Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L21
         (870 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.91 
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.8  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   8.5  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.91
 Identities = 18/62 (29%), Positives = 25/62 (40%)
 Frame = -3

Query: 424 AALCRHSVGRTT*DLTPTVSIGTLGLANAASSIVTLTFSPLGNSNSDGNRSAIANFKPSS 245
           A + R S    T   T T   G+L  + A S +  +  S     N D N    A   P+S
Sbjct: 218 AQMGRPSYTTATMATTSTPGSGSLPASPADSGVSDVESSTSSGGNEDANLLLKARLNPNS 277

Query: 244 SI 239
           S+
Sbjct: 278 SL 279


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +3

Query: 702 GNLFSDYGVLVRCVTSDQTSTNNVLHFLTNGTCXLMFSYRK 824
           G  F D+  +   +  +  S  N+  +LTN +C +  +  K
Sbjct: 45  GLTFKDFIKMQELLQEEDISEGNIKKYLTNYSCFITCALEK 85


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 626 ASSPYVVGYTKELPCGHQAVRMED 697
           A SPY     K  PC H  + ++D
Sbjct: 52  ACSPYFRELLKSTPCKHPVIVLQD 75


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 717 DYGVLVRCVTSDQTSTNNVLHFLTN 791
           DY  LV   T DQ+ T +VL    N
Sbjct: 249 DYESLVHLYTRDQSETYDVLRSWRN 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,712
Number of Sequences: 438
Number of extensions: 5221
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)