Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_M05
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 175 2e-44
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 103 1e-22
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 103 1e-22
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 34 0.11
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 31 0.78
Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical ... 31 1.4
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 31 1.4
AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical ... 30 2.4
AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical ... 29 5.5
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 29 5.5
AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical ... 28 7.2
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 28 9.5
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 28 9.5
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 175 bits (427), Expect = 2e-44
Identities = 87/214 (40%), Positives = 125/214 (58%), Gaps = 1/214 (0%)
Frame = +1
Query: 181 PAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWI 360
PA A +G+ G+ +WRI F PV + D G FY GD+YI L D WD+H+W+
Sbjct: 8 PALAEIGKKNGLLVWRINKFVLEPVPEVDHGVFYIGDAYIALYQKYDG----CWDVHFWL 63
Query: 361 GRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNPSGF 540
G+ ++ DE G AAI TV +DD GG QHRE +ES LFLSYF + Y+ GG SG+
Sbjct: 64 GKNASTDEIGVAAIKTVEIDDSLGGIPTQHREIQNYESPLFLSYFPDGIRYVSGGYESGY 123
Query: 541 NHVVTNAGAQK-RMFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNV 717
HV K +F KGKR+VR +V+ ++ S+N GD F+L L D+YV++ ++ +
Sbjct: 124 RHVDDQFKNWKPHLFHCKGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRL 183
Query: 718 EKLKAISFANQVRDQDHHGRGKVDIVDKYSSDVD 819
E++K ++ A + D + G KV I+D D D
Sbjct: 184 ERIKGMARAKNIADHERMGIPKVHILDDVEWDND 217
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 103 bits (248), Expect = 1e-22
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 372
+VG G+ +W I+NF P + + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 373 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGFNHV 549
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 550 VTNAGAQKRMFQ--VKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEK 723
R+++ V G V + V + S++ CF+L I+++ G K++
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 724 LKAISFANQVRDQDHHGRGKVD 789
KA FA ++ +D G+ +++
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 103 bits (248), Expect = 1e-22
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Frame = +1
Query: 193 NVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRES 372
+VG G+ +W I+NF P + + G+FY D+Y++L+TT ++ L I YW+G +
Sbjct: 503 DVGSDEGMWVWEIENFYPSIMDEAFHGQFYDADAYLVLKTTREASGQLRHAIFYWLGEHA 562
Query: 373 TQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALFLSYFQTPLTYLEGGNP-SGFNHV 549
+ D+ +A+ VGL + RE M E+ FL+ F + Y+EGG SGF +
Sbjct: 563 SLDKGMCSAVHAVGLRNHLNATCRTQREEMNDETEEFLTLFGEEIVYIEGGRTISGF-YT 621
Query: 550 VTNAGAQKRMFQ--VKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEK 723
R+++ V G V + V + S++ CF+L I+++ G K++
Sbjct: 622 TEKPAHLTRLYRAGVNGTA-VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVS 680
Query: 724 LKAISFANQVRDQDHHGRGKVD 789
KA FA ++ +D G+ +++
Sbjct: 681 NKARLFAERLNKRDRKGKSEIE 702
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 577 MFQVKGKRDVRVRQVDPQIASMNKGDCFVLSLDNDIYVFVGEKAKNVEKLKA 732
+ QV+G ++V VR V P ++S+++ CFV+ + + G + +EK KA
Sbjct: 221 LIQVRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKA 272
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.5 bits (68), Expect = 0.78
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 275 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 436
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 91 SSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 150
Query: 437 PRSSTERP 460
+STE P
Sbjct: 151 ETTSTEAP 158
Score = 31.5 bits (68), Expect = 0.78
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 275 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 436
+ST + T+ P T +T STT + + TS EPP SS P+ TT++
Sbjct: 137 SSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 196
Query: 437 PRSSTERP 460
+STE P
Sbjct: 197 ETTSTEPP 204
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 275 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 436
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 804 SSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 863
Query: 437 PRSSTERP 460
+STE P
Sbjct: 864 ETTSTEPP 871
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Frame = +2
Query: 275 NSTKEIHTSFYGRPRTVATIYHGISTTG----SVGSRRKTSQEPPQSS--PLAWTTSSGA 436
+ST + T+ P T +T S T + + TS EPP SS P+ TT++
Sbjct: 666 SSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTTAP 725
Query: 437 PRSSTERP 460
+STE P
Sbjct: 726 ETTSTEPP 733
>Z68014-2|CAA92024.1| 565|Caenorhabditis elegans Hypothetical
protein W04G3.2 protein.
Length = 565
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 252 GYWFEVLYSPYLHTG-CSADIGKSRMDFGFVTGVFI 148
G W++V+YSP + TG CS K D G TG +
Sbjct: 402 GQWYQVIYSPPVSTGPCSMVSYKKLSDNGEATGSIV 437
>AL110499-2|CAB57913.1| 297|Caenorhabditis elegans Hypothetical
protein Y62F5A.1b protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 305 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 448
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +2
Query: 305 YGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSS 448
Y R T A I I T + S+R + PP S+P+ SS P SS
Sbjct: 191 YNRDET-AKIVKSILTGEGIRSQRTMAPAPPSSAPMTTAPSSTGPSSS 237
>AF039718-6|AAB96743.1| 249|Caenorhabditis elegans Hypothetical
protein T12F5.1 protein.
Length = 249
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +1
Query: 100 TATKPQEISGPITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQK 264
T K QE+ GP+ D+ D AK ++ R G QNF+ I + +K
Sbjct: 171 TPEKGQEVEGPVEEFDDETNEDVAKAR-SYNPAARKLGGSSKSDQNFQKINLRKK 224
>AC006631-1|AAF39793.2| 787|Caenorhabditis elegans Hypothetical
protein F27B3.5 protein.
Length = 787
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 462 GSRKCFVPIIFPDTLDLFGGRESVRF*PRRHERGSPETNV 581
GS K F I+ PD +D+F G S RR+ +G + N+
Sbjct: 321 GSHKMFCSILPPDPVDIFLGVSSSHKDLRRYIKGEDKENM 360
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 462 GSRKCFVPIIFPDTLDLFGGRESVRF*PRRHERGSPETNV 581
GS K F I+ PD +D+F G S RR+ +G + N+
Sbjct: 528 GSHKMFCSILPPDPVDIFLGVSSSHKDLRRYIKGEDKENM 567
>AF038611-7|AAB92040.1| 466|Caenorhabditis elegans Hypothetical
protein E04A4.6 protein.
Length = 466
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 196 VGRTAGVQIWRIQNFEPIPVAQKDIGKFYKG 288
VG AG Q +R++ P+P A +G Y G
Sbjct: 259 VGYKAGEQTYRVKGSIPVPFAVPTLGNCYSG 289
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 206 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 60
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 726 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 774
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 206 VLPTLAKAGWTLALSRAFLSDSDVIGPLIS*GLVAVRAQTDPRKTKRRH 60
V P KAGW + L D+ + G ++ V + P + K+RH
Sbjct: 719 VEPDSRKAGWAIVRFVGLLQDTTINGDSTDSKVLHVVVEGQPSRIKKRH 767
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,284,873
Number of Sequences: 27780
Number of extensions: 466901
Number of successful extensions: 1513
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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