Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L14
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exteri...   223   1e-58
AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector ...   223   1e-58
AL031629-1|CAA20974.1|  287|Caenorhabditis elegans Hypothetical ...    33   0.29 
Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical pr...    29   3.6  
X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.       29   3.6  
U49830-8|AAK31475.1|  439|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AF014940-8|AAY43994.1|  356|Caenorhabditis elegans Hypothetical ...    29   4.8  
Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81560-5|CAB04550.2|  123|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF038619-5|AAB92078.6| 1262|Caenorhabditis elegans Gut on exterior
           protein 2 protein.
          Length = 1262

 Score =  223 bits (544), Expect = 1e-58
 Identities = 101/163 (61%), Positives = 126/163 (77%)
 Frame = +1

Query: 232 VSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYI 411
           ++  V++ DA+SNV++LD L +PD+ P IEA    +LY++NFDTNFEDR+ F+TGIAKY 
Sbjct: 1   MNANVTVDDAISNVNLLDTLAIPDDLPDIEARALPLLYRSNFDTNFEDRSAFVTGIAKYS 60

Query: 412 EEATVHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVD 591
           EEAT HA  N++L EG  HA  +YTWRCCSRA+P  +SN+QP+R  I E  V+VL PEV 
Sbjct: 61  EEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSNDQPNRTEINEMVVEVLKPEVS 120

Query: 592 KLLQFMYFQRKAIERFCAEVRRLCHAEKRRDFVSEAYLLTLGK 720
           KL  FM F   AI+RFC EVRRLCH+EKRRDFVSEAYLLTLG+
Sbjct: 121 KLGSFMRFTLTAIQRFCEEVRRLCHSEKRRDFVSEAYLLTLGR 163


>AB073209-1|BAB70472.1| 1262|Caenorhabditis elegans rac effector
           protein.
          Length = 1262

 Score =  223 bits (544), Expect = 1e-58
 Identities = 101/163 (61%), Positives = 126/163 (77%)
 Frame = +1

Query: 232 VSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFITGIAKYI 411
           ++  V++ DA+SNV++LD L +PD+ P IEA    +LY++NFDTNFEDR+ F+TGIAKY 
Sbjct: 1   MNANVTVDDAISNVNLLDTLAIPDDLPDIEARALPLLYRSNFDTNFEDRSAFVTGIAKYS 60

Query: 412 EEATVHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPEVD 591
           EEAT HA  N++L EG  HA  +YTWRCCSRA+P  +SN+QP+R  I E  V+VL PEV 
Sbjct: 61  EEATRHAQFNDMLSEGLQHAANMYTWRCCSRAVPMAKSNDQPNRTEINEMVVEVLKPEVS 120

Query: 592 KLLQFMYFQRKAIERFCAEVRRLCHAEKRRDFVSEAYLLTLGK 720
           KL  FM F   AI+RFC EVRRLCH+EKRRDFVSEAYLLTLG+
Sbjct: 121 KLGSFMRFTLTAIQRFCEEVRRLCHSEKRRDFVSEAYLLTLGR 163


>AL031629-1|CAA20974.1|  287|Caenorhabditis elegans Hypothetical
           protein Y106G6D.1 protein.
          Length = 287

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
 Frame = +1

Query: 220 KAMSVSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNF-EDRNGFITG 396
           K M +  K   ++  S   ++ E TLP++QP ++      L     + NF E R    T 
Sbjct: 132 KKMEMEIKFYQNENFSLRRMMMETTLPEQQPALKELFKMTLKLDTLENNFYESRKSINTK 191

Query: 397 IAKYIEEATVHANLNE--LLEEGNAHAV 474
           +  Y+EE  +   L +  L ++G  H++
Sbjct: 192 LINYMEECKLLQELKDEMLTQKGFLHSI 219


>Z50873-1|CAA90760.2|  961|Caenorhabditis elegans Hypothetical
           protein F17E5.1a protein.
          Length = 961

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 363 SIEISLIQDRTRCCFDTW-LFIRQCQLIQHIYVAQSIRQRHFFTYRHCFFHN 211
           SI ++L +  T   F+     IR CQ +QH Y+ +  +  +   YRH  F N
Sbjct: 47  SINLNLFRQHTGLGFEEIDEEIRICQNLQHPYICRLEKTINSVHYRHIIFEN 98


>X92564-1|CAA63314.1|  961|Caenorhabditis elegans LIN-2A protein.
          Length = 961

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -2

Query: 363 SIEISLIQDRTRCCFDTW-LFIRQCQLIQHIYVAQSIRQRHFFTYRHCFFHN 211
           SI ++L +  T   F+     IR CQ +QH Y+ +  +  +   YRH  F N
Sbjct: 47  SINLNLFRQHTGLGFEEIDEEIRICQNLQHPYICRLEKTINSVHYRHIIFEN 98


>U49830-8|AAK31475.1|  439|Caenorhabditis elegans Hypothetical
           protein C33F10.7a protein.
          Length = 439

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 509 YLSPGPMNNQTGFTYMRGPFKCW 577
           YL   P N + GFTY + P   W
Sbjct: 347 YLIGEPQNKEHGFTYFKSPLNTW 369


>AF014940-8|AAY43994.1|  356|Caenorhabditis elegans Hypothetical
           protein W02D7.2 protein.
          Length = 356

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 346 QANFDTNFEDRNGFITGIAKYIEEATVHANLNE 444
           Q    +N+ D+ G    +  Y +  TVHANL++
Sbjct: 69  QIRVGSNYPDKRGARVSVLTYSDSPTVHANLSD 101


>Z92782-3|CAB07189.2|  326|Caenorhabditis elegans Hypothetical
           protein F14F8.4 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -2

Query: 279 HIYVAQSIRQR-HFFTYRHCFFHNYLSRKNS*ARTDKLSFVNSVVIIYDAKNVWYY*LLL 103
           +I V  +++Q  H  + +H +  NY+  ++      KL  V S +   + +N W Y +++
Sbjct: 207 YIPVILNMKQNGHLHSQQHIYLQNYIFLQSLLVLLSKLVSVPSFLSYIEIRNPWSYLVII 266

Query: 102 IL---VNYPFLVQ 73
            +   V  P ++Q
Sbjct: 267 SIGDAVTIPLIIQ 279


>U58751-6|AAZ82854.1|  131|Caenorhabditis elegans Hypothetical
           protein C07G1.8 protein.
          Length = 131

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
 Frame = +1

Query: 394 GIAKYIEEATVHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYER---T 564
           G A    + T+  +  +++EE   HAV+LYT   C   + + ++    D +H  E+   T
Sbjct: 3   GSASTPPKPTLSEHSKKIVEEVKEHAVVLYTKDGCGYCV-KAKNELYEDGIHYTEKNLNT 61

Query: 565 VQVLAPEVDKLLQ 603
           V  + P   + +Q
Sbjct: 62  VSKVIPNPQEYIQ 74


>Z81560-5|CAB04550.2|  123|Caenorhabditis elegans Hypothetical
           protein K02E2.6 protein.
          Length = 123

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -2

Query: 444 LVQVGVDGRFLYVLCDTG 391
           +VQVGV+G+ ++VL DTG
Sbjct: 28  VVQVGVNGKVVHVLLDTG 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,844,490
Number of Sequences: 27780
Number of extensions: 318361
Number of successful extensions: 981
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)