Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L20
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99709-3|CAB54198.1|  231|Caenorhabditis elegans Hypothetical pr...   200   7e-52
Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical pr...   180   1e-45
Z69635-2|CAA93462.1|  555|Caenorhabditis elegans Hypothetical pr...   140   1e-33
Z69635-1|CAA93459.1|  515|Caenorhabditis elegans Hypothetical pr...   140   1e-33
L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AF068709-17|AAC19257.2|  287|Caenorhabditis elegans Serpentine r...    29   3.6  
AF016430-5|AAB65373.1|  581|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z99709-3|CAB54198.1|  231|Caenorhabditis elegans Hypothetical
           protein C47B2.2b protein.
          Length = 231

 Score =  200 bits (489), Expect = 7e-52
 Identities = 101/207 (48%), Positives = 138/207 (66%)
 Frame = +1

Query: 124 DVKEQFGDSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTEC 303
           ++KE+ G +  LL     I ELQTIL+D++T+ SDF F ADRL+RLVIEE LN LP+TE 
Sbjct: 29  NLKEK-GTNFVLLKKTPQILELQTILKDRSTNHSDFVFNADRLMRLVIEECLNHLPFTEH 87

Query: 304 EVVTPTGAIYKGLKYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAHV 483
            V TPTG  Y+G+++  GNCGVS+ RSGEAME  LR CCR IRIGKIL+       E  V
Sbjct: 88  TVTTPTGFKYEGIQFNRGNCGVSLCRSGEAMEVSLRQCCRCIRIGKILIGD-----EQKV 142

Query: 484 VYAKFPEDIARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAVV 663
           +YA+   DI  R+VLL+YP + +G TV +A+ VLK+  V +E I L +LF +P  ++ + 
Sbjct: 143 LYARLLPDITSRRVLLLYPTIGSGTTVCKAIEVLKEARVPDENIYLVSLFISPTGLKNIT 202

Query: 664 DHVPKMKILTSELHPVAPNHFGQKYFG 744
              P + ++ S++  + PNHF   YFG
Sbjct: 203 RKYPYITVVASDITSLYPNHFSTSYFG 229


>Z99709-2|CAB16859.1|  307|Caenorhabditis elegans Hypothetical
           protein C47B2.2a protein.
          Length = 307

 Score =  180 bits (438), Expect = 1e-45
 Identities = 88/179 (49%), Positives = 120/179 (67%)
 Frame = +1

Query: 208 KNTSRSDFKFYADRLIRLVIEESLNKLPYTECEVVTPTGAIYKGLKYGAGNCGVSIVRSG 387
           ++T+ SDF F ADRL+RLVIEE LN LP+TE  V TPTG  Y+G+++  GNCGVS+ RSG
Sbjct: 132 RSTNHSDFVFNADRLMRLVIEECLNHLPFTEHTVTTPTGFKYEGIQFNRGNCGVSLCRSG 191

Query: 388 EAMEQGLRDCCRSIRIGKILVESDTDTHEAHVVYAKFPEDIARRQVLLMYPIMSTGNTVK 567
           EAME  LR CCR IRIGKIL+       E  V+YA+   DI  R+VLL+YP + +G TV 
Sbjct: 192 EAMEVSLRQCCRCIRIGKILIGD-----EQKVLYARLLPDITSRRVLLLYPTIGSGTTVC 246

Query: 568 QAVNVLKQHGVKEERIILSNLFCTPAAVQAVVDHVPKMKILTSELHPVAPNHFGQKYFG 744
           +A+ VLK+  V +E I L +LF +P  ++ +    P + ++ S++  + PNHF   YFG
Sbjct: 247 KAIEVLKEARVPDENIYLVSLFISPTGLKNITRKYPYITVVASDITSLYPNHFSTSYFG 305



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +1

Query: 124 DVKEQFGDSLTLLPSNDNIKELQTILRDKNTSR-SDFKFY 240
           ++KE+ G +  LL     I ELQTIL+D+   + +DF+++
Sbjct: 29  NLKEK-GTNFVLLKKTPQILELQTILKDRFCGKINDFRYF 67


>Z69635-2|CAA93462.1|  555|Caenorhabditis elegans Hypothetical
           protein F19B6.1b protein.
          Length = 555

 Score =  140 bits (339), Expect = 1e-33
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 9/218 (4%)
 Frame = +1

Query: 121 DDVKEQFGDSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTE 300
           DD+ +   ++L +L     +K L T +RD+ TSR +  FY+DRL+R++IEE +N +PY +
Sbjct: 326 DDLPDCLPENLFILKETPQVKGLVTFVRDRETSRDNHIFYSDRLMRILIEECMNHMPYKD 385

Query: 301 CEVVTPTGAIYKGLKYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAH 480
            E+    G    G +  A  CG+ I+R+GE ME  LR   +   IGKIL++++  T +  
Sbjct: 386 VEIEMAGGRKTIGKRKDAQICGLPIMRAGECMETALRSIVKDCVIGKILIQTNETTFDPE 445

Query: 481 VVYAKFPEDIARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAV 660
           + Y + P  I R +V++M   ++TG+    A+ VL  H VKEE I +++L        A+
Sbjct: 446 LHYIRLPPHITRYKVIIMDATVTTGSAAMMAIRVLLDHDVKEEDIFVASLLMGQQGAHAL 505

Query: 661 VDHVPKMKILTSEL-HPVAPN--------HFGQKYFGT 747
               PK+K++T+ + H +  N        +FG +Y+GT
Sbjct: 506 AYAFPKVKLITTAMDHQMTENCYLIPGMGNFGDRYYGT 543


>Z69635-1|CAA93459.1|  515|Caenorhabditis elegans Hypothetical
           protein F19B6.1a protein.
          Length = 515

 Score =  140 bits (339), Expect = 1e-33
 Identities = 74/218 (33%), Positives = 123/218 (56%), Gaps = 9/218 (4%)
 Frame = +1

Query: 121 DDVKEQFGDSLTLLPSNDNIKELQTILRDKNTSRSDFKFYADRLIRLVIEESLNKLPYTE 300
           DD+ +   ++L +L     +K L T +RD+ TSR +  FY+DRL+R++IEE +N +PY +
Sbjct: 286 DDLPDCLPENLFILKETPQVKGLVTFVRDRETSRDNHIFYSDRLMRILIEECMNHMPYKD 345

Query: 301 CEVVTPTGAIYKGLKYGAGNCGVSIVRSGEAMEQGLRDCCRSIRIGKILVESDTDTHEAH 480
            E+    G    G +  A  CG+ I+R+GE ME  LR   +   IGKIL++++  T +  
Sbjct: 346 VEIEMAGGRKTIGKRKDAQICGLPIMRAGECMETALRSIVKDCVIGKILIQTNETTFDPE 405

Query: 481 VVYAKFPEDIARRQVLLMYPIMSTGNTVKQAVNVLKQHGVKEERIILSNLFCTPAAVQAV 660
           + Y + P  I R +V++M   ++TG+    A+ VL  H VKEE I +++L        A+
Sbjct: 406 LHYIRLPPHITRYKVIIMDATVTTGSAAMMAIRVLLDHDVKEEDIFVASLLMGQQGAHAL 465

Query: 661 VDHVPKMKILTSEL-HPVAPN--------HFGQKYFGT 747
               PK+K++T+ + H +  N        +FG +Y+GT
Sbjct: 466 AYAFPKVKLITTAMDHQMTENCYLIPGMGNFGDRYYGT 503


>L14745-9|AAK71355.2|  380|Caenorhabditis elegans Hypothetical
           protein C02F5.12 protein.
          Length = 380

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +1

Query: 160 LPSNDNIKELQTILRDKNTSRSDFKF----YADRLIRLVIEESLNKLPYTECEVVTPTGA 327
           +P  + + E + IL D+ +  S F       A+   R +IE+ L +  +TE ++     +
Sbjct: 157 VPKKEVLDESEEIL-DQTSGSSSFSLNDSEQANEQERNIIEDLLRQQMFTESKIKNEEAS 215

Query: 328 IYKGLKYGAG 357
           + KGLK G G
Sbjct: 216 LLKGLKKGLG 225


>AF068709-17|AAC19257.2|  287|Caenorhabditis elegans Serpentine
           receptor, class x protein24 protein.
          Length = 287

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 573 SLFNCISCRHYWVHEQHLSSCNVFWKLRIYNMSFMCISITFY*DF 439
           S+  C +   Y V   HL     FW L+   +S +C  IT+Y DF
Sbjct: 131 SIIGCTAI--YEVANCHLEYDADFWNLQFIKISELCEEITWYSDF 173


>AF016430-5|AAB65373.1|  581|Caenorhabditis elegans Hypothetical
           protein C05C8.6 protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 681 HFGYVIDYSLYRCRCAE*IR*NDSFFFDSVLL*YIYSLFNCISCR 547
           H+  V DYS Y CR  + +     FF DSV+   +  + N +SC+
Sbjct: 374 HWNLVADYSEYDCRGTQRL-----FFTDSVVRHILIRVNNSMSCK 413


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,150,219
Number of Sequences: 27780
Number of extensions: 390665
Number of successful extensions: 1042
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)