Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L20
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.01c |||uracil phosphoribosyltransferase |Schizosaccharom... 182 4e-47
SPAC1399.04c |||uracil phosphoribosyltransferase |Schizosaccharo... 146 2e-36
SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr 3||... 98 1e-21
SPAC1002.17c |urg2||uracil phosphoribosyltransferase |Schizosacc... 33 0.045
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 31 0.24
SPAC977.16c |dak2||dihydroxyacetone kinase Dak2 |Schizosaccharom... 29 0.97
SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase Ups1|Schizos... 27 2.2
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 27 3.0
SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr... 27 3.9
SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4 |Schiz... 27 3.9
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 26 5.2
SPCC1919.02 |||pig-X|Schizosaccharomyces pombe|chr 3|||Manual 26 6.8
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.0
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 25 9.0
>SPAC1B3.01c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 219
Score = 182 bits (444), Expect = 4e-47
Identities = 90/206 (43%), Positives = 135/206 (65%), Gaps = 9/206 (4%)
Frame = +1
Query: 157 LLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTECEVVTPTGAIYK 336
+L + +K L TI+RDK RS+F FYA+R+IRL++EE LN LP + +V T A Y+
Sbjct: 12 VLNQTNQLKGLFTIIRDKTKPRSEFIFYANRIIRLIVEEGLNHLPVSSAKVTTAQNAEYE 71
Query: 337 GLKYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAHVVYAKFPEDIAR 516
G+ + CGVSI+R+GE+MEQGLR+CCRS+RIGKIL++ D +TH+ + Y K PEDI++
Sbjct: 72 GVMFDGRICGVSIMRAGESMEQGLRECCRSVRIGKILIQRDEETHKPVLHYIKLPEDISK 131
Query: 517 RQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAVVDHVPKMKILTS 696
R VLL+ P+++TG + A+ +L G K+E+II N+ +P ++ V D P ++I+T+
Sbjct: 132 RYVLLLDPMLATGGSAICAMEILINMGCKQEQIIFLNVIASPEGLKNVHDRFPNIRIVTA 191
Query: 697 ELHPVAPNH---------FGQKYFGT 747
+ N+ FG YFGT
Sbjct: 192 VIDEGLDNNGYIVPGLGDFGDIYFGT 217
>SPAC1399.04c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 220
Score = 146 bits (355), Expect = 2e-36
Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%)
Frame = +1
Query: 145 DSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTECEVVTPTG 324
+++ +L + L TILRD+ T S+F A+ +I ++++E+L+ LPY +C + T +G
Sbjct: 9 ENVVVLRQTMYLLSLMTILRDQQTGHSEFVRTANLIINMLMQEALSALPYKKCLIKTSSG 68
Query: 325 AIYKGLKYGAGNCGVSIVRSGEAMEQGLRDCCR-SIRIGKILVESDTDTHEAHVVYAKFP 501
Y G++ CGVSI+R+GE+ME GL C S+ +GK+LV+ D T EA +++ K P
Sbjct: 69 GTYTGVQPARDICGVSILRAGESMEYGLAAACNYSVPVGKLLVQRDETTFEAKLMFCKLP 128
Query: 502 EDIARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAVVDHVPKM 681
+D R VLL+ P+++TGN+V A+ L G+ EE I+ NL + V PK+
Sbjct: 129 KDAQDRLVLLLDPLLATGNSVILAIQTLINKGIPEENIVFVNLIACNEGITNVFAKFPKL 188
Query: 682 KILTSELHP-------VAP--NHFGQKYFGT 747
+++T+ + P V P FG +YFGT
Sbjct: 189 RMVTASIDPELNANKYVVPGCGDFGDRYFGT 219
>SPCC162.11c |||uridine kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 454
Score = 97.9 bits (233), Expect = 1e-21
Identities = 60/189 (31%), Positives = 98/189 (51%)
Frame = +1
Query: 148 SLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTECEVVTPTGA 327
+L L I ++TIL +KNT D +F+ R+ +++ + + L Y + + G
Sbjct: 250 NLVQLKITPEISAIRTILINKNTHPDDLQFFLSRIGTMLMNLAGDSLAYEKKTITLHNGN 309
Query: 328 IYKGLKYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAHVVYAKFPED 507
++GL+ CGVS++RSG +E L ++ +GKILV+ + T E + Y K P
Sbjct: 310 QWEGLQMAKELCGVSVLRSGGTLETALCRQFPTVCLGKILVQINKVTQEPTLHYHKLPRG 369
Query: 508 IARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAVVDHVPKMKI 687
IA V+LM ++T V A +L GV EE II+ C +++A+ PK+ I
Sbjct: 370 IATMNVVLMASHLTTHADVLMATQILVDFGVPEENIIIVVYVCYSESIKALAYIFPKVTI 429
Query: 688 LTSELHPVA 714
+T+ L VA
Sbjct: 430 VTAFLESVA 438
>SPAC1002.17c |urg2||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 33.1 bits (72), Expect = 0.045
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 367 VSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAHVVYAKFPEDIARRQVLLMYPIM 546
V ++RSG +M + I I + + T + Y K P+ V+L P+M
Sbjct: 56 VPVLRSGMSMMSAFSKVLPDVPIYHIGIFREKSTLQPIEYYNKLPKKSTDTAVILD-PVM 114
Query: 547 STGNTVKQAVNVLKQHGVK 603
+TG T + L++ G K
Sbjct: 115 ATGGTANAVITTLQEWGCK 133
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +1
Query: 181 KELQTILRDKNTSRS-DFKFYADRLIRLVIEESLNKLPYTECEV 309
KEL+ + +D T+ + KF+ +L ++ +E++L+ LP+ E E+
Sbjct: 135 KELKALSKDSETNEEQERKFWLTKL-QIAVEDTLDSLPHIEMEI 177
>SPAC977.16c |dak2||dihydroxyacetone kinase Dak2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 591
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 349 GAGNCGVSIVRSGEAMEQGLRDCCRSIRI 435
G G+CG ++V GEA+ + + D +SIR+
Sbjct: 412 GDGDCGTTLVNGGEAITKAIND--KSIRL 438
>SPAC31G5.08 |ups1|ups|uroporphyrinogen-III synthase
Ups1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 251
Score = 27.5 bits (58), Expect = 2.2
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +1
Query: 343 KYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKI-LVESDTDTHEAHVVYAKFPEDIARR 519
KYG + ++R E+ LRD +++R L+ + E K ++ R+
Sbjct: 23 KYGRDTAFIPVLRHKRVHEEQLRDKLKNVRKTYCGLIVTSQRVSETLDEALKQEDETERQ 82
Query: 520 QVLLMYPIMSTGNTVKQAVNVL 585
++L+ PI + G ++ L
Sbjct: 83 KILMETPIFTVGPATDDSIRRL 104
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 406 LRDCCRSIRIGKILVESDTDTHEAHVVYAKFPEDIARRQ 522
LR I + K + S+TD H+ + +AK P++ R+
Sbjct: 870 LRSRLNEITVYKAFLYSNTDKHKNLLAFAKVPQETMTRE 908
>SPBC887.02 |||ClC chloride channel|Schizosaccharomyces pombe|chr
2|||Manual
Length = 667
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 168 RWQKSQTVPELFFNIICVPLPDVLI 94
RW T+P +F +I+C L VLI
Sbjct: 286 RWSYKDTLPFIFISILCGCLGSVLI 310
>SPBC31F10.11c |cwf4|syf3|complexed with Cdc5 protein Cwf4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 674
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 502 EDIARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIIL 621
E+ +V ++ N + A+ L+Q G+KEER++L
Sbjct: 556 EEPPNEEVASPTAVVRARNVFENALAHLRQQGLKEERVVL 595
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Frame = +1
Query: 475 AHVVYAKFPEDIARRQVLLMY------PIMSTGNTVKQAV----NVLKQHGVKEERIILS 624
A ++ K+P DIA Q L+Y P+ + +KQ++ +VL + G+ E ++
Sbjct: 505 AKLLLRKYPLDIAEHQFALVYSRFQRIPLKQI-SCLKQSLVAYYSVLSEVGITNEIMLRE 563
Query: 625 NLFCTPAAVQAVV 663
N F +P + +V
Sbjct: 564 NRFSSPKTPEGLV 576
>SPCC1919.02 |||pig-X|Schizosaccharomyces pombe|chr 3|||Manual
Length = 332
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 377 CVQEKQWNRALETVVDL 427
C+ EK WN +LETV +L
Sbjct: 105 CMSEKGWNVSLETVPNL 121
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +1
Query: 160 LPSNDNIKELQTILRDKNTSRSDFKFYAD-----RLIRLVIEESLNK 285
LP+ D +KE + + KNT + F +D RL IEE +NK
Sbjct: 660 LPNVDLLKESEAVSETKNTKNNTFILKSDLKEEERLTNFTIEE-INK 705
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 25.4 bits (53), Expect = 9.0
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -2
Query: 530 SNTCRLAMSSGNFA-YTT*ASCVSVSLSTKILPIRIDLQQSLRPCSIASPERTIDTPQFP 354
S+ C+ + S +F+ Y + ++ + L T L + SL P S +SP I FP
Sbjct: 273 SDACKFSHSVVDFSNYKSYSTWKARELQT--LEQHRKIMLSLIPLS-SSPNHPIQPIGFP 329
Query: 353 APYLSPLYIAPV 318
A +P Y+ P+
Sbjct: 330 ASRKTPTYVPPI 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,265,876
Number of Sequences: 5004
Number of extensions: 68833
Number of successful extensions: 199
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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