1e-04
Identities = 49/209 (23%), Positives = 88/209 (42%), Gaps = 21/209 (10%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIIL--------RTTSDSRNNLSWDI 348
N+ T GV +W I + + ++ G F+ G+ Y+I R +D ++ +
Sbjct: 214 NLCNTVGVTVWHINEYRHYELPNENHGHFHSGEGYVIRWAYFVMTDRIATDRKSRCRSTV 273
Query: 349 --------HYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTP 504
+W G + T +E GAAA++ V LD++ G ++ L F T
Sbjct: 274 AGRVRTAYFFWQGNDCTVNEKGAAAVMAVELDEERGPQFFGGWFSIKRVDVL----FDTL 329
Query: 505 LTYLEGGNPSGFN-HVVTNAGAQKRMFQVKGKRDVRVRQVDPQIA--SMNKGDCFVLSL- 672
Y GFN V + + R++ V+ V +++ S+ CFVL +
Sbjct: 330 TAY-------GFNCFFVFSRYSTVRLYVVRNDEPGEGCLVQVRLSGLSLRSRGCFVLLMC 382
Query: 673 -DNDIYVFVGEKAKNVEKLKAISFANQVR 756
D ++V+ G KA + K A+ A ++
Sbjct: 383 RDGKVFVWYGAKALDDTKKNALVAAKNIQ 411
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/68 (19%), Positives = 33/68 (48%)
Frame = +1
Query: 625 PQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVDKY 804
PQI+ ++ + V +++YV+ G+++ + ++ + Q+ + G G D + Y
Sbjct: 43 PQISLLDTKEVLVFDFGSELYVWNGQQSLSGQRKTVFALGKQLYESSFKGHGPYDPIYPY 102
Query: 805 SSDVDVXK 828
+V +
Sbjct: 103 GKGREVTQ 110
>SB_14141| Best HMM Match : HH_signal (HMM E-Value=0)
Length = 754
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 277 FYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDK-FGGAAVQHR 453
FY GDSY+IL D N +H G+ ++ DE AA + +DD+ FGG A Q
Sbjct: 677 FYDGDSYVILDYRKDKTNKKQPVLHILHGKNASTDELFFAATKAIAIDDEYFGGKAKQTV 736
Query: 454 ETMGHESALF 483
+ E F
Sbjct: 737 QVCCREKVQF 746
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 343 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQT 501
++H+W+G E + +E AA V L K G VQ+RE G+E+ F FQ+
Sbjct: 22 NLHFWVGSECSAEEYCTAAYKAVELFVKLEGKPVQYREAEGYETEEFRKCFQS 74
>SB_32906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 34.7 bits (76), Expect = 0.095
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 352 YWIGRESTQDESGAAAILTVGLDDKFG-GAAVQHRETMGHESALFLSYFQTPLTYLEGGN 528
+W G +ST +E GAAA++TV +D + G +H T+ + F Y + + G+
Sbjct: 197 FWQGHDSTVNEKGAAALMTVEIDSEKGPQITFKHTVTVRFDIDTFFIYRECSCFFYCDGH 256
Query: 529 PSG 537
G
Sbjct: 257 ALG 259
>SB_49838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 352 YWIGRESTQDESGAAAILTVGLDDKFG 432
+W G +ST +E GAAA++TV +D + G
Sbjct: 37 FWQGHDSTVNEKGAAALMTVEIDSEKG 63
>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
Length = 659
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 STKEIHTSFYGRPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSST 451
+T + ++ +P+T + I H ST S TS +P +SSP+ TTS+ SST
Sbjct: 59 TTTTVGSTILTQPQTSSAICHTTSTQPHTSSAVGHTTSTKPQKSSPIGPTTSTQPQTSST 118
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +2
Query: 311 RPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSSTERP 460
+P+T +T+ H ST S TS +P SSP+ TTS+ SS P
Sbjct: 112 QPQTSSTVGHTTSTQPQTSSTVGHTTSTKPQTSSPIGHTTSTKPQTSSPIGP 163
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 311 RPRTVATIYHGISTTGSVGSR--RKTSQEPPQSSPLAWTTSSGAPRSS 448
+P+T +T+ H ST S TS +P SSP+ TTS+ SS
Sbjct: 126 QPQTSSTVGHTTSTKPQTSSPIGHTTSTKPQTSSPIGPTTSTQHQTSS 173
>SB_54818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 31.9 bits (69), Expect = 0.67
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 445 QHRETMGHESALFLSYFQTPLTYLEGGNPSGFN---HVVTNAGAQKRMFQVKGKRDVRVR 615
Q R E FL F+ L LEGG +GF T KRMF VKG D+ +
Sbjct: 38 QVRVVQYKEPEHFLRIFRGRLIILEGGKGAGFRAGCEEDTYDHEGKRMFHVKGTTDLNAK 97
Query: 616 QVDPQI 633
+ ++
Sbjct: 98 AIQKRL 103
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 1.5
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 7/142 (4%)
Frame = +2
Query: 149 IKTPVTKPKSIRL--LPMSAEQPVCKYGEYRTSNQYPLL--RRT*ENSTKEIHTSFYGRP 316
IK VT P +I LP++ P + TS Q + T +S+K+ T
Sbjct: 632 IKCSVTSPPTITTHSLPVATSLPKQQTSPKVTSPQQTSTSPQETSTSSSKQTSTQQTSSS 691
Query: 317 RTVATIYHGISTTGSVGSRRKTSQEPPQS--SPLAWTTSSGAPRSSTERPWVTKVLCSYH 490
+ +T +T+ S ++TS PPQ+ SP TTS S +PW+ H
Sbjct: 692 QQTSTSPPQTTTSPS----QQTSTSPPQTTTSPSQQTTSPPPSSPSIGQPWIPVTSTPTH 747
Query: 491 ISRHP*PIWREGIRP-VLTTSS 553
+ +EG +P LT +S
Sbjct: 748 ADQRE-TDQQEGSKPDTLTVTS 768
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 282 QRRFIHHFTDDLGQSQQSIMGYPLLDRSGVDARRVRSRRNPHRW-PGRQVRGRRGPAPRD 458
QRR+IH T G+S+ PL R+ V++R R + + G R RG R
Sbjct: 803 QRRYIHMTTSTTGKSRNRRPYIPLATRTAVESRNQRRYIHMTTFTTGTGPRLPRGGIERQ 862
Query: 459 HGSRK 473
+ RK
Sbjct: 863 YNHRK 867
>SB_1753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 220 IWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRN--NLSWDIHY--WIGR 366
IWR+Q Q +IG + ++ SD+R +LSW H+ W+ R
Sbjct: 160 IWRLQRARNSDSCQSEIGVNFNSRPQLVTNEKSDTRTCLSLSWLSHFSRWLPR 212
>SB_4027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 161 VTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPLLRRT*ENSTKEI 292
+T K RLL +A +P+ K R++N+Y ++ +N K I
Sbjct: 129 ITSTKEERLLVSTASKPIVKLSYNRSNNKYSYTGQSDDNLLKNI 172
>SB_659| Best HMM Match : DUF265 (HMM E-Value=5.2)
Length = 229
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 305 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAW 418
YG T+ +Y T G GS K + + SPLAW
Sbjct: 106 YGGRYTLDVVYEVTKTLGLRGSSTKKKKRIKKKSPLAW 143
>SB_6995| Best HMM Match : DUF740 (HMM E-Value=2.4)
Length = 671
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 694 VGEKAKNVEKLKAISFANQVRDQDHHGRGKVDIVDKYS 807
V E +++++ L ++S +NQ D G VDI+DK S
Sbjct: 474 VAELSQSIKTLDSVSVSNQSMDPVDSLSGSVDILDKES 511
>SB_52882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 86 PSGHGRRPSLRR*AGRSHRCQIKTPVTKPKSIRLLPMSAEQPVCKYGEYRTSNQYPL 256
P+G ++PS +G+ + Q +TP++ KSI +P ++++P + S Q+PL
Sbjct: 1317 PNGQLKQPSSIINSGQLQQLQYRTPISANKSI--IPQTSQEPTSS----QQSCQHPL 1367
>SB_30585| Best HMM Match : Myotub-related (HMM E-Value=2.9e-17)
Length = 488
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +1
Query: 505 LTYLEGGNPSGFNHVVTNAGAQKRMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLD--N 678
LT+ + G G +H+ +KR + VKG DVR R P S+ D V+ L+ N
Sbjct: 70 LTHSKRGGSFG-SHL--KGSMRKRRYHVKGSNDVRKRSGSPS-GSITTDDESVVDLNDIN 125
Query: 679 DIYVFVGEKA-KNVEKLKAI 735
D+ ++ A + V++L ++
Sbjct: 126 DLQLYDEPNAVQGVDRLSSM 145
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 28.3 bits (60), Expect = 8.2
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 148 DKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDI-GKFYKGDSYIILRTTSDS 324
+KN KA + F G + G + I +PV +D Y+ ++ II+ TT +
Sbjct: 694 NKNVTGKAGFYEEFE--GESRGTEKQYIAAQGCLPVTVEDFWAMVYQENTRIIVMTTKEV 751
Query: 325 RNNLSWDIHYWIGRESTQD 381
+ YW E+T+D
Sbjct: 752 ERGRNKCTRYWPDAETTKD 770
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,961,801
Number of Sequences: 59808
Number of extensions: 647558
Number of successful extensions: 2209
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2198
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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