Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L24
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying defe... 232 2e-61
AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine re... 31 1.3
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 30 2.2
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical ... 29 5.2
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical pr... 28 6.8
U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical pr... 28 6.8
U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical pr... 28 6.8
U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical ... 28 9.0
>L23650-1|AAA27955.1| 1076|Caenorhabditis elegans Egg laying
defective protein 45 protein.
Length = 1076
Score = 232 bits (568), Expect = 2e-61
Identities = 112/209 (53%), Positives = 148/209 (70%)
Frame = +2
Query: 146 YGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELCVDL 325
Y Q+PE ALKRA E + + K + ALDTL + + ++ W+ +V E IM K++ELCVDL
Sbjct: 5 YFQKPEAALKRAEELIQVGKESDALDTLHDTIKARRHK-QWT-TVHEQIMIKHMELCVDL 62
Query: 326 RKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETARALSTQAVIDTDDLDNL 505
+K H+AK+ LFQY+ + Q +NV SLE V+ +L++AE+RTE A+ S + V + DLD
Sbjct: 63 KKQHLAKDALFQYKALTQQINVKSLETVVVHFLKLAEQRTEDAQKQSIEKVEEIGDLDQG 122
Query: 506 ATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETLYHDIARMA 685
PE +LL+ VSG AQDR DRT+L PW++FLW+SY CLELLR NA VE LYH I+R +
Sbjct: 123 DVPERLLLAVVSGAAAQDRMDRTVLAPWLRFLWDSYRNCLELLRNNAQVEQLYHTISRHS 182
Query: 686 FQFCLKYSRKTEFRKLCDKLRKHLEDICK 772
F FCL+Y R+TEFRKLCD LR HL I K
Sbjct: 183 FTFCLRYQRRTEFRKLCDLLRMHLNQIQK 211
>AF024498-7|AAF39806.2| 279|Caenorhabditis elegans Serpentine
receptor, class x protein104 protein.
Length = 279
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 288 QSCSNTWNFALIYVNLMLQRKVCSSTETCSNQLTLGL 398
QSC W L+ +N +L C S C+N +T+GL
Sbjct: 222 QSCFQDWIAVLVILNNILASMYCRS-HVCTNLITMGL 257
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3
Query: 256 PFFVTENFL*GV*GPCWFVQIHELIGP 176
PFFV NF G GPC F +HEL GP
Sbjct: 581 PFFVGANF--GTSGPCSFDHLHEL-GP 604
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3
Query: 256 PFFVTENFL*GV*GPCWFVQIHELIGP 176
PFFV NF G GPC F +HEL GP
Sbjct: 301 PFFVGANF--GTSGPCSFDHLHEL-GP 324
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/95 (22%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +2
Query: 278 VLEPIMFKYLELCVDLR-KSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTETA 454
VLE + KY E C+ L+ ++ + KE L Q + +VN + + +L + +E++
Sbjct: 355 VLEQEIVKYQEKCISLKQENEILKEKLQQLSSSL-TVNQNHV-STLMDHLEINKEQSREI 412
Query: 455 RALSTQAVIDTDDLDNLATPESILLSAVSGEDAQD 559
+ + + + D +N + LL+++ E +
Sbjct: 413 QGICKKEIAIRQDHENRINHDVTLLNSLINEQKME 447
>AF039041-2|AAP46270.1| 587|Caenorhabditis elegans Hypothetical
protein W03F8.10 protein.
Length = 587
Score = 28.7 bits (61), Expect = 5.2
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 101 NCVNEVESDIKKMARYGQRPENALKRANEFMDLDKPARALDTLQEVFRNKKWAYNWSESV 280
N ++E+ ++ + E+ +AN+ +L + +A++ ++E + AYN SV
Sbjct: 359 NNIDEILNETRGNKSIAANLESRAVKANKEAELLQ--KAMEEIREALQLADQAYNNVTSV 416
Query: 281 LEPI---MFKYLELCVDLRKSHVAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAE 436
LE I + EL R S A EG Q N + G + V YL+++E
Sbjct: 417 LEEIDTMQVQARELIDKARNSTEAVEGKAQAANTTLAELEGVMSGVKVEYLQISE 471
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 629 LLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLRKHLEDI 766
LL H+ +L + I AF FCL++ E R +R H+++I
Sbjct: 209 LLLGRLHLLSLENTIRVAAFLFCLQFGNFDETRHDVAFIRNHIDEI 254
>Z37983-2|CAA86055.1| 585|Caenorhabditis elegans Hypothetical
protein B0393.2 protein.
Length = 585
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 77 PKPT*NRRNCVNEVESDIKKMARYGQRPENALK-RANEFMDLDKPARALDTLQEVFRNKK 253
P N +N E S I +A Q+ +N ++ R+N P R+ + L+E R +
Sbjct: 410 PPAAVNSKNDGAESPSTILALAPVFQKVKNTIRDRSNTVSGPSSPRRSNEPLREPLRTPQ 469
Query: 254 WAYNWSESV 280
NW+ V
Sbjct: 470 KKDNWANEV 478
>U55373-9|AAV58870.1| 648|Caenorhabditis elegans Hypothetical
protein F26F12.3c protein.
Length = 648
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 617 QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 748
+C+E + + ++ + D+ A Q S+KTEF K KL+
Sbjct: 519 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 562
>U55373-8|AAD34666.1| 805|Caenorhabditis elegans Hypothetical
protein F26F12.3b protein.
Length = 805
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 617 QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 748
+C+E + + ++ + D+ A Q S+KTEF K KL+
Sbjct: 676 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 719
>U55373-7|AAC25890.2| 890|Caenorhabditis elegans Hypothetical
protein F26F12.3a protein.
Length = 890
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 617 QCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 748
+C+E + + ++ + D+ A Q S+KTEF K KL+
Sbjct: 761 RCVESIVASKQIKKEFSDVCGEARQLRFSTSKKTEFEKAVRKLK 804
>AF016444-8|AAB65934.1| 219|Caenorhabditis elegans Hypothetical
protein C36C5.12 protein.
Length = 219
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 605 ESYCQCLELLRTNAHVETLYHDIARMAFQFCLKYSRKTEFRKLCDKLR 748
E+YC+ ++T +E L A++ K S EF+K CD L+
Sbjct: 46 ETYCELRSAIQTFLCIERLRDFAAKVDELDMDKKSELKEFKKTCDSLK 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,194,068
Number of Sequences: 27780
Number of extensions: 508392
Number of successful extensions: 1308
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1305
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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