Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P28_F_L11
         (659 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0025 + 25018426-25018596,25018692-25018892,25018983-250192...    49   4e-06
01_06_0876 - 32654209-32654238,32654357-32654672,32654833-326549...    43   2e-04
07_03_1690 - 28716998-28717091,28717203-28717897,28718264-287184...    29   2.5  
12_01_1041 - 10711362-10711428,10711571-10712262,10712622-107127...    28   7.6  

>05_06_0025 +
           25018426-25018596,25018692-25018892,25018983-25019236,
           25019468-25019540,25019659-25019715,25020219-25020298,
           25020386-25020448,25020678-25020765,25021055-25021156,
           25021296-25021369,25021690-25021754,25021933-25022096,
           25022179-25022246,25022337-25022397,25022729-25022766,
           25023154-25023329,25023747-25023859,25023944-25023955
          Length = 619

 Score = 48.8 bits (111), Expect = 4e-06
 Identities = 22/44 (50%), Positives = 31/44 (70%)
 Frame = +1

Query: 376 ISESEIGITEYISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           ++E+E GIT + S   GF G++K RYSDF V E+  DG +A+LT
Sbjct: 7   LTEAEAGITCFASSLPGFRGVLKHRYSDFIVHEVARDGSVARLT 50


>01_06_0876 -
           32654209-32654238,32654357-32654672,32654833-32654901,
           32655238-32655275,32655418-32655478,32655550-32655617,
           32655729-32655889,32656687-32656751,32656883-32656956,
           32658158-32658245,32658800-32658879,32659168-32659224,
           32659332-32659404,32659524-32659762,32659846-32660025,
           32660150-32660440
          Length = 629

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +1

Query: 376 ISESEIGITEYISDHKGFIGIIKWRYSDFQVSEINEDGVIAKLT 507
           +SE ++GI+ + S   GF G +K RYSDF V E+  DG + +LT
Sbjct: 46  LSEPDVGISLFASALPGFRGALKQRYSDFVVHEVALDGSLVRLT 89


>07_03_1690 -
           28716998-28717091,28717203-28717897,28718264-28718446,
           28718552-28719585,28719805-28719978,28720051-28720168,
           28720339-28720521,28720647-28720739,28720981-28721166,
           28722247-28722507
          Length = 1006

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 17  HMACLKTYLKQILVIYLFSKLQKTMHPLLSTVETIL 124
           H   + TY  ++LV+Y+F+   K++H  L  +   L
Sbjct: 212 HRGLISTYALEVLVLYIFNIFHKSLHSPLEVLYKFL 247


>12_01_1041 -
           10711362-10711428,10711571-10712262,10712622-10712777,
           10712885-10713957,10714422-10714524,10714694-10714876,
           10715007-10715099,10715379-10715564,10716530-10716793
          Length = 938

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 17  HMACLKTYLKQILVIYLFSKLQKTMHPLLSTVETIL 124
           H   L TY  + LV+Y+F+   K++H  L  +   L
Sbjct: 213 HHGLLSTYALETLVLYIFNIFHKSLHGPLEALYKFL 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,299,770
Number of Sequences: 37544
Number of extensions: 243927
Number of successful extensions: 459
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)