Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L14
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.66 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.66 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 304 HPAMSAHPTHLRCSEHP 254
           HP +S HP HL  S HP
Sbjct: 233 HPGLSPHPPHL--SSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -1

Query: 304 HPAMSAHPTHLRCSEHP 254
           HP +S HP HL  S HP
Sbjct: 125 HPGLSPHPPHL--SSHP 139


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 515 SPGPMNNQTGF 547
           SPGP  N TGF
Sbjct: 296 SPGPYTNATGF 306


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 604  TARAYQPQEPALERSSHICEPGLVV 530
            T   Y+PQEP L      C+  L V
Sbjct: 2219 TTIGYEPQEPVLPAEVVPCQGRLFV 2243


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,617
Number of Sequences: 336
Number of extensions: 3379
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)