Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L24
         (807 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   0.71 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.94 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.0  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   6.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   6.6  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect(2) = 0.71
 Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = +1

Query: 502  PCNPGEHTPE---CSVR*RC 552
            PC PG++ P+   C+   RC
Sbjct: 1102 PCEPGQYVPDPHNCNAYYRC 1121



 Score = 20.6 bits (41), Expect(2) = 0.71
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 637  YECSCGNLVS*YCSHGL 687
            Y C  G L   YC+ GL
Sbjct: 1119 YRCVLGELRKQYCAGGL 1135


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 169 GIFRSLTVSRHFLYITFYFINTISSILCRFRRENR 65
           G FR        LY  FY+   +  I+C FR + R
Sbjct: 140 GYFREYLAEAVQLYFQFYYTYFLCVIVCIFRGKYR 174


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 60  LQHRPHTRHVKQNGGTIGRP 1
           +Q R HTRH   +  T G P
Sbjct: 274 IQRRTHTRHTTTSHNTRGTP 293


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 257 PIFCYGKLPVRCLGPLLVCP 198
           P   Y ++P RC G L  CP
Sbjct: 338 PYTMYFRMPHRCHGNLQSCP 357


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -3

Query: 139 HFLYITFYFINTISSILC 86
           HFL  T+YF      +LC
Sbjct: 95  HFLLCTYYFYYAFIILLC 112


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 443 CVPLPYGDSLL*P 405
           C+P P GDS L P
Sbjct: 357 CIPTPNGDSRLPP 369


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 443 CVPLPYGDSLL*P 405
           C+P P GDS L P
Sbjct: 357 CIPTPNGDSRLPP 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,272
Number of Sequences: 336
Number of extensions: 5297
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)