Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P28_F_L12
(933 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 279 3e-75
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 279 3e-75
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 94 1e-19
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 37 0.024
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 37 0.024
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 37 0.024
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 4.8
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 279 bits (683), Expect = 3e-75
Identities = 136/236 (57%), Positives = 170/236 (72%), Gaps = 1/236 (0%)
Frame = +1
Query: 160 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 339
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 340 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 519
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 520 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 696
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 697 RVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKRGAAVI 864
VIIWGNHS TQFPD ++A G + + D+A+L+G F+ TVQKRG +I
Sbjct: 181 NVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVGDNAFLQGPFIATVQKRGGVII 236
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 279 bits (683), Expect = 3e-75
Identities = 136/236 (57%), Positives = 170/236 (72%), Gaps = 1/236 (0%)
Frame = +1
Query: 160 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 339
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 340 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 519
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 520 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 696
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 697 RVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIINDDAYLKGAFVTTVQKRGAAVI 864
VIIWGNHS TQFPD ++A G + + D+A+L+G F+ TVQKRG +I
Sbjct: 181 NVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVGDNAFLQGPFIATVQKRGGVII 236
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 94.3 bits (224), Expect = 1e-19
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +1
Query: 622 MTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQFPDASNAVAIVGGAQKSVSEIIN 801
MTRLD NRA +QLA K G + +VK VIIWGNHS TQFPD ++A G + +
Sbjct: 1 MTRLDHNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHATVNKNGTETDAYAAVG 60
Query: 802 DDAYLKGAFVTTVQKRGAAVI 864
D+A+L+G F+ TVQKRG +I
Sbjct: 61 DNAFLQGPFIATVQKRGGVII 81
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.024
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 433 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 612
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 613 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 729
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.024
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 433 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 612
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 613 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 729
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.024
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 433 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 612
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 613 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 729
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 35.9 bits (79), Expect = 0.041
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +3
Query: 168 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 311
TYK C ++C CI T+L++ C SS STTC P + YC YDG T
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509
Query: 312 RCCHGVGRLCSATFGWGSS 368
CC CS ++ G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 490 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 669
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 4.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 490 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 669
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 548 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 384
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 383 SGFAVGRTPAKSGRAQSANSMTTPSSTP 300
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 548 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 384
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 383 SGFAVGRTPAKSGRAQSANSMTTPSSTP 300
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 548 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 384
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 383 SGFAVGRTPAKSGRAQSANSMTTPSSTP 300
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,835,886
Number of Sequences: 27780
Number of extensions: 422300
Number of successful extensions: 1415
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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